FC929472
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929472 vs. ExPASy Swiss-Prot
Match: HS176_ARATH (17.6 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.6 PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.043e-44 Identity = 91/156 (58.33%), Postives = 118/156 (75.64%), Query Frame = 2 Query: 23 MGLDSSPLFSTLQHMMEMGADDSADNKSSNAPTRTYVRDAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKRE-EEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXXTIEVKIA 487 M L P+ S L+ M+E+ +D + K+ N P+R Y+RDAKAMAATPADV E+PN+Y F+VDMPG+K +IKVQVE+DNVL++SGER+RE +E +G KYVRMERR+GKFMRKF LPENA+++ ISAVC DGVL VTV TI+V++A Sbjct: 1 MDLGRFPIISILEDMLEV-PEDHNNEKTRNNPSRVYMRDAKAMAATPADVIEHPNAYAFVVDMPGIKGDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLPENADLDKISAVCHDGVLKVTVQKLPPPEPKKPKTIQVQVA 155
BLAST of FC929472 vs. ExPASy Swiss-Prot
Match: HS177_ARATH (17.7 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.7 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.712e-40 Identity = 82/150 (54.67%), Postives = 114/150 (76.00%), Query Frame = 2 Query: 41 PLFSTLQHMMEMGADDSADNKSSNAPTRTYVRDAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKRE-EEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXXTIEVKIA 487 P+FS L+ M+E A + K+ N P+R Y+RDAKAMAATPADV E+P++YVF VDMPG+K +I+VQ+E++NVL++SG+R+R+ +E +G K+VRMERR+GKFMRKF LP+NA++E ISA C DGVL VT+ TI+V++A Sbjct: 9 PIFSILEDMLE--APEEQTEKTRNNPSRAYMRDAKAMAATPADVIEHPDAYVFAVDMPGIKGDEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEKISAACNDGVLKVTIPKLPPPEPKKPKTIQVQVA 156
BLAST of FC929472 vs. ExPASy Swiss-Prot
Match: HSP19_ORYSJ (19.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP19.0 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.744e-31 Identity = 76/168 (45.24%), Postives = 107/168 (63.69%), Query Frame = 2 Query: 8 MDFRIMGLDSSPLFST-LQHMMEMGADDSADNKSSNAPTRTYVRDAKAMAATPADVKEYPNS--YVFIVDMPGLKSGDIKVQVEDDNVLLISGERKR-----EEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXXTIEVKIA 487 M+ ++G PL + +Q ++++ D + + N PTR YVRD +AMA TP DVKE S V VDMPG+ D++V+VED NVL ISGER+R ++ +G KY+RMERR+GKFMR+F LPE+A+++ + A +DGVLTVTVD +EVK+A Sbjct: 1 MELSVVG--GEPLLAVAMQQLLDLDLPDELE-RQLNPPTRAYVRDRRAMANTPMDVKELRASGALVLAVDMPGVAPADVRVEVEDGNVLAISGERRRPAGDGDDGGEGVKYLRMERRMGKFMRRFPLPESADLDGVRAEYKDGVLTVTVDKKPPPEPKKPRVVEVKVA 165
BLAST of FC929472 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.952e-22 Identity = 56/111 (50.45%), Postives = 73/111 (65.77%), Query Frame = 2 Query: 98 NKSSNAPTRTYVRDAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 430 N S+A + R+ A +T D KE P ++VF D+PGLK ++KVQ+EDD VL ISGER E+E + R+ER GKFMR+F LPENA VE + A ++GVLTVTV Sbjct: 34 NTLSSASFPEFSRENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGVLTVTV 144
BLAST of FC929472 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.952e-22 Identity = 52/109 (47.71%), Postives = 77/109 (70.64%), Query Frame = 2 Query: 104 SSNAPTRTYVRDAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 430 S+++P+ ++ R+ A +T D KE P ++VF D+PGLK ++KV+VEDD VL ISGER E+E ++ R+ER GKF+R+F LPENA ++ + A ++GVLTVTV Sbjct: 33 SNSSPSASFPRENPAFVSTRVDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFRLPENAKMDKVKASMENGVLTVTV 141
BLAST of FC929472 vs. ExPASy Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.681e-22 Identity = 54/109 (49.54%), Postives = 70/109 (64.22%), Query Frame = 2 Query: 104 SSNAPTRTYVRDAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 430 SS + RD A D KE P ++VF D+PGLK ++KV+VED NVL ISGER +E E+ K+ R+ER GKFMR+F LPENA +E + A ++GVLTV V Sbjct: 34 SSALANASTARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVV 142
BLAST of FC929472 vs. ExPASy Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.690e-22 Identity = 50/109 (45.87%), Postives = 76/109 (69.72%), Query Frame = 2 Query: 104 SSNAPTRTYVRDAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 430 +++A + ++ R+ A +T D KE P ++VF D+PG+K ++KV++EDD VL ISGER E+E ++ R+ER GKFMR+F LPENA ++ + A ++GVLTVTV Sbjct: 33 NNSALSASFPRENSAFVSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTV 141
BLAST of FC929472 vs. ExPASy Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.653e-21 Identity = 53/98 (54.08%), Postives = 69/98 (70.41%), Query Frame = 2 Query: 137 DAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 430 ++ A A T D KE P +VF VD+PGLK ++KV+VE+D VL ISGER E+E K+ RMER GKFMR+F LPENA ++ + A ++GVLTVTV Sbjct: 40 ESSAFANTRIDWKETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTV 137
BLAST of FC929472 vs. ExPASy Swiss-Prot
Match: HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.653e-21 Identity = 51/99 (51.52%), Postives = 70/99 (70.71%), Query Frame = 2 Query: 134 RDAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 430 RD A A D KE P S+VF D+PG+K ++KV+VE+ NVL+ISG+R +E+E K+ R+ER G+FMR+F LPENA V+ + A ++GVLTVTV Sbjct: 34 RDTAAFANARVDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASMENGVLTVTV 132
BLAST of FC929472 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.819e-21 Identity = 50/102 (49.02%), Postives = 76/102 (74.51%), Query Frame = 2 Query: 134 RDAKAMAATPA--DVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVD 433 +D +MA +PA D KE P +V ++D+PGLK +IKV+VE++ VL +SGERK+EEEK G + R+ER GKF R+F LP+N +++++ A ++GVLT+T+D Sbjct: 57 KDEASMAMSPARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLD 158 The following BLAST results are available for this feature:
BLAST of FC929472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929472 ID=FC929472; Name=FC929472; organism=Citrus clementina; type=EST; length=778bpback to top |