FC929480
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: RSP5_YEAST (E3 ubiquitin-protein ligase RSP5 OS=Saccharomyces cerevisiae GN=RSP5 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.138e-25 Identity = 81/282 (28.72%), Postives = 140/282 (49.65%), Query Frame = 2 Query: 5 FDVQYGLFKETS--DHLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEADISELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLE-----PLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 F+ Y LF+ ++ ++ + NP SG I+ +HL +F F+G ++ +F +D F + RK L D+ +D E+Y L ++ D L+L F + +GE +L P G+NI VT+ N ++ L + R+ ++++Q F+ GF +LI +D + +F+E E +++T+Y GY VI+ FW+ + + E + + L+F TG SR P+ GFK L+ F I++A + +LP S TC N + L Sbjct: 512 FNPFYCLFEYSAYDNYTIQINPNSG-INPEHLNYFKFIGRVVGLGVFHRRFLDAFFVGALYKMMLRKKVVLQDMEGVDAEVYNSLNWMLENSID-GVLDLTFSADDERFGEVVTVDLKPDGRNIEVTDGNKKEYVELYTQWRIVDRVQEQFKAFMDGFNELIPEDLVTVFDERE-LELLIGGIAEIDIEDWKKHTDY-RGYQESDEVIQWFWKCVSEWDNEQRARLLQFTTGTSRIPVNGFKDLQGSDGPRRFTIEKAG------EVQQLPKSHTCFNRVDL 783
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: UBE3A_HUMAN (Ubiquitin-protein ligase E3A OS=Homo sapiens GN=UBE3A PE=1 SV=4) HSP 1 Score: 111.309 bits (277), Expect = 6.786e-24 Identity = 80/278 (28.78%), Postives = 126/278 (45.32%), Query Frame = 2 Query: 5 FDVQYGLFK-ETSDHLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEADISE-LELYFVILNNE-YGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 F+ G+F + S L + NP S Q F +GI+L A++ ++D+ F KL K DL P LY+ L L YE ++ + + + F I + +G +L G I +TNEN F++L S++ LN + +Q F RGF + + + E + T Y GGY + +I FWE++ SF+ E ++ FL+F TG R P+ G L+ + + + +RLPTS TC N+L L Sbjct: 583 FNPDIGMFTYDESTKLFWFNPSSFETEGQ----FTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGTFRDLGDSHPVLYQSLKDLLEYEGNVEDDMMITFQISQTDLFGNPMMYDLKENGDKIPITNENRKEFVNLYSDYILNKSVEKQFKAFRRGFHMVTNESPLKYLFRPEEIELLICGSRNLDFQALEETTEYDGGYTRDSVLIREFWEIVHSFTDEQKRLFLQFTTGTDRAPVGGLGKLKMII-------AKNGPDTERLPTSHTCFNVLLL 849
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: PUB2_SCHPO (E3 ubiquitin-protein ligase pub2 OS=Schizosaccharomyces pombe GN=pub2 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.851e-22 Identity = 78/282 (27.66%), Postives = 134/282 (47.52%), Query Frame = 2 Query: 5 FDVQYGLFKETSD--HLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEADISELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLE-----PLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 F+ Y LF+ +D + L +P S ++ +F F+G ++ A++ +D+ F F ++ +K L D+ +D Y L ++K+ + D S L L F + N +GE +L+P G+NI V N+N + ++ ++ H+L +Q + G +LI + +FNE+E R T+Y Y ++ FWE+L +S E + K L+F TG SR PL GFK + F I++ + +LP + TC N L + Sbjct: 374 FNPGYSLFEYATDDNYGLQISPLSS-VNPDFRSYFRFVGRVMGLAIYHRRYLDVQFVLPFYKRILQKPLCLEDVKDVDEVYYESLKWIKNNDVDES-LCLNFSVEENRFGESVTVDLIPNGRNIAVNNQNKMNYLKALTEHKLVTSTEEQFNALKGGLNELIPDSVLQIFNENELDTLLNGKRDIDVQDWKR-FTDY-RSYTETDDIVIWFWELLSEWSPEKKAKLLQFATGTSRLPLSGFKDMHGSDGPRKFTIEKVG------HISQLPKAHTCFNRLDI 645
