FC929471

Overview
NameFC929471
Unique NameFC929471
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length815
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CSK21_XENLA (Casein kinase II subunit alpha OS=Xenopus laevis GN=csnk2a1 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 4.553e-25
Identity = 65/199 (32.66%), Postives = 116/199 (58.29%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            Y+ V K+G G Y  V++A N   NE + +K ++  ++ +       REI +L+ ++ G NI+ L D+V     +   LVFE+++  D K+   +  D+      I+ ++Y+IL+ + YCHS  ++HRD+KP N++ID     L+L D+GLA  F  P + +   V + +++ PE+L+  + Y   +D+WS+GC+ A M+
Sbjct:   39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-----IKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-----IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CSK21_RAT (Casein kinase II subunit alpha OS=Rattus norvegicus GN=Csnk2a1 PE=1 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 4.553e-25
Identity = 65/199 (32.66%), Postives = 116/199 (58.29%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            Y+ V K+G G Y  V++A N   NE + +K ++  ++ +       REI +L+ ++ G NI+ L D+V     +   LVFE+++  D K+   +  D+      I+ ++Y+IL+ + YCHS  ++HRD+KP N++ID     L+L D+GLA  F  P + +   V + +++ PE+L+  + Y   +D+WS+GC+ A M+
Sbjct:   39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-----IKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-----IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CSK21_MOUSE (Casein kinase II subunit alpha OS=Mus musculus GN=Csnk2a1 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.553e-25
Identity = 65/199 (32.66%), Postives = 116/199 (58.29%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            Y+ V K+G G Y  V++A N   NE + +K ++  ++ +       REI +L+ ++ G NI+ L D+V     +   LVFE+++  D K+   +  D+      I+ ++Y+IL+ + YCHS  ++HRD+KP N++ID     L+L D+GLA  F  P + +   V + +++ PE+L+  + Y   +D+WS+GC+ A M+
Sbjct:   39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-----IKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-----IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CSK21_HUMAN (Casein kinase II subunit alpha OS=Homo sapiens GN=CSNK2A1 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.553e-25
Identity = 65/199 (32.66%), Postives = 116/199 (58.29%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            Y+ V K+G G Y  V++A N   NE + +K ++  ++ +       REI +L+ ++ G NI+ L D+V     +   LVFE+++  D K+   +  D+      I+ ++Y+IL+ + YCHS  ++HRD+KP N++ID     L+L D+GLA  F  P + +   V + +++ PE+L+  + Y   +D+WS+GC+ A M+
Sbjct:   39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-----IKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-----IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CSK21_CHICK (Casein kinase II subunit alpha OS=Gallus gallus GN=CSNK2A1 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.553e-25
Identity = 65/199 (32.66%), Postives = 116/199 (58.29%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            Y+ V K+G G Y  V++A N   NE + +K ++  ++ +       REI +L+ ++ G NI+ L D+V     +   LVFE+++  D K+   +  D+      I+ ++Y+IL+ + YCHS  ++HRD+KP N++ID     L+L D+GLA  F  P + +   V + +++ PE+L+  + Y   +D+WS+GC+ A M+
Sbjct:   39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-----IKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-----IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CSK21_BOVIN (Casein kinase II subunit alpha OS=Bos taurus GN=CSNK2A1 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.553e-25
Identity = 65/199 (32.66%), Postives = 116/199 (58.29%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            Y+ V K+G G Y  V++A N   NE + +K ++  ++ +       REI +L+ ++ G NI+ L D+V     +   LVFE+++  D K+   +  D+      I+ ++Y+IL+ + YCHS  ++HRD+KP N++ID     L+L D+GLA  F  P + +   V + +++ PE+L+  + Y   +D+WS+GC+ A M+
Sbjct:   39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-----IKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-----IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: KSG3_ARATH (Shaggy-related protein kinase gamma OS=Arabidopsis thaliana GN=ASK3 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.947e-25
Identity = 70/211 (33.18%), Postives = 115/211 (54.50%), Query Frame = 1
Query:  208 PSVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-----EKKLYLVFEYLDLDLKKHMDSCPDFANDPRLI--KTFLYQILRGIAYCHSH-RVLHRDLKPQNLLIDRRTNALKLADFGLARAF--GIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            P     Y     +G G++GVV++A+   T ET+A+KK+  ++  +       RE+  ++ + H N+V L+    S     E  L LV EY+   + + +           L+  K + YQI R ++Y H    V HRD+KPQNLL++  T+ +KL DFG A+    G P  ++   + + +YRAPE++ G+  Y+T +DVWS GC+ AE++
