FC929471

Overview
NameFC929471
Unique NameFC929471
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length815
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15041 contig Ccv1_Contig15041:1..815. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDC2C_ANTMA (Cell division control protein 2 homolog C OS=Antirrhinum majus GN=CDC2C PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 6.726e-61
Identity = 120/207 (57.97%), Postives = 154/207 (74.40%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVH------SEKKLYLVFEYLDLDLKKHMDSCPDFAND----PRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            KYEK+EK+GEGTYG VYKA    T + +ALKK RLE ++EGVP TA+RE+SLL+ +     +VRL  V H       +  LYLVFEYLD DLKK +DS     N     P+ I++FL+Q+ +G+++CH+H VLHRDLKPQNLL+D+    LK+AD GLARAF +P++++THE+VTL YRAPE+LLGS HYST VD+ SVGCIFAEMV
Sbjct:    3 KYEKLEKVGEGTYGKVYKALEKSTGQVVALKKTRLEMDEEGVPPTALREVSLLQMLSQSLYVVRLLSVEHVDCAKNGKPLLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPQQIQSFLFQLCKGVSHCHAHGVLHRDLKPQNLLLDKDKGVLKIADLGLARAFTVPLKSYTHEIVTLSYRAPEVLLGSSHYSTAVDMSSVGCIFAEMV 209          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CKB21_ARATH (Cyclin-dependent kinase B2-1 OS=Arabidopsis thaliana GN=CDKB2-1 PE=1 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 2.556e-60
Identity = 113/211 (53.55%), Postives = 155/211 (73.46%), Query Frame = 1
Query:  202 LSPSVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHSEKK-----LYLVFEYLDLDLKKHMDSCPDFAND--PRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            ++ S    +EK+EK+GEGTYG VY+AR   T + +ALKK RL +++EGVPST +REIS+L+ +    ++VRL DV     K     LYLVFEY+D D+KK + S      +   + IK+ +YQ+ +G+A+CH H +LHRDLKP NLL+D +T  LK+AD GLARAF +P++ +THE++TLWYRAPE+LLG+ HYST VD+WSVGCIFAE+V
Sbjct:    6 IAVSAMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPSTTLREISILRMLARDPHVVRLMDVKQGLSKEGKTVLYLVFEYMDTDVKKFIRSFRSTGKNIPTQTIKSLMYQLCKGMAFCHGHGILHRDLKPHNLLMDPKTMRLKIADLGLARAFTLPMKKYTHEILTLWYRAPEVLLGATHYSTAVDMWSVGCIFAELV 216          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CKB22_ARATH (Cyclin-dependent kinase B2-2 OS=Arabidopsis thaliana GN=CDKB2-2 PE=1 SV=2)

HSP 1 Score: 231.876 bits (590), Expect = 3.338e-60
Identity = 115/203 (56.65%), Postives = 152/203 (74.88%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDV---VHSEKK--LYLVFEYLDLDLKKHMDSCPDFAND--PRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +EK+EK+GEGTYG VY+AR   T   +ALKK RL +++EGVP T +REIS+L+ +    +IVRL DV   ++ E K  LYLVFEY+D DLKK + S      +     +K  +YQ+ +G+A+CH H VLHRDLKP NLL+DR+T  LK+AD GLARAF +P++ +THE++TLWYRAPE+LLG+ HYST VD+WSVGCIFAE+V
Sbjct:   16 FEKLEKVGEGTYGKVYRAREKATGMIVALKKTRLHEDEEGVPPTTLREISILRMLARDPHIVRLMDVKQGINKEGKTVLYLVFEYVDTDLKKFIRSFRQAGQNIPQNTVKCLMYQLCKGMAFCHGHGVLHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPMKKYTHEILTLWYRAPEVLLGATHYSTGVDMWSVGCIFAELV 218          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDC2D_ANTMA (Cell division control protein 2 homolog D OS=Antirrhinum majus GN=CDC2D PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.691e-59
Identity = 109/203 (53.69%), Postives = 149/203 (73.40%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHSEKK-----LYLVFEYLDLDLKKHMDSCPDFAND--PRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            + K+EK+GEGTYG VY+A    T + +ALKK RL +++EGVP T +RE+SLL+ +    ++VRL DV   + K     LYLVFEY+D DLKK++ S         P  +K+ +YQ+ +G+A+CH H VLHRDLKP NLL+DR+T  LK+AD GLARA+ +P++ +THE++TLWYRAPE+LLG+ HYS  VD+WSV CIFAE+V
