FC929471

Overview
NameFC929471
Unique NameFC929471
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length815
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK16_RAT (Cell division protein kinase 16 OS=Rattus norvegicus GN=Cdk16 PE=1 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 3.226e-63
Identity = 123/214 (57.48%), Postives = 157/214 (73.36%), Query Frame = 1
Query:  178 LRRRFVPFLSPSVG----SKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            L RR  P     +G      Y K++K+GEGTY  VYK ++ +T+  +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D++H+EK L LVFEYLD DLK+++D C +  N    +K FL+Q+LRG+AYCH  +VLHRDLKPQNLLI+ R   LKLADFGLA A  IP +T+++EVVTLWYR P+ILLGS  YS  +D+W VGCIF EM
Sbjct:  145 LSRRLRPVSLSEIGFGKLETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNVINMHN-VKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINER-GELKLADFGLAYAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSGQIDMWGVGCIFYEM 355          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CKD18_RAT (Cell division protein kinase 18 OS=Rattus norvegicus GN=Cdk18 PE=1 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 4.213e-63
Identity = 114/194 (58.76%), Postives = 152/194 (78.35%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            Y K++K+GEGTY  V+K R+ +T   +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D++H+++ L LVFEYLD DLK+++D C +  N    +K F++Q+LRG+AYCH  ++LHRDLKPQNLLI+ R   LKLADFGLARA  +P +T+++EVVTLWYR P++LLGS  YSTP+D+W VGCI  EM
Sbjct:  121 YVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDLIHTDRSLTLVFEYLDSDLKQYLDHCGNLMNMHN-VKIFMFQLLRGLAYCHRRKILHRDLKPQNLLINER-GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEM 311          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK18_MOUSE (Cell division protein kinase 18 OS=Mus musculus GN=Cdk18 PE=1 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 4.213e-63
Identity = 114/194 (58.76%), Postives = 152/194 (78.35%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            Y K++K+GEGTY  V+K R+ +T   +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D++H+++ L LVFEYLD DLK+++D C +  N    +K F++Q+LRG+AYCH  ++LHRDLKPQNLLI+ R   LKLADFGLARA  +P +T+++EVVTLWYR P++LLGS  YSTP+D+W VGCI  EM
Sbjct:  121 YVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDLIHTDRSLTLVFEYLDSDLKQYLDHCGNLMNMHN-VKIFMFQLLRGLAYCHHRKILHRDLKPQNLLINER-GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEM 311          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: PHO85_ASHGO (Negative regulator of the PHO system OS=Ashbya gossypii GN=PHO85 PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 5.502e-63
Identity = 120/201 (59.70%), Postives = 156/201 (77.61%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPR-----LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +++++E++G GTY  VYK  N  T   +ALK+++L+ E EG PSTAIREISL+KE++H NIVRL DV+H+E KL LVFE++D DLKK MDS  D    PR     L+K F +Q+L+G+A+CH +R+LHRDLKPQNLLI+ +   LKL DFGLARAFGIPV TF+ EVVTLWYRAP++L+GSR Y T +D+WS GCI AEM+
Sbjct:    8 RFKQLERLGNGTYATVYKGLNKTTGLYVALKEVKLDSE-EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKFMDSRLD-REMPRGLELSLVKYFQWQLLQGVAFCHENRILHRDLKPQNLLINNK-GQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYCTSIDIWSCGCILAEMI 205          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK18_PONAB (Cell division protein kinase 18 OS=Pongo abelii GN=CDK18 PE=2 SV=2)

HSP 1 Score: 238.424 bits (607), Expect = 3.566e-62