Sbjct:   67 PKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDRRYKN------RELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYNKLNQRMPLVYVKLYTYQIFRSLSYIHRCIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAIDVWSAGCVLAELL 268          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK20_MACMU (Cell division protein kinase 20 OS=Macaca mulatta GN=CDK20 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.947e-25
Identity = 64/160 (40.00%), Postives = 102/160 (63.75%), Query Frame = 1
Query:  241 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-QHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP-VRTFTHEVVT 714
            +IGEG +G+V+KA++  T E +ALKK+ L + ++G P+ A+REI  L+EM  +  +V+L+ V        L FE++  DL + +          + +K++L  +L+G+A+CH++ ++HRDLKP NLLI   +  LK+ADFGLAR F     R +TH+V T
Sbjct:    9 RIGEGAHGIVFKAKHVETGEIVALKKVALRRLEDGFPNQALREIKALQEMGDNQYVVQLKAVFPHGGGFVLAFEFMLSDLAEVVRHAQRPLAQAQ-VKSYLQMLLKGVAFCHANNIVHRDLKPANLLIS-ASGQLKIADFGLARVFSPDGSRLYTHQVAT 166          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: Y8487_DICDI (Probable cyclin-dependent serine/threonine-protein kinase DDB_G0278487 OS=Dictyostelium discoideum GN=DDB_G0278487 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.767e-25
Identity = 73/206 (35.44%), Postives = 111/206 (53.88%), Query Frame = 1
Query:  214 VGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH-GNIVRLQDVVHS--EKKLYLVFEYLDLDLK----KHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +   YE + KIGEG  G V+KA    T E +ALK  +   E +        E SLL++++H   I  + D+  +    +  +VF Y + DL     +H  S P        +K +  Q+L GI   H+  V+HRD+K  NLL++ +  +L + D G A ++      F+ +VVTLWYRAPE+LLGS  Y   +D+WS+GC+  E+V
Sbjct:   60 INDNYEIISKIGEGISGSVFKAIKKGTEEMVALKNFKGWTEGDRASK---EECSLLQQLRHIPYITPVIDIYTNFETSEYIIVFPYFEHDLSGLLSEHRLSIPQ-------VKCYFKQLLEGINEIHNAGVMHRDIKAANLLVNNK-GSLFIGDLGTATSY-TKRSVFSSKVVTLWYRAPELLLGSTQYGPEIDMWSIGCVLIELV 253          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CSK21_RABIT (Casein kinase II subunit alpha OS=Oryctolagus cuniculus GN=CSNK2A1 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.014e-24
Identity = 64/199 (32.16%), Postives = 116/199 (58.29%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVH--SEKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            Y+ V K+G G Y  V++A N   NE + +K ++  ++ +       REI +L+ ++ G NI+ L D+V   + +   L FE+++  D K+   +  D+      I+ ++Y+IL+ + YCHS  ++HRD+KP N++ID     L+L D+GLA  F  P + +   V + +++ PE+L+  + Y   +D+WS+GC+ A M+
Sbjct:   39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-----IKREIKILENLRGGPNIITLADIVKDPASRTPALAFEHVNNTDFKQLYQTLTDYD-----IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226          
The following BLAST results are available for this feature:
BLAST of FC929471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CSK21_XENLA4.553e-2532.66Casein kinase II subunit alpha OS=Xenopus laevis G... [more]
CSK21_RAT4.553e-2532.66Casein kinase II subunit alpha OS=Rattus norvegicu... [more]
CSK21_MOUSE4.553e-2532.66Casein kinase II subunit alpha OS=Mus musculus GN=... [more]
CSK21_HUMAN4.553e-2532.66Casein kinase II subunit alpha OS=Homo sapiens GN=... [more]
CSK21_CHICK4.553e-2532.66Casein kinase II subunit alpha OS=Gallus gallus GN... [more]
CSK21_BOVIN4.553e-2532.66Casein kinase II subunit alpha OS=Bos taurus GN=CS... [more]
KSG3_ARATH5.947e-2533.18Shaggy-related protein kinase gamma OS=Arabidopsis... [more]
CDK20_MACMU5.947e-2540.00Cell division protein kinase 20 OS=Macaca mulatta ... [more]
Y8487_DICDI7.767e-2535.44Probable cyclin-dependent serine/threonine-protein... [more]
CSK21_RABIT1.014e-2432.16Casein kinase II subunit alpha OS=Oryctolagus cuni... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2CE06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2CE06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929471 ID=FC929471; Name=FC929471; organism=Citrus clementina; type=EST; length=815bp
GGCACGAGGCTAAAACTCACTTCTTTCACCGCCGCCGCTGCCTCCAATCA
CCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATCGTCCTCGCG
TCTGTTACTGTATTATGCATTTGTATTTTTCTCTTTCGTAAGCGGTTAAT
TTTTTCTTCATAACACACTGCCGCCACCTACGCCGTCGATTCGTGCCGTT
CTTGTCGCCGTCCGTCGGTAGCAAGTATGAAAAGGTTGAGAAGATTGGTG
AAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAATGAG
ACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTGTGCC
TAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCATGGGA
ACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTATCTG
GTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTTGCCC
AGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAAATTC
TACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGATTTG
AAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGCTTGC
AGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTTACAC
ATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGGATCT
CGCCATTACTCTACTCCAGTTGATGTGTGGTCGGTGGGATGTATATTTGC
TGAGATGGTGAACCA
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