FC929471

Overview
NameFC929471
Unique NameFC929471
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length815
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15041 contig Ccv1_Contig15041:1..815. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CRK1_LEIME (Cell division protein kinase 2 homolog CRK1 OS=Leishmania mexicana GN=CRK1 PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.550e-68
Identity = 130/196 (66.33%), Postives = 155/196 (79.08%), Query Frame = 1
Query:  220 SKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            S+YE+ EKIGEGTYGVVYKAR+  T  T+ALK+IRL+ E+EGVP TAIREISLLKE++H NIV+L DV HSE +L +VFEYLDLDLKK++D   +   D   I+ F+  +LRG+A+CH   VLHRDLKPQNLLI R    LKL DFGL R+F IPVR FT+EVVTLWYR P++LLGS  Y  PVDVWSVGCIF+EM
Sbjct:    3 SRYERQEKIGEGTYGVVYKARDTSTAATVALKRIRLDSEEEGVPCTAIREISLLKELRHENIVKLLDVCHSEHRLTIVFEYLDLDLKKYLDR-ENGNLDAATIQHFMRDLLRGVAFCHQRSVLHRDLKPQNLLISRE-KELKLGDFGLGRSFAIPVRKFTNEVVTLWYRPPDVLLGSMQYGPPVDVWSVGCIFSEM 196          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK5_GLOMM (Cell division protein kinase 5 homolog OS=Glossina morsitans morsitans GN=Cdk5 PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.550e-68
Identity = 125/197 (63.45%), Postives = 162/197 (82.23%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 813
            KYEK+EKIGEGTYG V+K RN  T E +ALK++RL+++DEGVPS+A+REI LLKE++H NIVRL DV+HSEKKL LVFE+ D DLKK+ DS  +   D  + ++F+ Q+LRG+A+CHSH VLHRDLKPQNLLI+ +   LKLADFGLARAFGIPV+ ++ EVVTLWYR P++L G++ Y+T +D+WS GCIFAE+ +
Sbjct:    3 KYEKLEKIGEGTYGTVFKGRNRETLEIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSL-NGDIDMAVCRSFMLQLLRGLAFCHSHNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELAD 197          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDC2_CAEBR (Cell division control protein 2 homolog OS=Caenorhabditis briggsae GN=cdk-1 PE=3 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 7.419e-68
Identity = 123/195 (63.08%), Postives = 156/195 (80.00%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDP-RLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            + K+EKIGEGTYGVVYK RN  T   +A+KKIRLE EDEGVPSTA+REISLLKE+QH N+V L+ V+  E +LYL+FE+L  DLK++MD+       P   +K++ +QIL+ + +CH  RV+HRDLKPQNLL+D +  A+KLADFGLARA GIP+R +THEVVTLWYRAPEIL+G++ YS  VD+WS+GCIFAEM
Sbjct:   16 FTKLEKIGEGTYGVVYKGRNRRTQAMVAMKKIRLESEDEGVPSTAVREISLLKELQHPNVVGLEAVIMQENRLYLIFEFLSYDLKRYMDTLSKEEYLPSETLKSYTFQILQAMCFCHQRRVIHRDLKPQNLLVDEK-GAIKLADFGLARAIGIPIRVYTHEVVTLWYRAPEILMGAQRYSMGVDMWSIGCIFAEM 209          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: PHO85_YARLI (Negative regulator of the PHO system OS=Yarrowia lipolytica GN=PHO85 PE=3 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.265e-67
Identity = 127/200 (63.50%), Postives = 161/200 (80.50%), Query Frame = 1
Query:  211 SVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-ANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            +  S+++++EK+GEGTY  VYK RN  T + +ALK+I L+ E EG PSTAIREISL+KE++H NIV L DV+H+E KL LVFEY+D DLKK MD+  +  A + + +K F+YQ+LRGI +CH +RVLHRDLKPQNLLI+ +   LKLADFGLARAFGIPV TF++EVVTLWYRAP++LLGSR YST +D+WS GCI AEM
Sbjct:    2 NTSSQFQQLEKLGEGTYATVYKGRNRTTGQLVALKEINLDSE-EGTPSTAIREISLMKELKHENIVTLYDVIHTENKLNLVFEYMDKDLKKFMDTNGNKGALETKQVKWFMYQLLRGILFCHDNRVLHRDLKPQNLLINAK-GQLKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSAGCIMAEM 199          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CC2H1_TRYBB (Cell division control protein 2 homolog 1 OS=Trypanosoma brucei brucei GN=CRK1 PE=3 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.653e-67
