FC929471

Overview
NameFC929471
Unique NameFC929471
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length815
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15041 contig Ccv1_Contig15041:1..815. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK5_MOUSE (Cell division protein kinase 5 OS=Mus musculus GN=Cdk5 PE=1 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 2.229e-72
Identity = 129/197 (65.48%), Postives = 165/197 (83.76%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 813
            KYEK+EKIGEGTYG V+KA+N  T+E +ALK++RL+ +DEGVPS+A+REI LLKE++H NIVRL DV+HS+KKL LVFE+ D DLKK+ DSC +   DP ++K+FL+Q+L+G+ +CHS  VLHRDLKPQNLLI+ R   LKLADFGLARAFGIPVR ++ EVVTLWYR P++L G++ YST +D+WS GCIFAE+ N
Sbjct:    3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN-RNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAN 197          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK5_HUMAN (Cell division protein kinase 5 OS=Homo sapiens GN=CDK5 PE=1 SV=3)

HSP 1 Score: 272.322 bits (695), Expect = 2.229e-72
Identity = 129/197 (65.48%), Postives = 165/197 (83.76%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 813
            KYEK+EKIGEGTYG V+KA+N  T+E +ALK++RL+ +DEGVPS+A+REI LLKE++H NIVRL DV+HS+KKL LVFE+ D DLKK+ DSC +   DP ++K+FL+Q+L+G+ +CHS  VLHRDLKPQNLLI+ R   LKLADFGLARAFGIPVR ++ EVVTLWYR P++L G++ YST +D+WS GCIFAE+ N
Sbjct:    3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN-RNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAN 197          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK5_BOVIN (Cell division protein kinase 5 OS=Bos taurus GN=CDK5 PE=1 SV=2)

HSP 1 Score: 272.322 bits (695), Expect = 2.229e-72
Identity = 129/197 (65.48%), Postives = 165/197 (83.76%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 813
            KYEK+EKIGEGTYG V+KA+N  T+E +ALK++RL+ +DEGVPS+A+REI LLKE++H NIVRL DV+HS+KKL LVFE+ D DLKK+ DSC +   DP ++K+FL+Q+L+G+ +CHS  VLHRDLKPQNLLI+ R   LKLADFGLARAFGIPVR ++ EVVTLWYR P++L G++ YST +D+WS GCIFAE+ N
Sbjct:    3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN-RNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAN 197          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDC2_AJECA (Cell division control protein 2 OS=Ajellomyces capsulata GN=CDC2 PE=3 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 6.484e-72
Identity = 143/215 (66.51%), Postives = 164/215 (76.28%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCV-TNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSE-KKLYLVFEYLDLDLKKHMDSCP-------------------DFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            Y+K+EKIGEGTYGVVYKAR+    N  +ALKKIRLE EDEGVPSTAIREISLLKEM   NIVRL ++VH++  KLYLVFE+LDLDLKK+M++ P                          ++K F+ Q++ GI YCHSHRVLHRDLKPQNLLIDR  N LKLADFGLARAFG+P+RT+THEVVTLWYRAPEILLG R YST VD+WSVG IFAEM
Sbjct:    4 YQKIEKIGEGTYGVVYKARDLTHPNRIVALKKIRLEAEDEGVPSTAIREISLLKEMHDPNIVRLLNIVHADGHKLYLVFEFLDLDLKKYMEALPVSEGGRGKALPDGSTLDMNRLGLGEAMVKKFMAQLVEGIRYCHSHRVLHRDLKPQNLLIDREGN-LKLADFGLARAFGVPLRTYTHEVVTLWYRAPEILLGGRQYSTGVDMWSVGAIFAEM 217          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK5_RAT (Cell division protein kinase 5 OS=Rattus norvegicus GN=Cdk5 PE=1 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 1.106e-71
Identity = 128/197 (64.97%), Postives = 164/197 (83.25%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 813
