FC929480
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: SMUF1_HUMAN (E3 ubiquitin-protein ligase SMURF1 OS=Homo sapiens GN=SMURF1 PE=1 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 6.557e-27 Identity = 85/283 (30.04%), Postives = 143/283 (50.53%), Query Frame = 2 Query: 17 YGLFKETSD--HLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEADISE-LELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSAS---------EEALDRLPTSATCMNLLKL 829 YGLF+ ++D ++L NP S I+ HL +FHF+G ++ A+F G ++ F F +L K L+DL S+DPEL++ L+++ E DI+ L+ F + +N +G + EL P G+N+ VT EN ++ L N R I Q +GF +LI + + F++ E + NT + ++ ++ FW+ +++F E + + L+FVTG +R PL GFK +Q + G+A + D LP + TC N + + Sbjct: 460 YGLFQYSTDNIYMLQINPDSS-INPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWI--LENDITPVLDHTFCVEHNAFGRILQHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQKE-LELIIGGLDKIDLNDWKSNTR-LKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTRVPLQGFK------ALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDI 731
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: ITCH_MOUSE (E3 ubiquitin-protein ligase Itchy OS=Mus musculus GN=Itch PE=1 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 6.557e-27 Identity = 82/268 (30.60%), Postives = 124/268 (46.27%), Query Frame = 2 Query: 41 DHLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEADISELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYL-----EPLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 ++ L NP S I+ HL++F F+G +A A+F G +D F+ F ++ K L DL S+DPE Y LI++K + LE+YF + GE +L P G NI VT EN +I +V+ RL+ + +Q+ F GF +++ + ++ F+ E R Y I FW+ +K E + + L+FVTG R P+ GF L FCI++ + LP S TC N L L Sbjct: 580 NYCLQINPAS-YINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESIDPEFYNSLIWVKENNIEECGLEMYFSVDKEILGEIKSHDLKPNGGNILVTEENKEEYIRMVAEWRLSRGVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRH--AIYRHYTRTSKQIMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKE------NWLPRSHTCFNRLDL 838
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: SMUF1_MOUSE (E3 ubiquitin-protein ligase SMURF1 OS=Mus musculus GN=Smurf1 PE=1 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 8.564e-27 Identity = 85/283 (30.04%), Postives = 143/283 (50.53%), Query Frame = 2 Query: 17 YGLFKETSDHL--LYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEADISE-LELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSAS---------EEALDRLPTSATCMNLLKL 829 YGLF+ ++D++ L NP S I+ HL +FHF+G ++ A+F G ++ F F +L K L+DL S+DPEL++ L+++ E DI+ L+ F + +N +G + EL P G+N+ VT EN ++ L N R I Q +GF +LI + + F++ E + NT + ++ ++ FW+ +++F E + + L+FVTG +R PL GFK +Q + G+A + D LP + TC N + + Sbjct: 434 YGLFQYSTDNIYTLQINPDSS-INPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWI--LENDITPVLDHTFCVEHNAFGRILQHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQKE-LELIIGGLDKIDLNDWKSNTR-LKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTRVPLQGFK------ALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDI 705
