FC929548
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: FYN_HUMAN (Proto-oncogene tyrosine-protein kinase Fyn OS=Homo sapiens GN=FYN PE=1 SV=3) HSP 1 Score: 95.1301 bits (235), Expect = 5.136e-19 Identity = 70/198 (35.35%), Postives = 99/198 (50.00%), Query Frame = 3 Query: 72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659 +G+G FG V+ VA+K L T F E + + K+KH LV L Y EE + +V EYM GSL +L++ G L +A A G+A++ + IHRD++++NIL+ K+ADFGLARLI E + PE GR T + DV+SFG++L ELVT G+ P Sbjct: 277 LGNGQFGEVWMGTWNGNTKVAIKTLKPG-TMSPESFLEEAQIMKKLKHDKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFLKDGEG--RALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 466
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: FYN_BOVIN (Proto-oncogene tyrosine-protein kinase Fyn OS=Bos taurus GN=FYN PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.136e-19 Identity = 70/198 (35.35%), Postives = 99/198 (50.00%), Query Frame = 3 Query: 72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659 +G+G FG V+ VA+K L T F E + + K+KH LV L Y EE + +V EYM GSL +L++ G L +A A G+A++ + IHRD++++NIL+ K+ADFGLARLI E + PE GR T + DV+SFG++L ELVT G+ P Sbjct: 277 LGNGQFGEVWMGTWNGNTKVAIKTLKPG-TMSPESFLEEAQIMKKLKHDKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFLKDGEG--RALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 466
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: NTRK2_RAT (BDNF/NT-3 growth factors receptor OS=Rattus norvegicus GN=Ntrk2 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.708e-19 Identity = 65/213 (30.52%), Postives = 104/213 (48.83%), Query Frame = 3 Query: 72 IGDGGFGTVYKAAL------PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEV---------LGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659 +G+G FG V+ A D VAVK L A ++F E E L ++H+++V G C G+ ++V+EYM +G L+ +LR + L + IA A G+ +L + H +HRD+ N L+ E K+ DFG++R + + + + V ++PPE + TT DV+S GV+L E+ T GK+P Sbjct: 543 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 752
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: NTRK2_MOUSE (BDNF/NT-3 growth factors receptor OS=Mus musculus GN=Ntrk2 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.708e-19 Identity = 65/213 (30.52%), Postives = 104/213 (48.83%), Query Frame = 3 Query: 72 IGDGGFGTVYKAAL------PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEV---------LGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659 +G+G FG V+ A D VAVK L A ++F E E L ++H+++V G C G+ ++V+EYM +G L+ +LR + L + IA A G+ +L + H +HRD+ N L+ E K+ DFG++R + + + + V ++PPE + TT DV+S GV+L E+ T GK+P Sbjct: 543 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 752
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: NTRK2_HUMAN (BDNF/NT-3 growth factors receptor OS=Homo sapiens GN=NTRK2 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.708e-19 Identity = 65/213 (30.52%), Postives = 104/213 (48.83%), Query Frame = 3 Query: 72 IGDGGFGTVYKAAL------PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEV---------LGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659 +G+G FG V+ A D VAVK L A ++F E E L ++H+++V G C G+ ++V+EYM +G L+ +LR + L + IA A G+ +L + H +HRD+ N L+ E K+ DFG++R + + + + V ++PPE + TT DV+S GV+L E+ T GK+P Sbjct: 544 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 753
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: M3K9_MOUSE (Mitogen-activated protein kinase kinase kinase 9 OS=Mus musculus GN=Map3k9 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.708e-19 Identity = 76/222 (34.23%), Postives = 112/222 (50.45%), Query Frame = 3 Query: 69 IIGDGGFGTVYKAALPDGKTVAVKKL----SQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVL-GWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE--------AKVADFGLARLISACETHVSTDI--AGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEG 689 IIG GGFG VY+A G VAVK + +Q E + +KH N++ L G C LV E+ G L+ L + ++L W A ARG+ +LH IIHRD+K+SNIL+ ++ E ++ DFGLAR E H +T + AGT+ ++ PE ++ + DV+S+GV+L EL+TG+ P F+ I+G Sbjct: 142 IIGIGGFGKVYRAFWA-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILEITDFGLAR-----EWHRTTKMSAAGTYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP----FRGIDG 347