Identity = 113/194 (58.25%), Postives = 151/194 (77.84%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            Y K++K+GEGTY  V+K R+ +T   +ALK+IRLE E EG P TAIRE+SLLK ++H NIV L D++H+++ L LVFEYLD DLK+++D C +  +    +K F++Q+LRG+AYCH  ++LHRDLKPQNLLI+ R   LKLADFGLARA  +P +T+++EVVTLWYR P++LLGS  YSTP+D+W VGCI  EM
Sbjct:  142 YVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKNLKHANIVTLHDLIHTDRSLTLVFEYLDSDLKQYLDHCGNLMSMHN-VKIFMFQLLRGLAYCHHRKILHRDLKPQNLLINER-GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCIHYEM 332          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK18_HUMAN (Cell division protein kinase 18 OS=Homo sapiens GN=CDK18 PE=1 SV=3)

HSP 1 Score: 238.424 bits (607), Expect = 3.566e-62
Identity = 113/194 (58.25%), Postives = 151/194 (77.84%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            Y K++K+GEGTY  V+K R+ +T   +ALK+IRLE E EG P TAIRE+SLLK ++H NIV L D++H+++ L LVFEYLD DLK+++D C +  +    +K F++Q+LRG+AYCH  ++LHRDLKPQNLLI+ R   LKLADFGLARA  +P +T+++EVVTLWYR P++LLGS  YSTP+D+W VGCI  EM
Sbjct:  142 YVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKNLKHANIVTLHDLIHTDRSLTLVFEYLDSDLKQYLDHCGNLMSMHN-VKIFMFQLLRGLAYCHHRKILHRDLKPQNLLINER-GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCIHYEM 332          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CC2H3_TRYBB (Cell division control protein 2 homolog 3 OS=Trypanosoma brucei brucei GN=CRK3 PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 3.566e-62
Identity = 109/195 (55.90%), Postives = 154/195 (78.97%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            +Y +++ +GEGTYGVVY+A +  T + +ALKK+RL++ DEG+P TA+RE+S+L+E+ H NIV L DV+ ++ KLYL+FEY+D DLKK ++     A     +K  +YQ+L G+++CH HR++HRDLKP N+L+    N++K+ADFGLARAF IP+ T+THEVVTLWYRAPEILLG +HY+  VD+WS+GCIFAE+
Sbjct:   22 RYNRMDILGEGTYGVVYRAVDRATGQIVALKKVRLDRTDEGIPQTALREVSILQEIHHPNIVNLLDVICADGKLYLIFEYVDHDLKKALEK-RGGAFTGTTLKKIIYQLLEGLSFCHRHRIVHRDLKPANILV-TTDNSVKIADFGLARAFQIPMHTYTHEVVTLWYRAPEILLGEKHYTPAVDMWSIGCIFAEL 214          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CKB11_ARATH (Cyclin-dependent kinase B1-1 OS=Arabidopsis thaliana GN=CDKB1-1 PE=1 SV=2)

HSP 1 Score: 237.269 bits (604), Expect = 7.945e-62
Identity = 121/211 (57.35%), Postives = 154/211 (72.99%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVH----------SEKKLYLVFEYLDLDLKKHMDSCPDFAN----DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            KYEK+EK+GEGTYG VYKA    T + +ALKK RLE ++EG+P TA+REISLL+ +     +VRL  V H          ++  LYLVFEYLD DLKK +DS     N    +P LI+  ++Q+ +G+A+CHSH VLHRDLKPQNLL+ +    LK+AD GL RAF +P++++THE+VTLWYRAPE+LLGS HYST VD+WSVGCIFAEMV
Sbjct:    3 KYEKLEKVGEGTYGKVYKAMEKGTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSTSIYVVRLLCVEHVHQPSTKSQSTKSNLYLVFEYLDTDLKKFIDSYRKGPNPKPLEPFLIQKLMFQLCKGVAHCHSHGVLHRDLKPQNLLLVKDKELLKIADLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTGVDMWSVGCIFAEMV 213          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CKB21_ORYSJ (Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp. japonica GN=CDKB2-1 PE=1 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.355e-61
Identity = 114/202 (56.44%), Postives = 152/202 (75.25%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-QHGNIVRLQDVVHSEKK-----LYLVFEYLDLDLKKHMDSCPDFANDPRL--IKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            YEK+EK+GEGTYG VYKAR   T   +ALKK RL ++DEGVP TA+RE+SLL+ + Q  ++VRL D+   + K     LYLVFEY+D DLKK + +         +  +K  +YQ+ +G+A+CH   VLHRDLKP NLL+DR+T ALK+AD GL+R+F +P++ +THE++TLWYRAPE+LLG+ HYSTPVD+WSVGCIFAE+