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: K0317_HUMAN (Protein KIAA0317 OS=Homo sapiens GN=KIAA0317 PE=2 SV=3) HSP 1 Score: 105.531 bits (262), Expect = 3.724e-22 Identity = 85/290 (29.31%), Postives = 133/290 (45.86%), Query Frame = 2 Query: 5 FDVQYGLFKETSDH---LLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGIL-------VDIPFATFFLSK---LKRKYNYLNDLPSLDPELYRHLIFLKHYEADISELELYFVILNNEYGEQTEE--ELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 FD LF SD+ L++PNP L+ + F G L+ K ++E L V F FL++ L+ Y Y + DPE Y+ + D+SE+EL F Q ++ EL+ GG VTN N I +++L++ +RL Q++++ HFL+G +L+ ++ + +F+E+E G +H V+ FW V+ S + E + L+F TG S+ P GF L P F I A ++ LPT+ TC N L L Sbjct: 519 FDTTNQLFTRFSDNNQALVHPNPNRPA--HLRLKMYEFAGRLVGKCLYESSLGGAYKQLVRARFTRSFLAQIIGLRMHYKYFE---TDDPEFYKSKVCFI-LNNDMSEMELVFAEEKYNKSGQLDKVVELMTGGAQTPVTNANKIFYLNLLAQYRLASQVKEEVEHFLKGLNELVPENLLAIFDENELELLMCGTGDISVSDFKAHAVVVGGSWHFREKVMRWFWTVVSSLTQEELARLLQFTTGSSQLPPGGFAALCPSFQIIAAPTHST------LPTAHTCFNQLCL 796
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: K0317_MOUSE (Protein KIAA0317 OS=Mus musculus GN=Kiaa0317 PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 8.295e-22 Identity = 80/283 (28.27%), Postives = 131/283 (46.29%), Query Frame = 2 Query: 17 YGLFKETSDHLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGIL-------VDIPFATFFLSK---LKRKYNYLNDLPSLDPELYRHLIFLKHYEADISELELYFVILNNEYGEQTEE--ELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 + F +++ L++PNP L+ + F G L+ K ++E L V F FL++ L+ Y Y + DPE Y+ + D+SE+EL F Q ++ EL+ GG VTN N I +++L++ +RL Q++++ HFL+G +L+ ++ + +F+E+E G +H V+ FW V+ S + E + L+F TG S+ P GF L P F I A ++ LPT+ TC N L L Sbjct: 526 FARFTDSNQALVHPNPNRPA--HLRLKMYEFAGRLVGKCLYESSLGGAYKQLVRARFTRSFLAQIIGLRMHYKYFE---TDDPEFYKSKVCFI-LNNDMSEMELVFAEEKYNKSGQLDKIVELMTGGAQTPVTNANKIFYLNLLAQYRLASQVKEEVEHFLKGLNELVPENLLAIFDENELELLMCGTGDINVSDFKAHAVVVGGSWHFREKVMRWFWAVVSSLTQEELARLLQFTTGSSQLPPGGFAALCPSFQIIAAPTHST------LPTAHTCFNQLCL 796
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: HERC4_HUMAN (Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.295e-22 Identity = 82/276 (29.71%), Postives = 122/276 (44.20%), Query Frame = 2 Query: 8 DVQYGLFKETSDHLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHY-EADISELE-LYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 D +YG+F+ D L + FH +G++ A++ +VD+ F KL +K L+DL L P++ R + L Y E DI E L F I +G +EL+ G + V +N F+ ++ N + F GF ++ + +F +E + NT Y G Y +EH I++FWEV LE +K+FL F+TG R P+LG K L+ IQ G + LP S TC NLL L Sbjct: 767 DPKYGMFRYYEDSRLIWFSDKTF---EDSDLFHLIGVICGLAIYNCTIVDLHFPLALYKKLLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNFTITVENFGATEVKELVLNGADTAVNKQNRQEFVDAYVDYIFNKSVASLFDAFHAGFHKVCGGKVLLLFQPNELQAMVIGNTNYDWKELEK-NTEYKGEYWAEHPTIKIFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSLK--LVIQSTGGGE-----EYLPVSHTCFNLLDL 1031
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: HERC4_RAT (Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus GN=Herc4 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.083e-21 Identity = 82/276 (29.71%), Postives = 122/276 (44.20%), Query Frame = 2 Query: 8 DVQYGLFKETSDHLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHY-EADISELE-LYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 D +YG+F+ D L + FH +G++ A++ +VD+ F KL ++ L+DL L P++ R + L Y E DI E L F I +G +EL+ G + V +N F+ ++ N + F GF ++ + +F +E + NT Y G Y +EH I++FWEV LE +K+FL F+TG R P+LG K L+ IQ G S LP S TC NLL L Sbjct: 767 DPKYGMFRYYEDSRLIWFSDKTF---EDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKKLLKRKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNFTITVENFGATEVKELVLNGADTAVNKQNRQEFVDAYVDYIFNKSVASLFDAFHAGFHKVCGGKVLLLFQPNELQAMVIGNTNYDWKELEK-NTEYKGEYWAEHPTIKIFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSLK--LVIQSTGGGES-----YLPVSHTCFNLLDL 1031
