FC929471

Overview
NameFC929471
Unique NameFC929471
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length815
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: KSG9_ARATH (Shaggy-related protein kinase iota OS=Arabidopsis thaliana GN=ASK9 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.414e-26
Identity = 71/213 (33.33%), Postives = 121/213 (56.81%), Query Frame = 1
Query:  208 PSVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-----EKKLYLVFEYLDLDLKKHMDSCPDFANDPRL----IKTFLYQILRGIAYCHS-HRVLHRDLKPQNLLIDRRTNALKLADFGLARAF--GIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            P     Y     +G G++G+V++A+   T E++A+KK+  ++  +       RE+ L++ M H N++ L+    S     E  L LV EY+   L + +      +++ R+    +K + YQI RG+AY H+   V HRD+KPQNLL+D  T+ +KL DFG A+    G P  ++   + + +YRAPE++ G+  Y+  +D+WS GC+ AE++
Sbjct:   64 PKQTISYMAERVVGTGSFGIVFQAKCLETGESVAIKKVLQDRRYKN------RELQLMRPMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETLYRVLRHYT--SSNQRMPIFYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTASIDIWSAGCVLAELL 265          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: STK36_MOUSE (Serine/threonine-protein kinase 36 OS=Mus musculus GN=Stk36 PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.153e-26
Identity = 69/195 (35.38%), Postives = 106/195 (54.36%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            KY  +E IGEG++G VYK R   + + +ALK I      E       REI +++ + H NIV + D   ++K++ +V +Y + +L + ++       D   ++    Q++  + Y HSHR+LHRD+KPQN+L+  +   +KL DFG ARA        T    T  Y +PE L+  R Y    D+WSVGCI  E+
Sbjct:    3 KYHVLEMIGEGSFGRVYKGRKKYSAQVVALKFIPKLGRSEKELRNLQREIEIMRGLWHPNIVHMLDSFETDKEVVVVTDYAEGELFQILEDDGKLPEDQ--VQAIAAQLVSALYYLHSHRILHRDMKPQNILL-AKGGGIKLCDFGFARAMSTNTMVLTSIKGTPLYMSPE-LVEERPYDHTADLWSVGCILYEL 193          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: KSG6_ARATH (Shaggy-related protein kinase zeta OS=Arabidopsis thaliana GN=ASK6 PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.153e-26
Identity = 74/214 (34.58%), Postives = 117/214 (54.67%), Query Frame = 1
Query:  208 PSVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-----EKKLYLVFEYLDLDLK---KHMDSC----PDFANDPRLIKTFLYQILRGIAYCHSHR-VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            P     Y     +G G++G+V++A+   T E++A+KK+  ++  +       RE+ L++ M H N+V L+    S     E  L LV EY+   L    KH  S     P F      +K + YQI RG+AY H+   V HRD+KPQNLL+D  T+  KL DFG A+         ++ + + +YRAPE++ G+  Y++ +D+WS GC+ AE++
Sbjct:   66 PKQTISYMAERVVGTGSFGIVFQAKCLETGESVAIKKVLQDRRYKN------RELQLMRLMDHPNVVSLKHCFFSTTTRDELFLNLVMEYVPETLYRVLKHYTSSNQRMPIF-----YVKLYTYQIFRGLAYIHTAPGVCHRDVKPQNLLVDPLTHQCKLCDFGSAKVLVKGEANISY-ICSRYYRAPELIFGATEYTSSIDIWSAGCVLAELL 267          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CSK22_CHICK (Casein kinase II subunit alpha' OS=Gallus gallus PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.153e-26
Identity = 69/207 (33.33%), Postives = 120/207 (57.97%), Query Frame = 1
Query:  208 PSVGSK--YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            PS G++  Y+ V K+G G Y  V++A N   NE + +K ++  ++ +       RE+ +L+ ++ G NI+ L D V     K   LVFEY++  D K+      DF      I+ ++Y++L+ + YCHS  ++HRD+KP N++ID +   L+L D+GLA  F  P + +   V + +++ PE+L+  + Y   +D+WS+GC+ A M+
Sbjct:   32 PSWGNQDDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKK-----IKREVKILENLRGGTNIINLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFD-----IRFYMYELLKALDYCHSMGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 227          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: MK04_RAT (Mitogen-activated protein kinase 4 (Fragment) OS=Rattus norvegicus GN=Mapk4 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.118e-26
