FC929547

Overview
NameFC929547
Unique NameFC929547
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length840
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929547 vs. ExPASy Swiss-Prot
Match: PPI1_STAAC (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain COL) GN=SACOL0957 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.307e-14
Identity = 59/174 (33.91%), Postives = 77/174 (44.25%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAK----------------------------TEWLDGKHVVFGQVVERMDVLKAIEKVGSSSGRTNKPV 836
            G +  +LF ++ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   K                            T WLD KH VFGQ+++    L+ I    +  G  +KP+
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLTDGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKPL 185          
BLAST of FC929547 vs. ExPASy Swiss-Prot
Match: PPI1_STAAB (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB0821 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.307e-14
Identity = 59/174 (33.91%), Postives = 77/174 (44.25%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAK----------------------------TEWLDGKHVVFGQVVERMDVLKAIEKVGSSSGRTNKPV 836
            G +  +LF ++ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   K                            T WLD KH VFGQ+++    L+ I    +  G  +KP+
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKPL 185          
BLAST of FC929547 vs. ExPASy Swiss-Prot
Match: PPI1_STAA8 (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_00891 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.307e-14
Identity = 59/174 (33.91%), Postives = 77/174 (44.25%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAK----------------------------TEWLDGKHVVFGQVVERMDVLKAIEKVGSSSGRTNKPV 836
            G +  +LF ++ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   K                            T WLD KH VFGQ+++    L+ I    +  G  +KP+
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKPL 185          
BLAST of FC929547 vs. ExPASy Swiss-Prot
Match: PPI1_STAA3 (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_0857 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.307e-14
Identity = 59/174 (33.91%), Postives = 77/174 (44.25%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAK----------------------------TEWLDGKHVVFGQVVERMDVLKAIEKVGSSSGRTNKPV 836
            G +  +LF ++ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   K                            T WLD KH VFGQ+++    L+ I    +  G  +KP+
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKPL 185          
BLAST of FC929547 vs. ExPASy Swiss-Prot
Match: PPIL2_USTMA (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Ustilago maydis GN=CYP8 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.707e-14
Identity = 65/178 (36.52%), Postives = 85/178 (47.75%), Query Frame = 3
Query:  318 VFFSPINQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE---NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVV--ERMDVLKAIEKVGSSSGRTNKPV 836
            V FS I     P+ K +  ++      G + +EL     P+T  NF  LC       K GK   Y  + FHR IPGFM Q             SI+ S F DE       KH   G+LSMAN G  TN SQFF+       LDGKH VFG++V  ++   L  +E+V S  G T++P+
Sbjct:  280 VMFSHIKSR--PSSKAYVRLSTN---FGALNLELHCGKAPKTCFNFLQLC-------KHGK---YDDTLFHRNIPGFMIQGGDPTGTGRGG-SSIWNSNFRDEFNEPGAFKHDTRGVLSMANKGKDTNASQFFITYRGVPHLDGKHTVFGRLVDGDKDATLTKMEQVPSEQG-TDRPL 440          
BLAST of FC929547 vs. ExPASy Swiss-Prot
Match: CYPR_YEAST (Peptidyl-prolyl cis-trans isomerase CPR4 OS=Saccharomyces cerevisiae GN=CPR4 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.911e-14
Identity = 51/147 (34.69%), Postives = 69/147 (46.94%), Query Frame = 3
Query:  366 FFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGI--GKSGKPLH---YKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAK--TEWLDGKHVVFGQVVERMDVL 785
            +FD          +  EL+  V P+T  NF  L  G K +  GK    +H   Y+ +  ++V P    Q             ++YG KF DENF  KH  P  L+MA  GP +N S+F + T     E LDGK VVFGQ+   +D L
Sbjct:   55 YFDPVSKSMKEADLTFELYGTVVPKTVNNFAMLAHGVKAVIEGKDPNDIHTYSYRKTKINKVYPNKYIQGGVVAPDVGPF--TVYGPKFDDENFYLKHDRPERLAMAYFGPDSNTSEFIITTKADGNEELDGKSVVFGQITSGLDQL 199          
BLAST of FC929547 vs. ExPASy Swiss-Prot
Match: SDC10_MOUSE (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Mus musculus GN=Sdccag10 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.469e-14
Identity = 51/143 (35.66%), Postives = 70/143 (48.95%), Query Frame = 3