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: WWP1_MOUSE (NEDD4-like E3 ubiquitin-protein ligase WWP1 OS=Mus musculus GN=Wwp1 PE=1 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 1.119e-26 Identity = 85/269 (31.60%), Postives = 127/269 (47.21%), Query Frame = 2 Query: 38 SDHLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEADISELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYL-----EPLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 +++ L NP S I+ HL +F F+G +A A+F G +D F+ F ++ K + DL S+D E Y LI+++ + LE+YF + G+ T +L GG NI VT EN +I L++ R + +++Q+ FL GF +++ W+ F+E E R NT Y Y I FW+ +K E + + L+FVTG R PL GF L FCI++ LP S TC N L L Sbjct: 633 NNYCLQINPAS-TINPDHLSYFCFIGRFIAMALFHGKFIDTGFSLPFYKRMLSKKLTIKDLESIDTEFYNSLIWIRDNNIEECGLEMYFSVDMEILGKVTSHDLKLGGSNILVTEENKDEYIGLMTEWRFSRGVQEQTKAFLDGFNEVVPLQWLQYFDEKELEVMLCGMQEVDLADWQR-NTVY-RHYTRNSKQIIWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAELMGSNGPQKFCIEKVGKDT------WLPRSHTCFNRLDL 892
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: WWP1_HUMAN (NEDD4-like E3 ubiquitin-protein ligase WWP1 OS=Homo sapiens GN=WWP1 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.119e-26 Identity = 85/269 (31.60%), Postives = 127/269 (47.21%), Query Frame = 2 Query: 38 SDHLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEADISELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYL-----EPLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 +++ L NP S I+ HL +F F+G +A A+F G +D F+ F ++ K + DL S+D E Y LI+++ + LE+YF + G+ T +L GG NI VT EN +I L++ R + +++Q+ FL GF +++ W+ F+E E R NT Y Y I FW+ +K E + + L+FVTG R PL GF L FCI++ LP S TC N L L Sbjct: 637 NNYCLQINPAS-TINPDHLSYFCFIGRFIAMALFHGKFIDTGFSLPFYKRMLSKKLTIKDLESIDTEFYNSLIWIRDNNIEECGLEMYFSVDMEILGKVTSHDLKLGGSNILVTEENKDEYIGLMTEWRFSRGVQEQTKAFLDGFNEVVPLQWLQYFDEKELEVMLCGMQEVDLADWQR-NTVY-RHYTRNSKQIIWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAELMGSNGPQKFCIEKVGKDT------WLPRSHTCFNRLDL 896
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: HECW1_MOUSE (E3 ubiquitin-protein ligase HECW1 OS=Mus musculus GN=Hecw1 PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 1.119e-26 Identity = 88/283 (31.10%), Postives = 140/283 (49.47%), Query Frame = 2 Query: 5 FDVQYGLFKETSD--HLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEADISE-LELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLE-----PLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 F+ YGLF+ +++ + + +P S + E +L++F F G +L A+ L+D F F L + L+DL LD E ++ L ++K + +I++ L+L F + +G+ TE EL GG N +VT +N +I + R+ + QQ+ LRGF +++ +++F+ E R NT Y GGYH H VI FW ++ F+ E + + L+FVTG S P GF L FCI++ S LP + TC N L L Sbjct: 1306 FNPYYGLFEYSANDTYTVQISPMSAFV-ENYLEWFRFSGRILGLALIHQYLLDAFFTRPFYKGLLKLPCDLSDLEYLDEEFHQSLQWMK--DNNITDILDLTFTVNEEVFGQVTERELKSGGANTQVTEKNKKEYIERMVKWRVERGVVQQTEALLRGFYEVVDSRLVSVFDARELELVIAGTAEIDLNDW-RNNTEYRGGYHDGHLVIRWFWAAVERFNNEQRLRLLQFVTGTSSVPYEGFAALRGSNGLRRFCIEKWGKITS------LPRAHTCFNRLDL 1578
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: SUDX_DROME (E3 ubiquitin-protein ligase Su(dx) OS=Drosophila melanogaster GN=Su(dx) PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.492e-26 Identity = 81/273 (29.67%), Postives = 127/273 (46.52%), Query Frame = 2 Query: 26 FKETSDHLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEADISELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYL-----EPLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 + +++ L NP S ++ HLQ+F F+G +A A++ G + F F ++ K + D+ ++DPE Y LI++K D LEL+F + G+ EL G+ RVT EN +I L++ R+ I QQ+ FL GF +++ +W+ F+E E R NT Y Y+ + FW+ ++ E + + L+FVTG R P+ GF L FCI++ LP S TC N L L Sbjct: 660 YANKNNYSLQINPAS-YVNPDHLQYFKFIGRFIAMALYHGRFIYSGFTMPFYKRMLNKKLTIKDIETIDPEFYNSLIWVKDNNIDECGLELWFSVDFEVLGQIIHHELKENGEKERVTEENKEEYITLMTEWRMTRGIEQQTKTFLEGFNEVVPLEWLKYFDERELELILCGMQDVDVEDWQR-NTIY-RHYNRNSKQVVWFWQFVRETDNEKRARLLQFVTGTCRVPVGGFAELMGSNGPQRFCIEKVGKET------WLPRSHTCFNRLDL 923
