FC929480
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: HERC5_HUMAN (Probable E3 ubiquitin-protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.764e-20 Identity = 76/277 (27.44%), Postives = 119/277 (42.96%), Query Frame = 2 Query: 14 QYGLFKETSDHLLYPNPGSGMIHEQHLQF----FHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEADISELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSA-TCMNLLKL 829 +YG+F +YP S M +F + F G+L ++F + ++PF KL + L DL L P+L ++L L E D E F I N + ++ + L+P G +I V N ++ N+ N ++ F RGF ++ +D I +F+ E + N Y GY+S H I MFW+ +LE +KKFL F+TG R + ++ FC E +R P A TC ++L L Sbjct: 741 EYGMF-------MYPEGASCMWFPVKPKFEKKRYFFFGVLCGLSLFNCNVANLPFPLALFKKLLDQMPSLEDLKELSPDLGKNLQTLLDDEGD--NFEEVFYIHFNVHWDRNDTNLIPNGSSITVNQTNKRDYVSKYINYIFNDSVKAVYEEFRRGFYKMCDEDIIKLFHPEELKDVIVGNTDYDWKTFEK-NARYEPGYNSSHPTIVMFWKAFHKLTLEEKKKFLVFLTGTDRLQMKDLNNMKITFC-------CPESWNERDPIRALTCFSVLFL 1000
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: UPL4_ARATH (E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana GN=UPL4 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.260e-18 Identity = 78/280 (27.86%), Postives = 122/280 (43.57%), Query Frame = 2 Query: 50 LYPNPGSGMIHEQH-LQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLK------------HYEADISELELYF-------VILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 L+P P SG LQ F LG ++AKA+ +G ++D+P + F + + D+ +DPEL + L+ L+ H ++ ++ +L F + L T+ +L P N V +N+ +I + N + I++Q F GF Q+ + + +FNE E + + GY S +E ++L F E Q+ FL+FVTG R P G L P I R GS S + LP+ TC N LKL Sbjct: 1198 LFPRPWSGTSTTSDVLQKFVLLGTVVAKALQDGRVLDLPLSKAFYKLILGQELSSFDIHFVDPELCKTLVELQALVRRKKLFAEAHGDSGAAKCDLSFHGTKIEDLCLEFALPGYTDYDLAPYSANDMVNLDNLEEYIKGIVNATVCNGIQKQVEAFRSGFNQVFSIEHLRIFNEEELETMLCGECDLFSMNEVLDHIKFDHGYTSSSPPVEYLLQILHEFDREQQRAFLQFVTGSPRLPHGGLASLSPKLTIVRKHGSDSSDT--DLPSVMTCANYLKL 1475
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: UFD4_YEAST (Ubiquitin fusion degradation protein 4 OS=Saccharomyces cerevisiae GN=UFD4 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.710e-17 Identity = 71/277 (25.63%), Postives = 123/277 (44.40%), Query Frame = 2 Query: 47 LLYPNPGSGMIH-EQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYN-YLNDLPS-----------LDPELYRHLIFLKHYEAD---ISELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 LL+P P + + E+ ++ F +LG +A+++ + ++D F+ F L R + +PS +DP L + L ++ + D + L L F + N+ + EL+PGG N + + NV +IH V + L I +Q F+ GF ++ + + + E N N GY + +I F ++ +F ++ FL+F+TG + P+ GFK L P F + A + LP+ TC N LKL Sbjct: 1185 LLFPEPLNPFSNNEKVIELFGYLGTFVARSLLDNRILDFRFSKVFFELLHRMSTPNVTTVPSDVETCLLMIELVDPLLAKSLKYIVANKDDNMTLESLSLTFTVPGND-----DIELIPGGCNKSLNSSNVEEYIHGVIDQILGKGIEKQLKAFIEGFSKVFSYERMLILFPDELVDIFGRVEEDWSMATLYTNLNAEHGYTMDSSIIHDFISIISAFGKHERRLFLQFLTGSPKLPIGGFKSLNPKFTVVLKHAEDGLTADEYLPSVMTCANYLKL 1456
