FC929471

Overview
NameFC929471
Unique NameFC929471
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length815
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15041 contig Ccv1_Contig15041:1..815. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CSK21_ARATH (Casein kinase II subunit alpha-1 OS=Arabidopsis thaliana GN=CKA1 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.014e-24
Identity = 66/199 (33.17%), Postives = 115/199 (57.79%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHSE--KKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            YE V K+G G Y  V++  N  + E   +K ++  ++ +       REI +L+ +  G NIV+L DVV  +  K   L+FEY++  D K    +  D+      I+ ++Y++L+ + +CHS  ++HRD+KP N++ID     L+L D+GLA  F  P + +   V + +++ PE+L+  + Y   +D+WS+GC+FA M+
Sbjct:   34 YEVVRKVGRGKYSEVFEGINVNSKEKCIIKILKPVKKKK-----IRREIKILQNLCGGPNIVKLLDVVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD-----IRYYIYELLKALDFCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 221          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: BRSK2_MOUSE (BR serine/threonine-protein kinase 2 OS=Mus musculus GN=Brsk2 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.014e-24
Identity = 69/202 (34.16%), Postives = 113/202 (55.94%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYL------DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCI-FAEMV 810
            Y   + +G+G  G+V    +CVT + +A+K +  E+  E V     REI++LK ++H ++++L DV  ++K LYLV E++      D  +KK   +       P+  + F  QI+  + +CHSH + HRDLKP+NLL+D R N +++ADFG+A +  +          +  Y  PE++ G ++     DVWS G I FA +V
Sbjct:   20 YRLEKTLGKGQTGLVKLGIHCVTCQKVAIKIVNREKLSESVLMKVEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLT-------PKEARKFFRQIISALDFCHSHSICHRDLKPENLLLDERNN-IRIADFGMA-SLQVGDSLLETSCGSPHYACPEVIRGEKYDGRKADVWSCGVILFALLV 212          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: KSG4_ARATH (Shaggy-related protein kinase delta OS=Arabidopsis thaliana GN=ASK4 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.325e-24
Identity = 68/199 (34.17%), Postives = 116/199 (58.29%), Query Frame = 1
Query:  244 IGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-----EKKLYLVFEYLDLDLKKHMDSCPDFANDPRLI--KTFLYQILRGIAYCHSHRVL-HRDLKPQNLLIDRRTNALKLADFGLARAF--GIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +G G++G+V++A+   T E +A+KK+  ++  +       RE+ +++ + H N+V L+   +S     E  L LV E++   + +   S         LI  K + YQI RG+AY H+   L HRD+KPQNLL++  T+ LK+ DFG A+    G P  ++   + + +YRAPE++ G+  Y+T +D+WS GC+ AE++
Sbjct:   88 VGTGSFGMVFQAKCRETGEVVAIKKVLQDKRYKN------RELQIMQMLDHPNVVCLKHSFYSRTENEEVYLNLVLEFVPETVNRTARSYSRMNQLMPLIYVKLYTYQICRGLAYLHNCCGLCHRDIKPQNLLVNPHTHQLKICDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELL 277          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: MSK2_MEDSA (Glycogen synthase kinase-3 homolog MsK-2 OS=Medicago sativa GN=MSK-2 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.730e-24
Identity = 69/211 (32.70%), Postives = 116/211 (54.98%), Query Frame = 1
Query:  208 PSVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-----EKKLYLVFEYLDLDLKKHMDSCPDFANDPRLI--KTFLYQILRGIAYCHSH-RVLHRDLKPQNLLIDRRTNALKLADFGLARAF--GIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            P     Y     +G+G++GVV++A+   T ET+A+KK+  ++  +       RE+  ++ + H N+V L+    S     E  L LV E++   + + +           LI  K + YQI R +AY H+   V HRD+KPQNLL++  T+ LKL DFG A+    G P  ++   + + +YRAPE++ G+  Y++ +D+WS GC+  E++
Sbjct:   68 PKQTISYMAERAVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVTLKHCFFSTTEKDELYLNLVLEFVPETVHRVIRHYSKMNQRMPLIYVKLYSYQICRSLAYIHNCVGVSHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTSAIDIWSAGCVLGELL 269          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: KSG2_ARATH (Shaggy-related protein kinase beta OS=Arabidopsis thaliana GN=ASK2 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.730e-24
