FC929471

Overview
NameFC929471
Unique NameFC929471
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length815
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: MSK1_MEDSA (Glycogen synthase kinase-3 homolog MsK-1 OS=Medicago sativa GN=MSK-1 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.044e-25
Identity = 71/211 (33.65%), Postives = 116/211 (54.98%), Query Frame = 1
Query:  208 PSVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-----EKKLYLVFEYLDLDLKKHMDSCPDFANDPRLI--KTFLYQILRGIAYCHSH-RVLHRDLKPQNLLIDRRTNALKLADFGLARAF--GIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            P     Y     +G G++GVV++A+   T ET+A+KK+  ++  +       RE+  ++ + H N+V L+    S     E  L LV EY+   + + +           +I  K + YQI R ++Y H    V HRD+KPQNLL++  T+ +KL DFG A+    G P  ++   + + +YRAPE++ G+  Y+T +DVWSVGC+ AE++
Sbjct:   69 PKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYSKLNQRMPMIYVKLYTYQIFRALSYIHRCIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAIDVWSVGCVLAELL 270          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: NLK_CAEBR (Serine/threonine kinase NLK OS=Caenorhabditis briggsae GN=lit-1 PE=3 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.669e-25
Identity = 61/123 (49.59%), Postives = 83/123 (67.48%), Query Frame = 1
Query:  445 YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR-TFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            Y++ E +  DL K + S      D   +K F+YQILRG+ Y H+  +LHRD+KP NLL++     LK+ DFGLAR +    R   THEVVT +YRAPE+L+G+R Y+  VD+WSVGCIFAE++
Sbjct:  343 YVLTELMQSDLHKIIVSPQTLTIDH--VKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNC-ILKICDFGLARTWDSRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELL 462          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: KSG5_ARATH (Shaggy-related protein kinase epsilon OS=Arabidopsis thaliana GN=ASK5 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.669e-25
Identity = 70/203 (34.48%), Postives = 115/203 (56.65%), Query Frame = 1
Query:  244 IGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-----EKKLYLVFEYLD---LDLKKHMDSCPDFANDPR---LIKTFLYQILRGIAYCHSH-RVLHRDLKPQNLLIDRRTNALKLADFGLARAF--GIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +G+G++G+V++A+   T ET+A+KK+  ++  +       RE+  ++ + H N+V L+    S     E  L LV EY+      + KH       AN       +K + YQI R +AY H    V HRD+KPQNLL++  T+ +KL DFG A+    G P  ++   + + +YRAPE++ G+  Y+T +D+WS GC+ AE++
Sbjct:   80 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVYRVSKHYSR----ANQRMPIIYVKLYTYQICRALAYIHGGVGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTTIDIWSAGCVLAELL 269          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CSK22_ARATH (Casein kinase II subunit alpha-2 OS=Arabidopsis thaliana GN=CKA2 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.669e-25
Identity = 67/199 (33.67%), Postives = 115/199 (57.79%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHSE--KKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            YE V K+G G Y  V++  N   NE   +K ++  ++ +       REI +L+ +  G NIV+L DVV  +  K   L+FEY++  D K    +  D+      I+ ++Y++L+ + +CHS  ++HRD+KP N++ID     L+L D+GLA  F  P + +   V + +++ PE+L+  + Y   +D+WS+GC+FA M+
Sbjct:   34 YEVVRKVGRGKYSEVFEGINMNNNEKCIIKILKPVKKKK-----IRREIKILQNLCGGPNIVKLLDVVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD-----IRYYIYELLKALDFCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 221          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: MSK1_TOBAC (Shaggy-related protein kinase NtK-1 OS=Nicotiana tabacum GN=NTK-1 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.486e-25
Identity = 69/200 (34.50%), Postives = 116/200 (58.00%), Query Frame = 1