            KYEK+EKIGEGTYG V+KA+N  T+E +ALK++RL+ +DEGVPS+A+REI LLKE++H NIVRL DV+HS+KKL LVFE+ D DLKK+ DSC +   DP ++K+ L+Q+L+G+ +CHS  VLHRDLKPQNLLI+ R   LKLADFGLARAFGIPVR ++ EVVTLWYR P++L G++ YST +D+WS GCIFAE+ N
Sbjct:    3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC-NGDLDPEIVKSLLFQLLKGLGFCHSRNVLHRDLKPQNLLIN-RNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAN 197          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDC28_YEAST (Cell division control protein 28 OS=Saccharomyces cerevisiae GN=CDC28 PE=1 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 1.106e-71
Identity = 134/203 (66.01%), Postives = 165/203 (81.28%), Query Frame = 1
Query:  220 SKYEKVEKIGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK-KLYLVFEYLDLDLKKHMDSCP-DFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 813
            + Y+++EK+GEGTYGVVYKA +    +    +ALKKIRLE EDEGVPSTAIREISLLKE++  NIVRL D+VHS+  KLYLVFE+LDLDLK++M+  P D      ++K F+ Q+ +GIAYCHSHR+LHRDLKPQNLLI++  N LKL DFGLARAFG+P+R +THE+VTLWYRAPE+LLG + YST VD WS+GCIFAEM N
Sbjct:    6 ANYKRLEKVGEGTYGVVYKALDLRPGQGQRVVALKKIRLESEDEGVPSTAIREISLLKELKDDNIVRLYDIVHSDAHKLYLVFEFLDLDLKRYMEGIPKDQPLGADIVKKFMMQLCKGIAYCHSHRILHRDLKPQNLLINKDGN-LKLGDFGLARAFGVPLRAYTHEIVTLWYRAPEVLLGGKQYSTGVDTWSIGCIFAEMCN 207          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDC21_PEA (Cell division control protein 2 homolog 1 (Fragment) OS=Pisum sativum GN=CDC2 PE=2 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 7.169e-71
Identity = 133/148 (89.86%), Postives = 139/148 (93.92%), Query Frame = 1
Query:  265 VVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEV 708
            VVYKAR+ VTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH NIVRLQDVVHSEK+LYLVFEYLDLDLKKHMDS P+F  DPR +K FLYQ+L GIAYCHSHRVLHRDLKPQNLLIDRRTN +KLADFGLARAFGIPVRTFTHEV
Sbjct:    1 VVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFVKDPRQVKMFLYQMLCGIAYCHSHRVLHRDLKPQNLLIDRRTNCVKLADFGLARAFGIPVRTFTHEV 148          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDC2_EMENI (Cell division control protein 2 OS=Emericella nidulans GN=nimX PE=2 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 9.363e-71
Identity = 140/214 (65.42%), Postives = 163/214 (76.17%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCV-TNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSE-KKLYLVFEYLDLDLKKHMDSCP------------------DFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            Y+K+EKIGEGTYGVVYKAR     N  +ALKKIRLE EDEGVPSTAIREISLLKEM   NIVRL ++VH++  KLYLVFE+LDLDLKK+M++ P                  +      ++K F+ Q++ GI +CHSHRVLHRDLKPQNLLIDR  N LKLADFGLARAFG+P+RT+THEVVTLWYR+PEILLG R YST VD+WS G IFAEM
Sbjct:    4 YQKIEKIGEGTYGVVYKARELTHPNRIVALKKIRLEAEDEGVPSTAIREISLLKEMNDPNIVRLLNIVHADGHKLYLVFEFLDLDLKKYMEALPVSEGGRGRALPDGSTLSRNLGLGDAMVKKFMAQLIEGIRFCHSHRVLHRDLKPQNLLIDRDGN-LKLADFGLARAFGVPLRTYTHEVVTLWYRSPEILLGGRQYSTGVDMWSCGAIFAEM 216          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CC2H1_TRYCO (Cell division control protein 2 homolog 1 OS=Trypanosoma congolense GN=CRK1 PE=3 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 4.647e-70
Identity = 127/198 (64.14%), Postives = 159/198 (80.30%), Query Frame = 1
Query:  214 VGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            +GS+Y+++EKIGEG+YGVVY+AR+  T+  +ALK+IRLE  +EGVP TAIREIS+LKE++H NIVRL DV HSE +L LVFEY+++DLKK+MD       DP  I+ F+  +L+G+ +CH   VLHRDLKP NLLI R    LKLADFGL RAFGIPV+ +THEVVTLWYR+P++LLGS  Y TPVD+WSVGCIFAEM