Identity = 68/202 (33.66%), Postives = 111/202 (54.95%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-----EKKLYLVFEYLDLDLKKHMDSCPDFANDPRLI--KTFLYQILRGIAYCHSH-RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            Y     IG G++GVV++A+   T E +A+KK+  ++  +       RE+ +++ + H N+V L+    S     E  L LV EY+   + +   S         LI  + + YQI R + Y H    V HRD+KPQNLL++  T+ +K+ DFG A+   IP       + + +YRAPE++ G+  Y++ +D+WSVGC+ AE+
Sbjct:  102 YRAEHVIGTGSFGVVFQAKCLETEEKVAIKKVLQDKRYKN------RELQIMRMLDHPNVVELKHSFFSTTEKDELYLNLVLEYVPETIYRASRSYTKMNQHMPLIYIQLYTYQICRAMNYLHQVVGVCHRDIKPQNLLVNNVTHEVKICDFGSAKML-IPGEPNISYICSRYYRAPELIFGATEYTSAIDMWSVGCVMAEL 296          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: BRSK2_HUMAN (BR serine/threonine-protein kinase 2 OS=Homo sapiens GN=BRSK2 PE=1 SV=3)

HSP 1 Score: 112.849 bits (281), Expect = 2.260e-24
Identity = 68/202 (33.66%), Postives = 113/202 (55.94%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYL------DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCI-FAEMV 810
            Y   + +G+G  G+V    +CVT + +A+K +  E+  E V     REI++LK ++H ++++L DV  ++K LYLV E++      D  +KK   +       P+  + F  QI+  + +CHSH + HRDLKP+NLL+D + N +++ADFG+A +  +          +  Y  PE++ G ++     DVWS G I FA +V
Sbjct:   19 YRLEKTLGKGQTGLVKLGVHCVTCQKVAIKIVNREKLSESVLMKVEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLT-------PKEARKFFRQIISALDFCHSHSICHRDLKPENLLLDEKNN-IRIADFGMA-SLQVGDSLLETSCGSPHYACPEVIRGEKYDGRKADVWSCGVILFALLV 211          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: MKC1_CANAL (Mitogen-activated protein kinase MKC1 OS=Candida albicans GN=MKC1 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.855e-24
Identity = 75/228 (32.89%), Postives = 118/228 (51.75%), Query Frame = 1
Query:  214 VGSKYEKVEKIGEGTYGVVYKAR-----------------NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ-HGNIVRLQDV-------VHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP----VRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            + S+++ V+++G G YG+V  A+                 +      +A+KKI        +   A+RE+ LL+  + H NI  L D+            ++YL  E ++ D+ + + S    ++     ++F+YQ+L G+ + HS  VLHRDLKP NLL++     LK+ DFGLAR F           T  V T WYRAPEI+L   +Y+  +D+WSVGCI AE++
Sbjct:   24 IDSRFKIVKELGHGAYGIVCSAKYDNGSKKVPDSNNGNASSSANASFVAIKKITNIFSKNILCKRALRELKLLQFFRGHKNITCLYDLDIIPNPMTGEFNEIYLYEELMECDMHQIIRSGQPLSDQH--YQSFIYQVLCGLNFIHSADVLHRDLKPGNLLVNADCE-LKICDFGLARGFSENPDENAGFMTEYVATRWYRAPEIMLSFTNYTKAIDIWSVGCILAELL 248          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: MDS1_YEAST (Serine/threonine-protein kinase MDS1/RIM11 OS=Saccharomyces cerevisiae GN=MDS1 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.855e-24
Identity = 69/215 (32.09%), Postives = 119/215 (55.35%), Query Frame = 1
Query:  196 PFLSPS--VGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVH---SEKKLYL--VFEYLDLDLKKHMDSCPDFAND-PRL-IKTFLYQILRGIAYCHSH-RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            P + P+  V   +   E +G G++GVV+      TNE +A+KK+  ++  +       RE+ ++K + H NI+ L+   +   S+ ++YL  + EY+   L + +           RL IK +++Q+ + + Y H    V HRD+KPQNLL+D  T +LKL DFG A+    P       + + +YRAPE++ G+ +Y+  +D+WS GC+ AE++
Sbjct:   27 PTIDPNDPVQISFPTTEVVGHGSFGVVFATVIQETNEKVAIKKVLQDKRFKN------RELEIMKMLSHINIIDLKYFFYERDSQDEIYLNLILEYMPQSLYQRLRHFVHQRTPMSRLEIKYYMFQLFKSLNYLHHFANVCHRDIKPQNLLVDPETWSLKLCDFGSAKQLK-PTEPNVSYICSRYYRAPELIFGATNYTNQIDIWSSGCVMAELL 234          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CSK2A_SPOFR (Casein kinase II subunit alpha OS=Spodoptera frugiperda PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.855e-24