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: HUL4_ASHGO (Probable E3 ubiquitin-protein ligase HUL4 OS=Ashbya gossypii GN=HUL4 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.710e-17 Identity = 69/269 (25.65%), Postives = 111/269 (41.26%), Query Frame = 2 Query: 32 ETSDHLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEADISELELYFVILNNEYGEQTEE------ELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXX-RQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMN 817 E+ +H L GS + ++ G++L A++ ++D+ F F K+ + +ND L PE +++ + Y+ + E +++ + + ++ +E +L P G VT EN + L + LN I F GF +I+ + +F E R T Y GG+ V++ FWE+L Q+K L FVTG R P G + F I R A DRLP S TC N Sbjct: 555 ESIEHELLQGEGSSS------ELYYLFGVVLGLAIYNSTILDLKFPRAFYKKICGEVLSVNDFLELYPETGTNMLKMLEYDGEDFE-DIFALTFETCFPDRFDESKIHYRQLCPDGSTQAVTRENKHEYFRLWMDFYLNRSIAPGFESFRNGFFHVIEGNSFRLFGSEELEQLVCGSNEQSLDVSMLRSVTRYQGGFDDNSPVVQWFWEILSEMEYPQQRKLLHFVTGSDRVPATGVTTIP--FRISRIRSGA-----DRLPLSHTCFN 809
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: TRIPC_HUMAN (Probable E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens GN=TRIP12 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.049e-16 Identity = 79/269 (29.37%), Postives = 116/269 (43.12%), Query Frame = 2 Query: 101 FHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYL--NDLPSLDPELYRHLIFL-------KHYEADISELE---LYFVILNNEYGEQTEE-------------ELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHE-XXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 F FLG L+AKA+ + LVD+P F + R+ L +DL +DP + R + L K E D S+ + Y + G E+ EL GGK+I VT N+ ++ LV LN + +Q F GF+ + + F E + GY + ++ +E+L SF E Q+ FL+FVTG R P+ GF+ L P I R ++E D LP+ TC+N LKL Sbjct: 1697 FRFLGKLMAKAIMDFRLVDLPLGLPFYKWMLRQETSLTSHDLFDIDPVVARSVYHLEDIVRQKKRLEQDKSQTKESLQYALETLTMNGCSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVSRQFDSFRDGFESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDHGYTHDSRAVKFLFEILSSFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKL 1965
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: HERC6_HUMAN (Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6 PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 3.053e-16 Identity = 74/277 (26.71%), Postives = 122/277 (44.04%), Query Frame = 2 Query: 14 QYGLFKETSDHLLYPNPGSGMIHE-----QHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEADISELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 +YG+F +YP GS M + ++F F G+L ++F + ++PF KL + L DL L P L + L + AD ++ I + + +Q + +L+P G +I V N ++ ++ N ++ F RGF ++ +K+ + F E QN+ Y GY H I++FW+ +L+ +KKFL F+TG R G + +E +F R + SE PTS TC N+L L Sbjct: 732 EYGMF-------MYPEMGSCMWFPAKPKPEKKRYFLF-GMLCGLSLFNLNVANLPFPLALYKKLLDQKPSLEDLKELSPRLGKSLQEVLDDAAD--DIGDALCIRFSIHWDQNDVDLIPNGISIPVDQTNKRDYVSKYIDYIFNVSVKAVYEEFQRGFYRVCEKEILRHFYPEELMTAIIGNTDYDWKQF-EQNSKYEQGYQKSHPTIQLFWKAFHKLTLDEKKKFLFFLTGRDRLHARGIQKMEIVF---RCPETFSER---DHPTSITCHNILSL 991
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: HECD2_MOUSE (Probable E3 ubiquitin-protein ligase HECTD2 OS=Mus musculus GN=Hectd2 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.802e-16 Identity = 77/259 (29.73%), Postives = 109/259 (42.08%), Query Frame = 2 Query: 101 FHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNY--------------LNDLPSLDPELYRHLIFLKHYEADISELELY--FVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 F +GIL+ A++ I +DI F KL ++DL + PEL L L YE ++ E + Y F + E+G L PGG I VTN+N ++ L ++ LN I +Q + F GF + + + + E R +T Y GY I FW+V+ F LE QKK L F TG R P+ G L F I S +E + + LP + TC N L L Sbjct: 500 FRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPVVPSDQSTPVGICSVTIDDLCQVMPELAHGLKELLSYEGNVEE-DFYSTFQVFQEEFGVIKSYNLKPGGDKIPVTNQNRREYVQLYTDFLLNKSIYKQFAAFYCGFHSVCASNALMLLRPEEVEILVCGSPELDMHALQR-STQY-DGYAKTDLTIRYFWDVVLGFPLELQKKLLHFTTGSDRVPVGGMADLN--FKI-----SKNETSTNWLPVAHTCFNQLCL 748