Identity = 125/198 (63.13%), Postives = 157/198 (79.29%), Query Frame = 1
Query:  214 VGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            +GS+YE+++KIGEG+YGVV++AR+  T   +A+K+IRLE+E+EGVP TAIREIS+LKE++H NIVRL DV HSEK+L LVFE +++DLKK+MD       D   I+ F+  +L G+ +CH   VLHRDLKP NLLI R    LKLADFGL RAFGIPV+ FT EVVTLWYR+P++LLGS  Y TPVD+WSVGCIFAEM
Sbjct:    1 MGSRYERLQKIGEGSYGVVFRARDVTTGTIVAVKRIRLEKEEEGVPCTAIREISILKELRHENIVRLLDVCHSEKRLTLVFECMEMDLKKYMDHVGGDL-DAGTIQEFMRSLLSGVRFCHERNVLHRDLKPPNLLISRE-KELKLADFGLGRAFGIPVKKFTQEVVTLWYRSPDVLLGSTQYGTPVDIWSVGCIFAEM 196          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDC2_CAEEL (Cell division control protein 2 homolog OS=Caenorhabditis elegans GN=cdk-1 PE=1 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 2.159e-67
Identity = 122/195 (62.56%), Postives = 155/195 (79.49%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDP-RLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            + K+EKIGEGTYGVVYK +N  TN  +A+KKIRLE EDEGVPSTA+REISLLKE+QH N+V L+ V+  E +L+L+FE+L  DLK++MD        P   +K++ +QIL+ + +CH  RV+HRDLKPQNLL+D    A+KLADFGLARA GIP+R +THEVVTLWYRAPEIL+G++ YS  VD+WS+GCIFAEM
Sbjct:   22 FTKLEKIGEGTYGVVYKGKNRRTNAMVAMKKIRLESEDEGVPSTAVREISLLKELQHPNVVGLEAVIMQENRLFLIFEFLSFDLKRYMDQLGKDEYLPLETLKSYTFQILQAMCFCHQRRVIHRDLKPQNLLVD-NNGAIKLADFGLARAIGIPIRVYTHEVVTLWYRAPEILMGAQRYSMGVDMWSIGCIFAEM 215          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK5_DROME (Cell division protein kinase 5 homolog OS=Drosophila melanogaster GN=Cdk5 PE=1 SV=2)

HSP 1 Score: 253.832 bits (647), Expect = 8.203e-67
Identity = 122/197 (61.93%), Postives = 161/197 (81.73%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 813
            KY+K+EKIGEGTYG V+K RN  T E +ALK++RL+++DEGVPS+A+REI LLKE++H NIVRL DV+HS+KKL LVFE+ D DLKK+ DS  +   D  + ++F+ Q+LRG+A+CHSH VLHRDLKPQNLLI+ +   LKLADFGLARAFGIPV+ ++ EVVTLWYR P++L G++ Y+T +D+WS GCI AE+ +
Sbjct:    3 KYDKMEKIGEGTYGTVFKGRNRDTMEIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVRLIDVLHSDKKLTLVFEHCDQDLKKYFDSL-NGEIDMAVCRSFMLQLLRGLAFCHSHNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCILAELAD 197          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: PHO85_CANAL (Negative regulator of the PHO system OS=Candida albicans GN=PHO85 PE=3 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 3.117e-66
Identity = 123/197 (62.44%), Postives = 158/197 (80.20%), Query Frame = 1
Query:  220 SKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMD-SCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            S+++++EK+GEGTY  VYK RN  T   +ALK+I L+ E EG PSTAIREISL+KE+ H NIV L DV+H+E KL LVFEY+D DLKK+M+      A D +++K+F++Q+L+GI +CH +RVLHRDLKPQNLLI+ +   LKL DFGLARAFGIP  TF++EVVTLWYRAP++LLGSR Y+T +D+WS GCIFAEM
Sbjct:    6 SQFQQLEKLGEGTYATVYKGRNRATGALVALKEISLDSE-EGTPSTAIREISLMKELDHENIVTLYDVIHTENKLTLVFEYMDKDLKKYMEVHGQQSALDLKVVKSFMFQLLKGIMFCHDNRVLHRDLKPQNLLINNK-GELKLGDFGLARAFGIPFNTFSNEVVTLWYRAPDVLLGSRAYTTSIDIWSAGCIFAEM 200          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: PHO85_YEAST (Cyclin-dependent protein kinase PHO85 OS=Saccharomyces cerevisiae GN=PHO85 PE=1 SV=2)

HSP 1 Score: 249.98 bits (637), Expect = 1.184e-65
Identity = 124/205 (60.49%), Postives = 161/205 (78.54%), Query Frame = 1