Query:  339 QSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 764
            Q    N KV    T     AG I +EL++   P+   NF  LC             +Y  + FHRV+PGF+ Q            ESIYG+ F DE   + +    G+++MANAGP  NGSQFF    + + L+ KH +FG+V
Sbjct:    7 QEPPTNGKVLLKTT-----AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGTGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of FC929547 vs. ExPASy Swiss-Prot
Match: SDC10_RAT (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Rattus norvegicus GN=Sdccag10 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.106e-13
Identity = 50/143 (34.97%), Postives = 70/143 (48.95%), Query Frame = 3
Query:  339 QSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 764
            Q    N KV    T     AG I +EL++   P+   NF  LC             +Y  + FHRV+PGF+ Q            ES+YG+ F DE   + +    G+++MANAGP  NGSQFF    + + L+ KH +FG+V
Sbjct:    7 QEPPTNGKVLLKTT-----AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGTGG-ESVYGAPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of FC929547 vs. ExPASy Swiss-Prot
Match: SDC10_BOVIN (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Bos taurus GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.887e-13
Identity = 51/143 (35.66%), Postives = 69/143 (48.25%), Query Frame = 3
Query:  339 QSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 764
            Q    N KV    T     AG I +EL++   P+   NF  LC             +Y  + FHRV+PGF+ Q            ESIYG  F DE   + +    G+++MANAGP  NGSQFF    + + L+ KH +FG+V
Sbjct:    7 QEPPTNGKVLLKTT-----AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGTGG-ESIYGVPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of FC929547 vs. ExPASy Swiss-Prot
Match: PPIL3_USTMA (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Ustilago maydis GN=CYP10 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.887e-13
Identity = 52/139 (37.41%), Postives = 68/139 (48.92%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVE------RMDVLKAI 794
            G I +E+F D TPR AENF   C              Y    +HR I  FM Q            +SI+G  FADE     K    GI++ ANAGP TN SQFF+  AK   LDGK+ + G+V++       +D ++AI
Sbjct:   10 GDIKVEVFCDATPRAAENFLGHCAAGT----------YNDVKWHRNIKSFMIQTGDPTGTGKGG-QSIWGKPFADEIRSSLKFDRRGIVACANAGPDTNKSQFFITYAKQPHLDGKYTIIGKVIDGAEDGGTLDAMEAI 137          
The following BLAST results are available for this feature:
BLAST of FC929547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 230
Match NameE-valueIdentityDescription
PPI1_STAAC1.307e-1433.91Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAB1.307e-1433.91Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAA81.307e-1433.91Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAA31.307e-1433.91Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPIL2_USTMA1.707e-1436.52Peptidyl-prolyl cis-trans isomerase-like 2 OS=Usti... [more]
CYPR_YEAST2.911e-1434.69Peptidyl-prolyl cis-trans isomerase CPR4 OS=Saccha... [more]
SDC10_MOUSE8.469e-1435.66Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Mu... [more]
SDC10_RAT1.106e-1334.97Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ra... [more]
SDC10_BOVIN1.887e-1335.66Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Bo... [more]
PPIL3_USTMA1.887e-1337.41Peptidyl-prolyl cis-trans isomerase-like 3 OS=Usti... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2DA08RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2DA08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929547 ID=FC929547; Name=FC929547; organism=Citrus clementina; type=EST; length=840bp
GGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCATTAGCAACCAC
TTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGCCCCACGTAGT
CTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTTATTAGTTTCC
ACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACATCGTTGTTCCG
GGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGGATGTCCATGC
TAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCACGAGGATCAG
AAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATG
CCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCCGCCGG
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAAGTCCGGCAAG
CCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCAAAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACGTTG
TGTTCGGTCAAGTCGTCGAAAGAATGGACGTCCTCAAGGCCATCGAGAAA
GTGGGGTCCAGCTCCGGAAGGACCAACAAGCCCGTCGTGA
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