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: FGR_MOUSE (Proto-oncogene tyrosine-protein kinase Fgr OS=Mus musculus GN=Fgr PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.708e-19 Identity = 71/206 (34.47%), Postives = 104/206 (50.49%), Query Frame = 3 Query: 48 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659 N+ +G G FG V+ VAVK L T + F E + + ++H LV L Y EE + +V E+M GSL +L++R G +L +A A G+A++ + IHRD++A+NIL+ E K+ADFGLARLI E + + PE GR T + DV+SFG++L EL+T G+ P Sbjct: 249 NSIALERRLGTGCFGDVWLGTWNCSTKVAVKTLKPG-TMSPKAFLEEAQIMKLLRHDKLVQL--YAVVSEEPIYIVTEFMCYGSLLDFLKDREGQNLML--PHLVDMAAQVAEGMAYMER---MNYIHRDLRAANILVGEYLICKIADFGLARLIEDNEYNPQQGTKFPIKWTAPEAALFGRFTVKSDVWSFGILLTELITKGRVP 446
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: EPHA7_RAT (Ephrin type-A receptor 7 OS=Rattus norvegicus GN=Epha7 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.708e-19 Identity = 70/206 (33.98%), Postives = 108/206 (52.43%), Query Frame = 3 Query: 69 IIGDGGFGTVYKAALP-DGK---TVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL-HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTF--GYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659 +IG G FG V L GK VA+K L T+ R +F E +G+ H N+V L G + G+ ++V E+M NG+LD +LR G V+ + + G A G+ +L G+ +HRD+ A NIL+N KV+DFGL+R+I V T G + PE Q + T+ DV+S+G+++ E+++ G+ P Sbjct: 638 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVI---QLVGMLRGIAAGMRYLADMGY----VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 836
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: EPHA7_HUMAN (Ephrin type-A receptor 7 OS=Homo sapiens GN=EPHA7 PE=1 SV=3) HSP 1 Score: 94.7449 bits (234), Expect = 6.708e-19 Identity = 70/206 (33.98%), Postives = 108/206 (52.43%), Query Frame = 3 Query: 69 IIGDGGFGTVYKAALP-DGK---TVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL-HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTF--GYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659 +IG G FG V L GK VA+K L T+ R +F E +G+ H N+V L G + G+ ++V E+M NG+LD +LR G V+ + + G A G+ +L G+ +HRD+ A NIL+N KV+DFGL+R+I V T G + PE Q + T+ DV+S+G+++ E+++ G+ P Sbjct: 638 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVI---QLVGMLRGIAAGMRYLADMGY----VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 836
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: Y5020_ARATH (Probable inactive receptor kinase At5g10020 OS=Arabidopsis thaliana GN=At5g10020 PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 8.760e-19 Identity = 67/234 (28.63%), Postives = 115/234 (49.15%), Query Frame = 3 Query: 69 IIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYC--SFGEEKLLVYEYMVNGSLDLWLRNRT-GSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE-EFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGR--STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 752 ++G GT+YKA L +G + VK L + ++F E + +G +KH N+VPL Y +E+LL+ +Y+ SL + L T + + +R K+A A+ L +LH P H ++K +NI+L+ + ++ D+ + RL++ GY PE + + T + DVY+FGVIL+EL+T + +L WV ++G+ D +D Sbjct: 773 VLGRSSHGTLYKATLDNGHMLTVKWLRVGLVRHKKDFAREAKKIGSLKHPNIVPLRAYYWGPREQERLLLSDYLRGESLAMHLYETTPRRYSPMSFSQRLKVAVEVAQCLLYLHDRAMP---HGNLKPTNIILSSPDNTVRITDYCVHRLMTPSGVAEQILNMSALGYSAPELSSASKPIPTLKSDVYAFGVILMELLTRRSAGDIISGQTGAVDLTDWVRLCDQEGRRMDCID 1003 The following BLAST results are available for this feature:
BLAST of FC929548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929548 ID=FC929548; Name=FC929548; organism=Citrus clementina; type=EST; length=846bpback to top |