Query:  211 SVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPR-----LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            S  S+++++EK+G GTY  VYK  N  T   +ALK+++L+ E EG PSTAIREISL+KE++H NIVRL DV+H+E KL LVFE++D DLKK+MDS     N PR     L+K F +Q+L+G+A+CH +++LHRDLKPQNLLI++R   LKL DFGLARAFGIPV TF+ EVVTLWYRAP++L+GSR YST +D+WS GCI AEM+
Sbjct:    2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDS-RTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKR-GQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMI 203          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: PHO85_DEBHA (Negative regulator of the PHO system OS=Debaryomyces hansenii GN=PHO85 PE=3 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 2.639e-65
Identity = 120/197 (60.91%), Postives = 159/197 (80.71%), Query Frame = 1
Query:  220 SKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-ANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            S+++++EK+GEGTY  VYK RN    + +ALK+I L+ E EG PSTAIREISL+KE+ H NIV L DV+H+E KL LVFE++D DLKK+M++  +  A D +++K+F++Q+L+GI +CH +RVLHRDLKPQNLLI+ +   LKL DFGLARAFGIP  TF++EVVTLWYRAP++LLGSR Y+  +D+WS GCIFAEM
Sbjct:    6 SQFQQLEKLGEGTYATVYKGRNRTNGQLVALKEINLDSE-EGTPSTAIREISLMKELDHENIVTLYDVIHTENKLTLVFEFMDKDLKKYMEAHGNQGALDLKIVKSFIFQLLKGIMFCHDNRVLHRDLKPQNLLINNK-GELKLGDFGLARAFGIPFNTFSNEVVTLWYRAPDVLLGSRAYTASIDIWSAGCIFAEM 200          
The following BLAST results are available for this feature:
BLAST of FC929471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK1_LEIME2.550e-6866.33Cell division protein kinase 2 homolog CRK1 OS=Lei... [more]
CDK5_GLOMM2.550e-6863.45Cell division protein kinase 5 homolog OS=Glossina... [more]
CDC2_CAEBR7.419e-6863.08Cell division control protein 2 homolog OS=Caenorh... [more]
PHO85_YARLI1.265e-6763.50Negative regulator of the PHO system OS=Yarrowia l... [more]
CC2H1_TRYBB1.653e-6763.13Cell division control protein 2 homolog 1 OS=Trypa... [more]
CDC2_CAEEL2.159e-6762.56Cell division control protein 2 homolog OS=Caenorh... [more]
CDK5_DROME8.203e-6761.93Cell division protein kinase 5 homolog OS=Drosophi... [more]
PHO85_CANAL3.117e-6662.44Negative regulator of the PHO system OS=Candida al... [more]
PHO85_YEAST1.184e-6560.49Cyclin-dependent protein kinase PHO85 OS=Saccharom... [more]
PHO85_DEBHA2.639e-6560.91Negative regulator of the PHO system OS=Debaryomyc... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2CE06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2CE06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929471 ID=FC929471; Name=FC929471; organism=Citrus clementina; type=EST; length=815bp
GGCACGAGGCTAAAACTCACTTCTTTCACCGCCGCCGCTGCCTCCAATCA
CCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATCGTCCTCGCG
TCTGTTACTGTATTATGCATTTGTATTTTTCTCTTTCGTAAGCGGTTAAT
TTTTTCTTCATAACACACTGCCGCCACCTACGCCGTCGATTCGTGCCGTT
CTTGTCGCCGTCCGTCGGTAGCAAGTATGAAAAGGTTGAGAAGATTGGTG
AAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAATGAG
ACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTGTGCC
TAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCATGGGA
ACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTATCTG
GTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTTGCCC
AGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAAATTC
TACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGATTTG
AAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGCTTGC
AGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTTACAC
ATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGGATCT
CGCCATTACTCTACTCCAGTTGATGTGTGGTCGGTGGGATGTATATTTGC
TGAGATGGTGAACCA
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