Identity = 65/199 (32.66%), Postives = 115/199 (57.79%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            Y+ V K+G G Y  V++A N   NE   +K ++  ++ +       REI +L+ ++ G NI+ LQ VV     +   L+FE+++  D K+   +  D+      I+ +LY++L+ + YCHS  ++HRD+KP N++ID     L+L D+GLA  F  P + +   V + +++ PE+L+  + Y   +D+WS+GC+ A M+
Sbjct:   39 YQLVRKLGRGKYSEVFEAINITNNEKCVVKILKPVKKKK-----IKREIKILENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLSDYD-----IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHDHRKLRLIDWGLAE-FYHPGQDYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: MRK1_YEAST (Serine/threonine-protein kinase MRK1 OS=Saccharomyces cerevisiae GN=MRK1 PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 6.575e-24
Identity = 67/208 (32.21%), Postives = 113/208 (54.33%), Query Frame = 1
Query:  211 SVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKK-----LYLVFEYLDLDLKKHMDSCPDFAND-PRL-IKTFLYQILRGIAYCHS-HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            ++   Y   E +G G++GVV       TN+ +A+KK+  ++  +       RE+  +K + H N V LQ   + + +     L LV +Y+   L + +    +     PR+ IK + YQ+ + + Y H+  R+ HRD+KPQNLL+D  T + K+ DFG A+    P +     + + +YRAPE++ G+ +YS  VDVWS  C+ AE++
Sbjct:  159 TIDISYPTTEVVGHGSFGVVVTTVIIETNQKVAIKKVLQDRRYKN------RELETMKMLCHPNTVGLQYYFYEKDEEDEVYLNLVLDYMPQSLYQRLRHFVNLKMQMPRVEIKFYAYQLFKALNYLHNVPRICHRDIKPQNLLVDPTTFSFKICDFGSAKCLK-PDQPNVSYICSRYYRAPELMFGATNYSNQVDVWSSACVIAELL 359          
The following BLAST results are available for this feature:
BLAST of FC929471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CSK21_ARATH1.014e-2433.17Casein kinase II subunit alpha-1 OS=Arabidopsis th... [more]
BRSK2_MOUSE1.014e-2434.16BR serine/threonine-protein kinase 2 OS=Mus muscul... [more]
KSG4_ARATH1.325e-2434.17Shaggy-related protein kinase delta OS=Arabidopsis... [more]
MSK2_MEDSA1.730e-2432.70Glycogen synthase kinase-3 homolog MsK-2 OS=Medica... [more]
KSG2_ARATH1.730e-2433.66Shaggy-related protein kinase beta OS=Arabidopsis ... [more]
BRSK2_HUMAN2.260e-2433.66BR serine/threonine-protein kinase 2 OS=Homo sapie... [more]
MKC1_CANAL3.855e-2432.89Mitogen-activated protein kinase MKC1 OS=Candida a... [more]
MDS1_YEAST3.855e-2432.09Serine/threonine-protein kinase MDS1/RIM11 OS=Sacc... [more]
CSK2A_SPOFR3.855e-2432.66Casein kinase II subunit alpha OS=Spodoptera frugi... [more]
MRK1_YEAST6.575e-2432.21Serine/threonine-protein kinase MRK1 OS=Saccharomy... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2CE06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2CE06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929471 ID=FC929471; Name=FC929471; organism=Citrus clementina; type=EST; length=815bp
GGCACGAGGCTAAAACTCACTTCTTTCACCGCCGCCGCTGCCTCCAATCA
CCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATCGTCCTCGCG
TCTGTTACTGTATTATGCATTTGTATTTTTCTCTTTCGTAAGCGGTTAAT
TTTTTCTTCATAACACACTGCCGCCACCTACGCCGTCGATTCGTGCCGTT
CTTGTCGCCGTCCGTCGGTAGCAAGTATGAAAAGGTTGAGAAGATTGGTG
AAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAATGAG
ACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTGTGCC
TAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCATGGGA
ACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTATCTG
GTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTTGCCC
AGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAAATTC
TACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGATTTG
AAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGCTTGC
AGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTTACAC
ATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGGATCT
CGCCATTACTCTACTCCAGTTGATGTGTGGTCGGTGGGATGTATATTTGC
TGAGATGGTGAACCA
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