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: HECD2_PONAB (Probable E3 ubiquitin-protein ligase HECTD2 OS=Pongo abelii GN=HECTD2 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.979e-15 Identity = 76/259 (29.34%), Postives = 111/259 (42.86%), Query Frame = 2 Query: 101 FHFLGILLAKAMFEGILVDIPFATFFLSKL------KRKYNY--------LNDLPSLDPELYRHLIFLKHYEADISELELY--FVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 F +GIL+ A++ I +DI F KL N ++DL + PEL L L +E ++ E + Y F + E+G L PGG I VTN+N ++ L ++ LN I +Q + F GF + + + + E R +T Y GY I+ FW+V+ F L+ QKK L F TG R P+ G L F I S +E + + LP + TC N L L Sbjct: 502 FRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPIIPSDQNIPVGICSVTVDDLCQIMPELAHGLSELLSHEGNVEE-DFYSTFQVFQEEFGIIKSYNLKPGGDKISVTNQNRKEYVQLYTDFLLNKSIYKQFAAFYYGFHSVCASNALMLLRPEEVEILVCGSPDLDMHALQR-STQY-DGYAKTDLTIKYFWDVVLGFPLDLQKKLLHFTTGSDRVPVGGMADLN--FKI-----SKNETSTNCLPVAHTCFNQLCL 750
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: HECD2_HUMAN (Probable E3 ubiquitin-protein ligase HECTD2 OS=Homo sapiens GN=HECTD2 PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.979e-15 Identity = 76/259 (29.34%), Postives = 111/259 (42.86%), Query Frame = 2 Query: 101 FHFLGILLAKAMFEGILVDIPFATFFLSKL------KRKYNY--------LNDLPSLDPELYRHLIFLKHYEADISELELY--FVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 F +GIL+ A++ I +DI F KL N ++DL + PEL L L +E ++ E + Y F + E+G L PGG I VTN+N ++ L ++ LN I +Q + F GF + + + + E R +T Y GY I+ FW+V+ F L+ QKK L F TG R P+ G L F I S +E + + LP + TC N L L Sbjct: 502 FRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPIIPSDQNIPVGICNVTVDDLCQIMPELAHGLSELLSHEGNVEE-DFYSTFQVFQEEFGIIKSYNLKPGGDKISVTNQNRKEYVQLYTDFLLNKSIYKQFAAFYYGFHSVCASNALMLLRPEEVEILVCGSPDLDMHALQR-STQY-DGYAKTDLTIKYFWDVVLGFPLDLQKKLLHFTTGSDRVPVGGMADLN--FKI-----SKNETSTNCLPVAHTCFNQLCL 750
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: HUL4_YEAST (Probable E3 ubiquitin-protein ligase HUL4 OS=Saccharomyces cerevisiae GN=HUL4 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.585e-15 Identity = 70/269 (26.02%), Postives = 108/269 (40.15%), Query Frame = 2 Query: 56 PNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEAD----ISELELYFVILNNEY--------GEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQK-DWINMFN--EHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMN 817 PN L+ ++ G+++ A+F ++D+ F KL + D L PE R+LI + +Y D + L NN + E EL G+N+ +T N F+ L I Q + F+ GF+++ + + I +FN E E R T YVGG+ + + FWE+++S+ QKK L+FVT R P G + F I S D LP + TC N Sbjct: 600 PNFDKSKGKNSQLELYYLFGVVMGLAIFNSTILDLQFPKALYKKLCSEPLSFEDYSELFPETSRNLIKMLNYTEDNFEDVFSLTFETTYRNNNWILNDSKSSKEYVTVELCENGRNVPITQSNKHEFVMKWVEFYLEKSIEPQYNKFVSGFKRVFAECNSIKLFNSEELERLVCGDEEQTKFDFKSLRSVTKYVGGFSDDSRAVCWFWEIIESWDYPLQKKLLQFVTASDRIPATGISTIP--FKISLLGSHDS----DDLPLAHTCFN 862 The following BLAST results are available for this feature:
BLAST of FC929480 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929480 ID=FC929480; Name=FC929480; organism=Citrus clementina; type=EST; length=829bpback to top |