Query:  244 IGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-----EKKLYLVFEYLDLDLK---KHMDSCPDFANDPRLIKTFLYQILRGIAYCH-SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF--GIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +G+G++GVV++A+   T ET+A+KK+  ++  +       RE+  ++ + H N+V L+    S     E  L LV EY+   +    KH +          L+K + YQI R ++Y H +  V HRD+KPQNLL++  T+ +KL DFG A+    G P  ++   + + +YRAPE++ G+  Y+T +D+WS GC+ AE++
Sbjct:   79 VGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVCLKHCFFSTTEKDEVYLNLVLEYVPETVHRVIKHYNKLNQ-RMPLILVKLYTYQIFRALSYIHHTIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAIDIWSAGCVLAELL 268          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: GLKA_DICDI (Probable serine/threonine-protein kinase glkA OS=Dictyostelium discoideum GN=glkA PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.486e-25
Identity = 67/199 (33.67%), Postives = 117/199 (58.79%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS----EKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            YE ++++G+GT+G VY+A+N   N+ +A+KK+  E+ +  +     RE  +LK + H N +R+ D+ ++    +K   LVF+++   L   +       N    IK   YQ+ + I + HS  + HRD+ P N+L+  +   L LADFG A+       + ++ + + +YRAPE+L+G  +Y+T +D+WS+GCI AEM+
Sbjct:   91 YEIIKQVGQGTFGKVYEAKN-QDNKRVAIKKV--EKSNHFIS----REYDILKIVAHPNCLRILDMFYTAEDNKKMQNLVFDFIPYTLASLLKKRQLSIN---FIKVLFYQLCQAIKHIHSKAICHRDITPNNILLSSK-GELTLADFGSAKILESNHTSMSY-ICSRYYRAPELLVGCSNYTTKIDIWSIGCILAEML 277          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDC15_YEAST (Cell division control protein 15 OS=Saccharomyces cerevisiae GN=CDC15 PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 3.486e-25
Identity = 71/196 (36.22%), Postives = 107/196 (54.59%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +Y   + IG G+YGVVYKA N  T++ +A+K++  E ++E   +  + EISLLK + H NIV+    +    +LY++ EY      + + S           KT++ Q L G+ Y H   V+HRD+K  N+L+    N +KLADFG++        T      TL + APEI LG+R  ST  D+WS+G    EM+
Sbjct:   24 QYHLKQVIGRGSYGVVYKAINKHTDQVVAIKEVVYENDEE--LNDIMAEISLLKNLNHNNIVKYHGFIRKSYELYILLEYCANGSLRRLISRSSTGLSENESKTYVTQTLLGLKYLHGEGVIHRDIKAANILLS-ADNTVKLADFGVSTIVNSSALTLAG---TLNWMAPEI-LGNRGASTLSDIWSLGATVVEML 212          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: PIT1_SCHPO (Sporulation protein kinase pit1 OS=Schizosaccharomyces pombe GN=pit1 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.553e-25
Identity = 70/208 (33.65%), Postives = 121/208 (58.17%), Query Frame = 1
Query:  211 SVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREI-SLLKEMQHGNIVRLQDV-VHSEKKLYLVFEYLDLDLKKHMDSCPDFANDP---RLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNA----LKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            S+   Y  V K+G+GT+G VY A     ++ +   K   ++  +   +T +RE+ SLL+  ++ NIV + D+ +   + L++V E+LD +L + + +     NDP     ++  + QI +G+ + H++   HRD+KP+N+LI   +++    +K+ADFGLAR        +T  V T WYRAPE+LL   +YS PVD+++ GC+  E+
Sbjct:   31 SIDEVYNVVRKVGDGTFGSVYLATTKTPSKEVVAIKSMKKKLAKVSDATRLREVHSLLRLSENENIVNIFDLYIDQFRCLHIVMEFLDCNLYQLISTRK---NDPLTLEQVQDIMRQIFKGLNHIHTNGFFHRDMKPENILISSNSDSSSFNVKIADFGLAREINSRP-PYTEYVSTRWYRAPELLLRDSYYSFPVDIYAAGCMAFEI 234          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: MSK3_MEDSA (Glycogen synthase kinase-3 homolog MsK-3 OS=Medicago sativa GN=MSK-3 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 4.553e-25
Identity = 70/211 (33.18%), Postives = 115/211 (54.50%), Query Frame = 1