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: SMUF2_MOUSE (E3 ubiquitin-protein ligase SMURF2 OS=Mus musculus GN=Smurf2 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.250e-26 Identity = 87/279 (31.18%), Postives = 140/279 (50.18%), Query Frame = 2 Query: 17 YGLFKETSDHL--LYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEADISE-LELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLE-----PLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 YGLF+ + D + L NP S ++ +HL +FHF+G ++ A+F G +D F F +L K L+D+ +DP+L+ L+++ E DI+ L+ F + +N YGE + EL P GK+I VT EN ++ L N R I Q +GF ++I + + F+E E + NT + + V++ FW+ ++ F E + + L+FVTG SR PL GFK L+ LF I + + + LP + TC N + + Sbjct: 454 YGLFQYSRDDIYTLQINPDSA-VNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKSITLDDMELVDPDLHNSLVWI--LENDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIPVTEENKKEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKTFDEKE-LELIICGLGKIDVSDWKVNTR-LKHCTPDSNVVKWFWKAVEFFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQI-----DACTNNLPKAHTCFNRIDI 722
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: SMUF2_DANRE (E3 ubiquitin-protein ligase SMURF2 OS=Danio rerio GN=smurf2 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.250e-26 Identity = 85/279 (30.47%), Postives = 140/279 (50.18%), Query Frame = 2 Query: 17 YGLFKETSDHL--LYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEADIS-ELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLE-----PLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 YGLF+ + D + L NP S ++ +HL +FHF+G ++ A+F G +D F F +L K L+D+ S+DP+L+ L+++ + DI+ L+ F + +N YGE + EL P GK+I VT + ++ L N R I Q +GF ++I + + F+E E + NT + + +++ FW ++S+ E + + L+FVTG SR PL GFK L+ LF I + S + LP + TC N + + Sbjct: 471 YGLFQYSRDDIYTLQINPDSA-VNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKPITLDDMESVDPDLHNSLVWI--LDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIPVTQDTKKEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKAFDEKE-LELIVCGLGKIDINDWKSNTR-LKHCTPDSNIVKWFWRAVESYDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDAST-----NNLPKAHTCFNRIDI 739
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: SMUF2_HUMAN (E3 ubiquitin-protein ligase SMURF2 OS=Homo sapiens GN=SMURF2 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.109e-25 Identity = 85/279 (30.47%), Postives = 139/279 (49.82%), Query Frame = 2 Query: 17 YGLFKETSDHL--LYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEADIS-ELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLE-----PLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 YGLF+ + D + L NP S ++ +HL +FHF+G ++ A+F G +D F F +L K L+D+ +DP+L+ L+++ E DI+ L+ F + +N YGE + EL P GK+I V EN ++ L N R I Q +GF ++I + + F+E E + NT + + +++ FW+ ++ F E + + L+FVTG SR PL GFK L+ LF I + + + LP + TC N + + Sbjct: 454 YGLFQYSRDDIYTLQINPDSA-VNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKSITLDDMELVDPDLHNSLVWI--LENDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIPVNEENKKEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKTFDEKE-LELIICGLGKIDVNDWKVNTR-LKHCTPDSNIVKWFWKAVEFFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQI-----DACTNNLPKAHTCFNRIDI 722 The following BLAST results are available for this feature:
BLAST of FC929480 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929480 ID=FC929480; Name=FC929480; organism=Citrus clementina; type=EST; length=829bpback to top |