Identity = 73/205 (35.61%), Postives = 111/205 (54.15%), Query Frame = 1
Query:  247 GEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKK-----------LYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHE------VVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            G G  G+V  A +      +A+KKI L   D      A+REI +++ + H NIV++ +V+  +              Y+V EY++ DL   ++         +L   F+YQ+LRG+ Y HS  VLHRDLKP N+ I      LK+ DFGLAR   I  + ++H+      +VT WYR+P +LL   +Y+  +D+W+ GCI AEM+
Sbjct:    1 GCGGNGLVLSATDSRACRKVAVKKIVLS--DARSMKHALREIKIIRRLDHDNIVKVYEVLGPKGSDLQGELFKFSVAYIVQEYMETDLACLLEQGTLTEEHAKL---FMYQLLRGLKYIHSANVLHRDLKPANIFISTEDLVLKIGDFGLAR---IADQHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCILAEML 197          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDKF2_ORYSJ (Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica GN=CDKF-2 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.379e-26
Identity = 80/214 (37.38%), Postives = 123/214 (57.48%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLE---QEDEGVPSTAIREISLLKEMQ-HGNIVRLQDVVHSEKK-------LYLVFEYLD-------LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +YE + KIGEG  GVV+ AR+  T ET+A+K++       E+E      +RE   L+  + H ++V L+   H E +        Y+V EY+D       +  ++     P+ A   RL++    Q+L G+A  H+  V+HRDLKP N+++  R + LK+ DFG++R        +T  VVTLWYRAPE++LGS+ Y + VD WS+GCI AE++
Sbjct:    3 RYECLGKIGEGAAGVVHVARDRTTGETVAVKRLHGGIGCGEEEW-----LREARCLQACRGHPHLVELR-AAHREMRRGGGGACCYVVMEYVDGPSLSRVVREERRGRPFPE-AEARRLMR----QLLDGVAAMHAAGVMHRDLKPDNVVVGPRGD-LKICDFGMSRVTAAGAPPYTSPVVTLWYRAPELILGSQEYDSLVDTWSLGCIMAELL 204          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CSK2A_THEPA (Casein kinase II subunit alpha OS=Theileria parva GN=TP04_0659 PE=3 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 7.025e-26
Identity = 66/203 (32.51%), Postives = 117/203 (57.64%), Query Frame = 1
Query:  211 SVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHSEKKLY--LVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +V   YE V KIG G +  V++  N VT +   +K ++  ++ +       REI +L+ ++ G NI++L D+V   +     L+FE+++    K +       +    IK ++YQ+L+ + YCHS  ++HRD+KP N++ID     L+L D+GLA  F  P + ++  V T +Y+ PE+L+  R+Y   +D+WS+GC+ A ++
Sbjct:   50 NVPDSYEIVRKIGRGKFSEVFEGINTVTKDKCVIKILKPVKKKK-----IKREIKILQNLRGGPNIIKLLDIVKDPQSRTPSLIFEHVNNTDFKTLYPTLSIQD----IKYYIYQLLKAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAE-FYHPEQEYSVRVATRYYKGPELLVDMRYYDYSLDIWSIGCMLAGII 242          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CSK2A_THEAN (Casein kinase II subunit alpha OS=Theileria annulata GN=TA10630 PE=3 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 7.025e-26
Identity = 66/203 (32.51%), Postives = 117/203 (57.64%), Query Frame = 1
Query:  211 SVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHSEKKLY--LVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +V   YE V KIG G +  V++  N VT +   +K ++  ++ +       REI +L+ ++ G NI++L D+V   +     L+FE+++    K +       +    IK ++YQ+L+ + YCHS  ++HRD+KP N++ID     L+L D+GLA  F  P + ++  V T +Y+ PE+L+  R+Y   +D+WS+GC+ A ++
Sbjct:   50 NVPDSYEIVRKIGRGKFSEVFEGLNTVTKDKCVIKILKPVKKKK-----IKREIKILQNLRGGPNIIKLLDIVKDPQSRTPSLIFEHVNNTDFKTLYPTLTIQD----IKYYIYQLLKAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAE-FYHPEQEYSVRVATRYYKGPELLVDMRYYDYSLDIWSIGCMLAGII 242          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CSK2A_MAIZE (Casein kinase II subunit alpha OS=Zea mays GN=ACK2 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.198e-25