Sbjct:    1 MGSRYQRLEKIGEGSYGVVYRARDITTDVIVALKRIRLESVEEGVPCTAIREISILKELRHENIVRLLDVCHSENRLNLVFEYMEMDLKKYMDRASGNL-DPATIQEFMRSLLKGVRFCHERNVLHRDLKPPNLLISRE-KELKLADFGLGRAFGIPVKKYTHEVVTLWYRSPDVLLGSTQYGTPVDIWSVGCIFAEM 196          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDC2C_DROME (Cell division control protein 2 cognate OS=Drosophila melanogaster GN=cdc2c PE=1 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.934e-69
Identity = 125/195 (64.10%), Postives = 161/195 (82.56%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +++ EKIGEGTYG+VYKAR+  T + +ALKKIRLE E EGVPSTAIREISLLK ++H N+V+L DVV S   LY++FEYL++DLKK MD   D    P+LIK++++QIL  + +CH++R+LHRDLKPQNLL+D     +KLADFGLARAF +P+R +THEVVTLWYRAPEILLG++ YST VD+WS+GCIF+EM+
Sbjct:    8 FQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLEGETEGVPSTAIREISLLKNLKHPNVVQLFDVVISGNNLYMIFEYLNMDLKKLMDKKKDVFT-PQLIKSYMHQILDAVGFCHTNRILHRDLKPQNLLVD-TAGKIKLADFGLARAFNVPMRAYTHEVVTLWYRAPEILLGTKFYSTGVDIWSLGCIFSEMI 200          
The following BLAST results are available for this feature:
BLAST of FC929471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK5_MOUSE2.229e-7265.48Cell division protein kinase 5 OS=Mus musculus GN=... [more]
CDK5_HUMAN2.229e-7265.48Cell division protein kinase 5 OS=Homo sapiens GN=... [more]
CDK5_BOVIN2.229e-7265.48Cell division protein kinase 5 OS=Bos taurus GN=CD... [more]
CDC2_AJECA6.484e-7266.51Cell division control protein 2 OS=Ajellomyces cap... [more]
CDK5_RAT1.106e-7164.97Cell division protein kinase 5 OS=Rattus norvegicu... [more]
CDC28_YEAST1.106e-7166.01Cell division control protein 28 OS=Saccharomyces ... [more]
CDC21_PEA7.169e-7189.86Cell division control protein 2 homolog 1 (Fragmen... [more]
CDC2_EMENI9.363e-7165.42Cell division control protein 2 OS=Emericella nidu... [more]
CC2H1_TRYCO4.647e-7064.14Cell division control protein 2 homolog 1 OS=Trypa... [more]
CDC2C_DROME3.934e-6964.10Cell division control protein 2 cognate OS=Drosoph... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2CE06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2CE06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929471 ID=FC929471; Name=FC929471; organism=Citrus clementina; type=EST; length=815bp
GGCACGAGGCTAAAACTCACTTCTTTCACCGCCGCCGCTGCCTCCAATCA
CCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATCGTCCTCGCG
TCTGTTACTGTATTATGCATTTGTATTTTTCTCTTTCGTAAGCGGTTAAT
TTTTTCTTCATAACACACTGCCGCCACCTACGCCGTCGATTCGTGCCGTT
CTTGTCGCCGTCCGTCGGTAGCAAGTATGAAAAGGTTGAGAAGATTGGTG
AAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAATGAG
ACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTGTGCC
TAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCATGGGA
ACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTATCTG
GTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTTGCCC
AGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAAATTC
TACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGATTTG
AAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGCTTGC
AGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTTACAC
ATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGGATCT
CGCCATTACTCTACTCCAGTTGATGTGTGGTCGGTGGGATGTATATTTGC
TGAGATGGTGAACCA
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