FC929471

Overview
NameFC929471
Unique NameFC929471
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length815
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15041 contig Ccv1_Contig15041:1..815. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: PHO85_CANGA (Negative regulator of the PHO system OS=Candida glabrata GN=PHO85 PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.639e-65
Identity = 124/202 (61.39%), Postives = 158/202 (78.22%), Query Frame = 1
Query:  220 SKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPR-----LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            S+++++EK+G GTY  VYK  N  T   +ALK+++L+ E EG PSTAIREISL+KE++H NIVRL DV+H+E KL LVFEY+D DLKK+MDS     N PR     L+K F +Q+L G+A+CH +++LHRDLKPQNLLI +R   LKL DFGLARAFGIPV TF+ EVVTLWYRAP++L+GSR YST +D+WS GCI AEM+
Sbjct:    4 SQFKQLEKLGNGTYATVYKGLNKSTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHDNIVRLYDVIHTENKLTLVFEYMDNDLKKYMDS-RTVGNAPRGLEMNLVKYFQWQLLEGLAFCHENKILHRDLKPQNLLITKR-GQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMI 202          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK17_MOUSE (Cell division protein kinase 17 OS=Mus musculus GN=Cdk17 PE=1 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 2.639e-65
Identity = 122/196 (62.24%), Postives = 153/196 (78.06%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 813
            Y K+EK+GEGTY  VYK R+ +T   +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D+VH++K L LVFEYLD DLK++MD C +  +    +K FLYQILRG+AYCH  +VLHRDLKPQNLLI+ R   LKLADFGLARA  +P +T+++EVVTLWYR P++LLGS  YST +D+W VGCIF EM +
Sbjct:  192 YIKLEKLGEGTYATVYKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMSMHN-VKLFLYQILRGLAYCHRRKVLHRDLKPQNLLINER-GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMAS 384          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK17_RAT (Cell division protein kinase 17 OS=Rattus norvegicus GN=Cdk17 PE=1 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.446e-65
Identity = 122/196 (62.24%), Postives = 152/196 (77.55%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 813
            Y K+EK+GEGTY  VYK R+ +T   +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D+VH++K L LVFEYLD DLK++MD C    +    +K FLYQILRG+AYCH  +VLHRDLKPQNLLI+ R   LKLADFGLARA  +P +T+++EVVTLWYR P++LLGS  YST +D+W VGCIF EM +
Sbjct:  192 YIKLEKLGEGTYATVYKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGSIMSMHN-VKLFLYQILRGLAYCHRRKVLHRDLKPQNLLINER-GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMAS 384          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: PEF1_SCHPO (Serine/threonine-protein kinase pef1 OS=Schizosaccharomyces pombe GN=pef1 PE=2 SV=2)

HSP 1 Score: 247.669 bits (631), Expect = 5.878e-65
Identity = 124/195 (63.59%), Postives = 157/195 (80.51%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-ANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            Y+++EK+GEGTY  VYK +N VT E +ALK IR++  DEG PSTAIREISL+KE++H NI+ L DV+ +E KL LVFEY++ DLKK+MD+  +  A  P  +K F  Q+L+GI++CH +RVLHRDLKPQNLLI+ R   LKLADFGLAR+ GIPV TF++EVVTLWYRAP++LLGSR YST +D+WSVGCI AEM
Sbjct:    3 YQRLEKLGEGTYAHVYKGQNRVTGEIVALKVIRIDA-DEGTPSTAIREISLMKELRHPNIMSLSDVLQTENKLMLVFEYMEKDLKKYMDTYGNQGALPPSQVKNFTQQLLKGISFCHENRVLHRDLKPQNLLINSR-GELKLADFGLARSIGIPVNTFSNEVVTLWYRAPDVLLGSRVYSTSIDIWSVGCIMAEM 195          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK17_HUMAN (Cell division protein kinase 17 OS=Homo sapiens GN=CDK17 PE=1 SV=2)