Query:  208 PSVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-----EKKLYLVFEYLDLDLKKHMDSCPDFANDPRLI--KTFLYQILRGIAYCH-SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF--GIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            P     Y     +G G++GVV++A+   T ET+A+KK+  ++  +       RE+  ++ + H N+V L+    S     E  L LV EY+   + + +           +I  K + YQI R +AY H S  V HRD+KPQNLL++  T+ LK+ DFG A+    G P  ++   + + +YRAPE++ G+  Y+T +D+WS GC+  E++
Sbjct:   68 PKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVSRVIRHYNKMNQRMPMIYVKLYSYQICRALAYIHNSIGVCHRDIKPQNLLVNPHTHQLKICDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAIDIWSAGCVLGELL 269          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: KSG1_ARATH (Shaggy-related protein kinase alpha OS=Arabidopsis thaliana GN=ASK1 PE=2 SV=3)

HSP 1 Score: 115.161 bits (287), Expect = 4.553e-25
Identity = 71/211 (33.65%), Postives = 115/211 (54.50%), Query Frame = 1
Query:  208 PSVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-----EKKLYLVFEYLDLDLKKHMDSCPDFANDPRLI--KTFLYQILRGIAYCHSH-RVLHRDLKPQNLLIDRRTNALKLADFGLARAF--GIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            P     Y     +G G++GVV++A+   T ET+A+KK+  ++  +       RE+  ++ + H N+V L+    S     E  L LV EY+   + + +           LI  K + YQI R ++Y H    V HRD+KPQNLL++  T+ +KL DFG A+    G P  ++   + + +YRAPE++ G+  Y+T +DVWS GC+ AE++
Sbjct:   63 PKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDRRYKN------RELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYNKLNQRMPLIYVKLYTYQIFRALSYIHRCIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAIDVWSAGCVLAELL 264          
The following BLAST results are available for this feature:
BLAST of FC929471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MSK1_MEDSA2.044e-2533.65Glycogen synthase kinase-3 homolog MsK-1 OS=Medica... [more]
NLK_CAEBR2.669e-2549.59Serine/threonine kinase NLK OS=Caenorhabditis brig... [more]
KSG5_ARATH2.669e-2534.48Shaggy-related protein kinase epsilon OS=Arabidops... [more]
CSK22_ARATH2.669e-2533.67Casein kinase II subunit alpha-2 OS=Arabidopsis th... [more]
MSK1_TOBAC3.486e-2534.50Shaggy-related protein kinase NtK-1 OS=Nicotiana t... [more]
GLKA_DICDI3.486e-2533.67Probable serine/threonine-protein kinase glkA OS=D... [more]
CDC15_YEAST3.486e-2536.22Cell division control protein 15 OS=Saccharomyces ... [more]
PIT1_SCHPO4.553e-2533.65Sporulation protein kinase pit1 OS=Schizosaccharom... [more]
MSK3_MEDSA4.553e-2533.18Glycogen synthase kinase-3 homolog MsK-3 OS=Medica... [more]
KSG1_ARATH4.553e-2533.65Shaggy-related protein kinase alpha OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2CE06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2CE06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929471 ID=FC929471; Name=FC929471; organism=Citrus clementina; type=EST; length=815bp
GGCACGAGGCTAAAACTCACTTCTTTCACCGCCGCCGCTGCCTCCAATCA
CCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATCGTCCTCGCG
TCTGTTACTGTATTATGCATTTGTATTTTTCTCTTTCGTAAGCGGTTAAT
TTTTTCTTCATAACACACTGCCGCCACCTACGCCGTCGATTCGTGCCGTT
CTTGTCGCCGTCCGTCGGTAGCAAGTATGAAAAGGTTGAGAAGATTGGTG
AAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAATGAG
ACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTGTGCC
TAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCATGGGA
ACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTATCTG
GTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTTGCCC
AGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAAATTC
TACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGATTTG
AAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGCTTGC
AGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTTACAC
ATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGGATCT
CGCCATTACTCTACTCCAGTTGATGTGTGGTCGGTGGGATGTATATTTGC
TGAGATGGTGAACCA
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