Sbjct:   28 YEKLEKVGEGTYGKVYKAREKATGRIVALKKTRLPEDDEGVPPTALREVSLLRMLSQDSHVVRLLDLKQGQNKEGQTILYLVFEYMDTDLKKFIRAHRQNLQKIPVPTVKILMYQLCKGVAFCHGRGVLHRDLKPHNLLMDRKTMALKIADLGLSRSFTVPLKKYTHEILTLWYRAPEVLLGAAHYSTPVDIWSVGCIFAEL 229          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDC28_ENCCU (Probable cell division control protein 28 homolog OS=Encephalitozoon cuniculi GN=CDC28 PE=3 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.355e-61
Identity = 112/197 (56.85%), Postives = 147/197 (74.62%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFAN--DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            ++K+EKIGEGTYGVVYKAR   TN  +ALKKIRLE E+EG+P+T IREI LLK ++H  IV L DV+++  K+YLVFEY++LDL++++D   D     +   ++    Q+L  + YCHS  + HRDLKPQN+L+D + N +KLADFGL RA GIP+RT+T EVVTLWYR PE+LLG ++Y   VDVWS  CI AE+V
Sbjct:    5 FQKLEKIGEGTYGVVYKARERNTNRVVALKKIRLENENEGIPATTIREILLLKNLKHSTIVELSDVIYNNNKMYLVFEYVELDLRRYLDRMSDEGRLVEEGFVRKMSQQLLTAMEYCHSRNIFHRDLKPQNILVDPKEN-IKLADFGLGRAAGIPLRTYTTEVVTLWYRPPELLLGCKYYDASVDVWSAACIMAEVV 200          
The following BLAST results are available for this feature:
BLAST of FC929471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK16_RAT3.226e-6357.48Cell division protein kinase 16 OS=Rattus norvegic... [more]
CKD18_RAT4.213e-6358.76Cell division protein kinase 18 OS=Rattus norvegic... [more]
CDK18_MOUSE4.213e-6358.76Cell division protein kinase 18 OS=Mus musculus GN... [more]
PHO85_ASHGO5.502e-6359.70Negative regulator of the PHO system OS=Ashbya gos... [more]
CDK18_PONAB3.566e-6258.25Cell division protein kinase 18 OS=Pongo abelii GN... [more]
CDK18_HUMAN3.566e-6258.25Cell division protein kinase 18 OS=Homo sapiens GN... [more]
CC2H3_TRYBB3.566e-6255.90Cell division control protein 2 homolog 3 OS=Trypa... [more]
CKB11_ARATH7.945e-6257.35Cyclin-dependent kinase B1-1 OS=Arabidopsis thalia... [more]
CKB21_ORYSJ1.355e-6156.44Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp... [more]
CDC28_ENCCU1.355e-6156.85Probable cell division control protein 28 homolog ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2CE06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2CE06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929471 ID=FC929471; Name=FC929471; organism=Citrus clementina; type=EST; length=815bp
GGCACGAGGCTAAAACTCACTTCTTTCACCGCCGCCGCTGCCTCCAATCA
CCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATCGTCCTCGCG
TCTGTTACTGTATTATGCATTTGTATTTTTCTCTTTCGTAAGCGGTTAAT
TTTTTCTTCATAACACACTGCCGCCACCTACGCCGTCGATTCGTGCCGTT
CTTGTCGCCGTCCGTCGGTAGCAAGTATGAAAAGGTTGAGAAGATTGGTG
AAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAATGAG
ACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTGTGCC
TAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCATGGGA
ACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTATCTG
GTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTTGCCC
AGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAAATTC
TACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGATTTG
AAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGCTTGC
AGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTTACAC
ATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGGATCT
CGCCATTACTCTACTCCAGTTGATGTGTGGTCGGTGGGATGTATATTTGC
TGAGATGGTGAACCA
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