FC929507
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929507 vs. ExPASy Swiss-Prot
Match: YJ2D_SCHPO (Uncharacterized transporter C4B3.13 OS=Schizosaccharomyces pombe GN=SPCC4B3.13 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.448e-17 Identity = 54/202 (26.73%), Postives = 101/202 (50.00%), Query Frame = -1 Query: 193 SAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYE--XXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELA 792 SA++T+ Q++G+ YEM+G++LQR +L L + +++ IL+FL + P AA ++ ++ AYAL +++FLQ Q I P YI + +++ L+++ V+ + W +YI+K + + W GF+ +A +L+ +M+C E W F+++ +G+L ELA Sbjct: 156 SALDTVGTQSFGSGNYEMVGLHLQRILAILLLIQFPIFLIWWKIEGILLFLRQDPLTCMFAAKYMRVMMLASPAYALFEALKRFLQVQGIFHPVTYILAIVVPINIFLNYLFVWSPWVGFGFLGAPVAVALTLWSACAVLIIYIMKVNG-RQAWGGFSREALKNWGPLCRLAVPGVIMICSEYWAFELVTFASGVLGTTELA 356
BLAST of FC929507 vs. ExPASy Swiss-Prot
Match: YL47_SCHPO (Uncharacterized transporter C323.07c OS=Schizosaccharomyces pombe GN=SPAC323.07c PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.544e-13 Identity = 57/206 (27.67%), Postives = 97/206 (47.09%), Query Frame = -1 Query: 181 SAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYE--XXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSL 792 S+++TL QA+GANK + IYLQR ++L + I + ++++ ILIFL + P +A ++ I YA+ ++++LQAQ I P Y+ +++LL+++ V+ ++W I +YI S W GF+ QA L S +M+ E +++ L AG L LA S+ Sbjct: 150 SSLDTLATQAFGANKPYNVAIYLQRCLLILAVLHIPVALIWLNLEHILIFLHQDPMVAHLCGRYMRVFILAAPGYAVFEALKRYLQAQGIFTPITYVLCFAAPLNILLNYLLVWHPTIGFGFLGAPVAVATTFWFQSICLILYICFSS-TPIPWPGFSRQALKNLSPMLHFSFHGMLMIVTEWAAYEMTSLGAGYLGTAPLASQSI 354
BLAST of FC929507 vs. ExPASy Swiss-Prot
Match: S47A2_PONAB (Multidrug and toxin extrusion protein 2 OS=Pongo abelii GN=SLC47A2 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.339e-13 Identity = 55/210 (26.19%), Postives = 98/210 (46.67%), Query Frame = -1 Query: 181 MGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIA----SSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSL 798 + SA +TL Q++G+ + +G+ LQR A++L L + L++ ++ IL+ + P+++ +F+ GL P IF Y L + K+LQ Q I P V+ + ++ V S + + +YIV TW G++ Q FF L+ S +M+C+E W ++I L GLL +L+ ++ Sbjct: 88 LSSACDTLMSQSFGSPNKKHVGVILQRGALVLLLCCLPCWALFLNTQHILLLFRQDPEVSRLTQDYVMIFIPGL-PVIFLYNL---LAKYLQNQKITWPQVLSGVVGNCVNGVANYALVSVLNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSMLMICVEWWAYEIGSFLMGLLSVVDLSAQAV 293
BLAST of FC929507 vs. ExPASy Swiss-Prot
Match: S47A2_RABIT (Multidrug and toxin extrusion protein 2 OS=Oryctolagus cuniculus GN=SLC47A2 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.401e-13 Identity = 54/200 (27.00%), Postives = 95/200 (47.50%), Query Frame = -1 Query: 211 MGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIA----SSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLL 798 + SA +TL Q++G+ + +G+ LQR +++L L + L++ ++ IL+ + P ++ A +F+ GL P IF Y+L + K+LQ Q IV P V+ + ++ V S ++ F++IV TW G++ Q F L+ S +M+C+E W ++I L GLL Sbjct: 117 LSSACDTLMSQSFGSPNKKHVGVILQRGSLILLLCCLPCWALFLNTQHILLLFRQDPAVSRLTQDYAMIFIPGL-PAIFLYSL---LAKYLQNQGIVWPQVLSGVVGNCVNGVANYALVSVLNLGVRGSAYANTISQFVQAAFLFLHIVLKKLHLETWEGWSSQCLRDWGPFLSLAIPSMLMMCVEWWAYEIGSFLMGLL 312
BLAST of FC929507 vs. ExPASy Swiss-Prot
Match: YD338_YEAST (Uncharacterized transporter YDR338C OS=Saccharomyces cerevisiae GN=YDR338C PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.396e-11 Identity = 50/207 (24.15%), Postives = 98/207 (47.34%), Query Frame = -1 Query: 184 MGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYE--XXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDS 798 + ++++TLC QAYG+ ++ +G++LQR + I V++ +S P+L ++ ++ + + F+ LI AY +++FLQAQ I Y+ T +++L+S+ V+ ++W++ Y + D K W GF+ +AF+ L+ + +ML E +++L L + LA S Sbjct: 285 IATSLDTLCPQAYGSGRFYSVGVHLQRCIAFSLVIYIPFAVMWWYSEPLLSYIIPEKELINLTSRFLRVLILGAPAYIFFENLKRFLQAQGIFDAGIYVLTICAPLNVLVSYTLVWNKYIGVGFIGAAIAVVLNFWLMFFLLLFYALYIDGRK-CWGGFSRKAFTHWNDLGHLAFSGIIMLEAEELSYELLTLFSAYYGVSYLAAQS 490 The following BLAST results are available for this feature:
BLAST of FC929507 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929507 ID=FC929507; Name=FC929507; organism=Citrus clementina; type=EST; length=858bpback to top |