Identity = 67/199 (33.67%), Postives = 115/199 (57.79%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHSE--KKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            YE V K+G G Y  V++  N   NE   +K ++  ++ +       REI +L+ +  G NIV+L D+V  +  K   L+FEY++  D K    +  D+      I+ ++Y++L+ + YCHS  ++HRD+KP N++ID     L+L D+GLA  F  P + +   V + +++ PE+L+  + Y   +D+WS+GC+FA M+
Sbjct:   34 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKK-----IKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYD-----IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 221          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CSK2A_ENCCU (Probable casein kinase II subunit alpha homolog OS=Encephalitozoon cuniculi GN=CKA1 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.565e-25
Identity = 67/199 (33.67%), Postives = 116/199 (58.29%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVV-HSEKKLY-LVFEYLDLDLKKHMDSCPDFAN-DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            KY+  +++G G Y  V++ R     E I +K ++  ++     +   RE+ +L+ + H NI++L DVV   E ++Y L+FEY++     H D    F     + I  +  QIL  ++YCHS  ++HRD+KPQN++I++    LK+ D+GLA  F  P + ++  V + +Y+ PE+L+   +Y   +D+WS GC+ AE+V
Sbjct:   36 KYQIYQRMGRGKYSEVFEGRK--DREKIVIKALKPVRK-----AKICREVLILRNLSHKNIIKLMDVVVDPESQIYSLIFEYIE-----HEDYAKIFEKLCYKDIVEYSRQILSALSYCHSMGIIHRDIKPQNMVINQARRELKIIDWGLAE-FYHPKKEYSVRVASRYYKGPELLVDYPYYDYSLDIWSFGCVLAELV 221          
The following BLAST results are available for this feature:
BLAST of FC929471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KSG9_ARATH2.414e-2633.33Shaggy-related protein kinase iota OS=Arabidopsis ... [more]
STK36_MOUSE3.153e-2635.38Serine/threonine-protein kinase 36 OS=Mus musculus... [more]
KSG6_ARATH3.153e-2634.58Shaggy-related protein kinase zeta OS=Arabidopsis ... [more]
CSK22_CHICK3.153e-2633.33Casein kinase II subunit alpha' OS=Gallus gallus P... [more]
MK04_RAT4.118e-2635.61Mitogen-activated protein kinase 4 (Fragment) OS=R... [more]
CDKF2_ORYSJ5.379e-2637.38Putative cyclin-dependent kinase F-2 OS=Oryza sati... [more]
CSK2A_THEPA7.025e-2632.51Casein kinase II subunit alpha OS=Theileria parva ... [more]
CSK2A_THEAN7.025e-2632.51Casein kinase II subunit alpha OS=Theileria annula... [more]
CSK2A_MAIZE1.198e-2533.67Casein kinase II subunit alpha OS=Zea mays GN=ACK2... [more]
CSK2A_ENCCU1.565e-2533.67Probable casein kinase II subunit alpha homolog OS... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2CE06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2CE06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929471 ID=FC929471; Name=FC929471; organism=Citrus clementina; type=EST; length=815bp
GGCACGAGGCTAAAACTCACTTCTTTCACCGCCGCCGCTGCCTCCAATCA
CCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATCGTCCTCGCG
TCTGTTACTGTATTATGCATTTGTATTTTTCTCTTTCGTAAGCGGTTAAT
TTTTTCTTCATAACACACTGCCGCCACCTACGCCGTCGATTCGTGCCGTT
CTTGTCGCCGTCCGTCGGTAGCAAGTATGAAAAGGTTGAGAAGATTGGTG
AAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAATGAG
ACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTGTGCC
TAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCATGGGA
ACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTATCTG
GTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTTGCCC
AGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAAATTC
TACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGATTTG
AAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGCTTGC
AGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTTACAC
ATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGGATCT
CGCCATTACTCTACTCCAGTTGATGTGTGGTCGGTGGGATGTATATTTGC
TGAGATGGTGAACCA
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