HSP 1 Score: 247.669 bits (631), Expect = 5.878e-65
Identity = 121/196 (61.73%), Postives = 153/196 (78.06%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 813
            Y K+EK+GEGTY  VYK R+ +T   +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D+VH++K L LVFEYLD DLK++MD C +  +    +K FLYQILRG+AYCH  +VLHRDLKPQNLLI+ +   LKLADFGLARA  +P +T+++EVVTLWYR P++LLGS  YST +D+W VGCIF EM +
Sbjct:  192 YIKLEKLGEGTYATVYKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMSMHN-VKLFLYQILRGLAYCHRRKVLHRDLKPQNLLINEK-GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMAS 384          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK16_HUMAN (Cell division protein kinase 16 OS=Homo sapiens GN=CDK16 PE=1 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 1.003e-64
Identity = 124/212 (58.49%), Postives = 159/212 (75.00%), Query Frame = 1
Query:  172 RHLRRRFVPFLSPSVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            R LRR  +  +       Y K++K+GEGTY  VYK ++ +T+  +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D++H+EK L LVFEYLD DLK+++D C +  N    +K FL+Q+LRG+AYCH  +VLHRDLKPQNLLI+ R   LKLADFGLARA  IP +T+++EVVTLWYR P+ILLGS  YST +D+W VGCIF EM
Sbjct:  147 RRLRRVSLSEIGFGKLETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHN-VKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINER-GELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEM 355          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK16_MOUSE (Cell division protein kinase 16 OS=Mus musculus GN=Cdk16 PE=1 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.310e-64
Identity = 124/212 (58.49%), Postives = 159/212 (75.00%), Query Frame = 1
Query:  172 RHLRRRFVPFLSPSVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            R LRR  +  +       Y K++K+GEGTY  VYK ++ +T+  +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D++H+EK L LVFEYLD DLK+++D C +  N    +K FL+Q+LRG+AYCH  +VLHRDLKPQNLLI+ R   LKLADFGLARA  IP +T+++EVVTLWYR P+ILLGS  YST +D+W VGCIF EM
Sbjct:  147 RRLRRVSLSEIGFGKLETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNVINMHN-VKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINER-GELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEM 355          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CKB11_ORYSJ (Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp. japonica GN=CDKB1-1 PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.234e-64
Identity = 122/206 (59.22%), Postives = 157/206 (76.21%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHSEKK----LYLVFEYLDLDLKKHMDSCPDFANDPR-----LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            KYEK+EK+GEGTYG VYKA++  T + +ALKK RLE ++EG+P TA+REIS+L+ +     +VRL  V  + K     LYLVFE+LD DLKK +D+     N PR     +IK+FLYQ+ +G+A+CH H VLHRDLKPQNLL+D+    LK+AD GL RAF +P++++THE+VTLWYRAPE+LLGS HYST VD+WSVGCIFAEMV
Sbjct:    3 KYEKLEKVGEGTYGKVYKAQDRATGQLVALKKTRLEMDEEGIPPTALREISILRLLSQSLYVVRLLSVEQATKNGKPVLYLVFEFLDTDLKKFVDAYRKGPN-PRPLPTNVIKSFLYQLCKGVAHCHGHGVLHRDLKPQNLLVDKEKGILKIADLGLGRAFTVPMKSYTHEIVTLWYRAPEVLLGSTHYSTGVDIWSVGCIFAEMV 207          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CKB12_ARATH (Cyclin-dependent kinase B1-2 OS=Arabidopsis thaliana GN=CDKB1-2 PE=1 SV=2)