Sbjct:   14 FVKLEKVGEGTYGKVYRAMEKSTGKIVALKKTRLHEDEEGVPPTTLREVSLLRMLSRDPHVVRLLDVKQGQNKEGKTVLYLVFEYMDTDLKKYIRSFKQTGESIAPMNVKSLMYQLCKGVAFCHGHGVLHRDLKPHNLLMDRKTMMLKIADLGLARAYTLPIKKYTHEILTLWYRAPEVLLGATHYSPAVDMWSVACIFAELV 216          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK14_HUMAN (Cell division protein kinase 14 OS=Homo sapiens GN=CDK14 PE=1 SV=3)

HSP 1 Score: 224.557 bits (571), Expect = 5.329e-58
Identity = 115/204 (56.37%), Postives = 149/204 (73.04%), Query Frame = 1
Query:  205 SPSVGS--KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            SP  G    YEK+EK+GEG+Y  VYK ++ V  + +ALK IRL QE+EG P TAIRE SLLK ++H NIV L D++H+++ L LVFEY+  DL ++MD  P   + P  +K FL+Q+LRG++Y H   +LHRDLKPQNLLI   T  LKLADFGLARA  +P  T+++EVVTLWYR P++LLGS  YST +D+W VGCIF EM+
Sbjct:  126 SPKFGKADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRL-QEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLH-PDNVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISD-TGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMI 326          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK14_MOUSE (Cell division protein kinase 14 OS=Mus musculus GN=Cdk14 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.551e-57
Identity = 114/204 (55.88%), Postives = 149/204 (73.04%), Query Frame = 1
Query:  205 SPSVGS--KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            SP  G    YEK+EK+GEG+Y  VYK ++ V  + +ALK IRL QE+EG P TAIRE SLLK ++H NIV L D++H+++ L LVFEY+  DL ++M+  P   + P  +K FL+Q+LRG++Y H   +LHRDLKPQNLLI   T  LKLADFGLARA  +P  T+++EVVTLWYR P++LLGS  YST +D+W VGCIF EM+
Sbjct:  126 SPKFGKADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRL-QEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVHTDLCQYMEQHPGGLH-PDNVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISD-TGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMI 326          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CC2H2_TRYBB (Cell division control protein 2 homolog 2 OS=Trypanosoma brucei brucei GN=CRK2 PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.239e-56
Identity = 104/207 (50.24%), Postives = 147/207 (71.01%), Query Frame = 1
Query:  187 RFVPFLSPSVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            R  P    S   +Y ++EK+GEG+YG+VYK  +  T  T+A+K+I L   D GVPSTA+RE+SLL+E+ H  +VRL DVV  E KL L+FEY++ DL+  +    + A     ++  ++Q+L G+  CHS R +HRD+KP N+LIDR+ + +KLADFGL RAF +P++T+T EV+TLWYRAPE+LLG + Y   VDVWS+GC+FAE+
Sbjct:   33 RPAPLRGTSTPDRYSRIEKVGEGSYGIVYKCHDNFTGRTVAMKRIPLIVNDGGVPSTAVREVSLLRELNHPYVVRLLDVVLHEAKLLLIFEYMEQDLQGMLKQ-RNTAFVGGKLRRIMFQLLLGLHECHSRRFVHRDIKPSNILIDRKESVVKLADFGLGRAFRVPLQTYTTEVMTLWYRAPEVLLGDKQYLPAVDVWSMGCVFAEL 238          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK15_HUMAN (Cell division protein kinase 15 OS=Homo sapiens GN=CDK15 PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.961e-52
Identity = 106/208 (50.96%), Postives = 141/208 (67.79%), Query Frame = 1
Query:  184 RRFVPFLSPSVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            R+ +PF      S Y  +EK+GEG+Y  VYK  + +  + +ALK I +  E EGVP TAIRE SLLK ++H NIV L D++H+++ L  VFEY+  DL ++M   P   + P  ++ F++Q+LRG+AY H   VLHRDLKPQNLLI      LKLADFGLARA  IP +T++ EVVTLWYR P+ LLG+  YS+ +D+W  GCIF EM
Sbjct:   41 RKSLPF---GAASSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMNAE-EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMHTDLAQYMSQHPGGLH-PHNVRLFMFQLLRGLAYIHHQHVLHRDLKPQNLLISH-LGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDALLGATEYSSELDIWGAGCIFIEM 242          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK2_ENTHI (Cell division protein kinase 2 homolog OS=Entamoeba histolytica GN=CDC2 PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.562e-52
Identity = 102/199 (51.26%), Postives = 143/199 (71.86%), Query Frame = 1