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: UBE3A_MOUSE (Ubiquitin-protein ligase E3A OS=Mus musculus GN=Ube3a PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.117e-21 Identity = 80/278 (28.78%), Postives = 121/278 (43.53%), Query Frame = 2 Query: 5 FDVQYGLFK-ETSDHLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEADISE-LELYFVILNNE-YGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 F+ G+F + + L + NP S Q F +GIL A++ ++D+ F KL K DL P LY+ L L YE + + + + F I + +G +L G I +TNEN F+ S++ LN + +Q F RGF + + + E + T Y GGY E VI FWE++ SF+ E ++ FL F TG R P+ G L+ + + + +RLPTS TC N+L L Sbjct: 594 FNPDIGMFTYDEATKLFWFNPSSFETEGQ----FTLIGIL-GLAIYNNCILDVHFPMVVYRKLMGKKGTFRDLGDSHPVLYQSLKDLLEYEGSVEDDMMITFQISQTDLFGNPMMYDLKENGDKIPITNENRKEFVISYSDYILNKSVEKQFKAFRRGFHMVTNESPLKYLFRPEEIELLICGSRNLDFQALEETTEYDGGYTRESVVIREFWEIVHSFTDEQKRLFLLFTTGTDRAPVGGLGKLKMII-------AKNGPDTERLPTSHTCFNVLLL 859
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: HERC4_MOUSE (Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4 PE=2 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 5.377e-21 Identity = 81/276 (29.35%), Postives = 121/276 (43.84%), Query Frame = 2 Query: 8 DVQYGLFKETSDHLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHY-EADISELE-LYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 D +YG+F+ D L + FH +G++ A++ +VD+ F KL ++ L+DL L P + R + L Y E DI E L F I +G +EL+ G + V +N F+ ++ N + F GF ++ + +F +E + NT Y G Y ++H I++FWEV LE +K+FL F+TG R P+LG K L+ IQ G S LP S TC NLL L Sbjct: 767 DPKYGMFRYYEDSRLIWFSDKTF---EDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKKLLKRKPSLDDLKELMPAVGRSMQQLLDYPEDDIEETFCLNFTITVENFGATEVKELVLNGADTAVNRQNRQEFVDAYVDYIFNKSVASLFDAFHAGFHKVCGGKVLLLFQPNELQAMVIGNTNYDWKELEK-NTEYKGEYWADHPTIKIFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSLK--LVIQSTGGGES-----YLPVSHTCFNLLDL 1031
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: HERC3_HUMAN (Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.564e-20 Identity = 79/274 (28.83%), Postives = 117/274 (42.70%), Query Frame = 2 Query: 17 YGLFKETSD-HLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEA-DISELE-LYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 YG+F D +LL+ + + H +FH +GI A++ +VD+ F KL L DL L P R L L Y D+ E L F I YG +++L+PGG N+ V +N F+ N+ + + + F GF ++ + +F E + Y G Y + H +++FWE F LE +KKFL F+TG R P+ G L+ IQ A + LP + TC NLL L Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHN----WFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKPGLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNFTICRESYGVIEQKKLIPGGDNVTVCKDNRQEFVDAYVNYVFQISVHEWYTAFSSGFLKVCGGKVLELFQPSELRAMMVGNSNYNWEEL-EETAIYKGDYSATHPTVKLFWETFHEFPLEKKKKFLLFLTGSDRIPIYGMASLQ--IVIQSTASGE-----EYLPVAHTCYNLLDL 1024 The following BLAST results are available for this feature:
BLAST of FC929480 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929480 ID=FC929480; Name=FC929480; organism=Citrus clementina; type=EST; length=829bpback to top |