HSP 1 Score: 243.047 bits (619), Expect = 1.448e-63
Identity = 123/213 (57.75%), Postives = 156/213 (73.24%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRL-----------QDVVHSEKK-LYLVFEYLDLDLKKHMDSCPDFAN----DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            KYEK+EK+GEGTYG VYKA    T + +ALKK RLE ++EG+P TA+REISLL+ +     IVRL             V HS K  LYLVFEYLD DLKK +DS    +N    +  L++ F++Q+ +G+A+CHSH VLHRDLKPQNLL+D+    LK+AD GL+RAF +P++ +THE+VTLWYRAPE+LLGS HYST VD+WSVGCIFAEM+
Sbjct:    3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSQSIYIVRLLCVEHVIQSKDSTVSHSPKSNLYLVFEYLDTDLKKFIDSHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMI 215          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: PHO85_KLULA (Negative regulator of the PHO system OS=Kluyveromyces lactis GN=PHO85 PE=3 SV=2)

HSP 1 Score: 242.662 bits (618), Expect = 1.891e-63
Identity = 120/202 (59.41%), Postives = 158/202 (78.22%), Query Frame = 1
Query:  220 SKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPR-----LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            S+++++EK+G GTY  VYK  N  T   +ALK+++L+ E EG PSTAIREISL+KE++H NIVRL DV+H+E KL LVFE++D DLKK MD+  +  N  +     L+K F +Q+L+G+A+CH +R+LHRDLKPQNLLI+ R   LKL DFGLARAFGIPV TF+ EVVTLWYRAP++L+GSR+Y T +D+WS GCI AEM+
Sbjct:    5 SQFKQLEKVGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHDNIVRLFDVIHTENKLTLVFEFMDNDLKKFMDN-RNKGNSHKGLEMDLVKYFQWQLLQGVAFCHENRILHRDLKPQNLLINNR-GQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRNYCTSIDIWSCGCILAEMI 203          
The following BLAST results are available for this feature:
BLAST of FC929471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PHO85_CANGA2.639e-6561.39Negative regulator of the PHO system OS=Candida gl... [more]
CDK17_MOUSE2.639e-6562.24Cell division protein kinase 17 OS=Mus musculus GN... [more]
CDK17_RAT3.446e-6562.24Cell division protein kinase 17 OS=Rattus norvegic... [more]
PEF1_SCHPO5.878e-6563.59Serine/threonine-protein kinase pef1 OS=Schizosacc... [more]
CDK17_HUMAN5.878e-6561.73Cell division protein kinase 17 OS=Homo sapiens GN... [more]
CDK16_HUMAN1.003e-6458.49Cell division protein kinase 16 OS=Homo sapiens GN... [more]
CDK16_MOUSE1.310e-6458.49Cell division protein kinase 16 OS=Mus musculus GN... [more]
CKB11_ORYSJ2.234e-6459.22Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp... [more]
CKB12_ARATH1.448e-6357.75Cyclin-dependent kinase B1-2 OS=Arabidopsis thalia... [more]
PHO85_KLULA1.891e-6359.41Negative regulator of the PHO system OS=Kluyveromy... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2CE06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2CE06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929471 ID=FC929471; Name=FC929471; organism=Citrus clementina; type=EST; length=815bp
GGCACGAGGCTAAAACTCACTTCTTTCACCGCCGCCGCTGCCTCCAATCA
CCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATCGTCCTCGCG
TCTGTTACTGTATTATGCATTTGTATTTTTCTCTTTCGTAAGCGGTTAAT
TTTTTCTTCATAACACACTGCCGCCACCTACGCCGTCGATTCGTGCCGTT
CTTGTCGCCGTCCGTCGGTAGCAAGTATGAAAAGGTTGAGAAGATTGGTG
AAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAATGAG
ACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTGTGCC
TAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCATGGGA
ACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTATCTG
GTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTTGCCC
AGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAAATTC
TACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGATTTG
AAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGCTTGC
AGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTTACAC
ATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGGATCT
CGCCATTACTCTACTCCAGTTGATGTGTGGTCGGTGGGATGTATATTTGC
TGAGATGGTGAACCA
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