Query:  220 SKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-ANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 813
            ++YEK +++GEGTYGVV KA + V N  +ALKKI+ E+ED+G+P T++REI++L E++H N+V L D+   +K LYLVFE+ D DL + M        N+ R I   +YQIL+G+A+CH H++LHRD+KPQN+LI+ +   +KL +FGLAR   I  R +T EVVTLWYRAPEILLG+  Y   +D+WS   IF E++N
Sbjct:    2 TRYEKKQQLGEGTYGVVCKAWDTVCNRYVALKKIKQEREDDGIPVTSVREIAVLLELKHPNVVDLYDIYLEDKFLYLVFEFCDEDLYQFMSRSSKIPINETRSI---VYQILQGLAFCHYHQILHRDMKPQNILIN-KNGTIKLGEFGLARLTTINDRKYTSEVVTLWYRAPEILLGATQYGGAIDIWSTAAIFGELIN 196          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK15_MOUSE (Cell division protein kinase 15 OS=Mus musculus GN=Cdk15 PE=2 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 2.562e-52
Identity = 106/208 (50.96%), Postives = 142/208 (68.27%), Query Frame = 1
Query:  184 RRFVPFLSPSVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            ++ +PF      S Y  +EK+GEG+Y  VYK  + +  + +ALK I +  E EGVP TAIRE SLLK ++H NIV L D+VH+++ L  VFEY+  DL ++M   P   + P  ++ F++Q+LRG+AY H  RVLHRDLKPQNLL+      LKLADFGLARA  IP +T++ EVVTLWYR P+ LLG+  YS+ +D+W  GCIF EM
Sbjct:   90 KKSLPF---GAASSYLNLEKLGEGSYAKVYKGISRINGQLVALKVISMNAE-EGVPFTAIREASLLKGLKHANIVLLHDIVHTKETLTFVFEYMHTDLAQYMSQHPGGLH-PHNVRLFMFQLLRGLAYIHHQRVLHRDLKPQNLLLSH-LGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDALLGATEYSSELDIWGAGCIFIEM 291          
The following BLAST results are available for this feature:
BLAST of FC929471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2C_ANTMA6.726e-6157.97Cell division control protein 2 homolog C OS=Antir... [more]
CKB21_ARATH2.556e-6053.55Cyclin-dependent kinase B2-1 OS=Arabidopsis thalia... [more]
CKB22_ARATH3.338e-6056.65Cyclin-dependent kinase B2-2 OS=Arabidopsis thalia... [more]
CDC2D_ANTMA3.691e-5953.69Cell division control protein 2 homolog D OS=Antir... [more]
CDK14_HUMAN5.329e-5856.37Cell division protein kinase 14 OS=Homo sapiens GN... [more]
CDK14_MOUSE1.551e-5755.88Cell division protein kinase 14 OS=Mus musculus GN... [more]
CC2H2_TRYBB2.239e-5650.24Cell division control protein 2 homolog 2 OS=Trypa... [more]
CDK15_HUMAN1.961e-5250.96Cell division protein kinase 15 OS=Homo sapiens GN... [more]
CDK2_ENTHI2.562e-5251.26Cell division protein kinase 2 homolog OS=Entamoeb... [more]
CDK15_MOUSE2.562e-5250.96Cell division protein kinase 15 OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2CE06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2CE06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929471 ID=FC929471; Name=FC929471; organism=Citrus clementina; type=EST; length=815bp
GGCACGAGGCTAAAACTCACTTCTTTCACCGCCGCCGCTGCCTCCAATCA
CCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATCGTCCTCGCG
TCTGTTACTGTATTATGCATTTGTATTTTTCTCTTTCGTAAGCGGTTAAT
TTTTTCTTCATAACACACTGCCGCCACCTACGCCGTCGATTCGTGCCGTT
CTTGTCGCCGTCCGTCGGTAGCAAGTATGAAAAGGTTGAGAAGATTGGTG
AAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAATGAG
ACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTGTGCC
TAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCATGGGA
ACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTATCTG
GTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTTGCCC
AGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAAATTC
TACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGATTTG
AAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGCTTGC
AGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTTACAC
ATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGGATCT
CGCCATTACTCTACTCCAGTTGATGTGTGGTCGGTGGGATGTATATTTGC
TGAGATGGTGAACCA
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