FC929548

Overview
NameFC929548
Unique NameFC929548
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length846
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: EPHA7_MOUSE (Ephrin type-A receptor 7 OS=Mus musculus GN=Epha7 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.144e-18
Identity = 70/206 (33.98%), Postives = 109/206 (52.91%), Query Frame = 3
Query:   69 IIGDGGFGTVY--KAALPDGKTVAV--KKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL-HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTF--GYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            +IG G FG V   +  LP  + VAV  K L    T+  R +F  E   +G+  H N+V L G  + G+  ++V E+M NG+LD +LR   G   V+   +   +  G A G+ +L   G+    +HRD+ A NIL+N     KV+DFGL+R+I      V T   G     +  PE  Q  + T+  DV+S+G+++ E+++ G+ P
Sbjct:  638 VIGAGEFGEVCSGRLKLPGQRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVI---QLVGMLRGIAAGMRYLADMGY----VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 836          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: YES_MOUSE (Proto-oncogene tyrosine-protein kinase Yes OS=Mus musculus GN=Yes1 PE=1 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 1.494e-18
Identity = 70/198 (35.35%), Postives = 100/198 (50.51%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            +G G FG V+         VA+K L    T     F  E + + K++H  LVPL  Y    EE + +V E+M  GSL  +L+   G  + L   +   +A   A G+A++      + IHRD++A+NIL+ E    K+ADFGLARLI   E            +  PE    GR T + DV+SFG++  ELVT G+ P
Sbjct:  281 LGQGCFGEVWMGTWNGTTKVAIKTLKPG-TMMPEAFLQEAQIMKKLRHDKLVPL--YAVVSEEPIYIVTEFMSKGSLLDFLKEGDG--KYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGENLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILQTELVTKGRVP 470          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: SRC64_DROME (Tyrosine-protein kinase Src64B OS=Drosophila melanogaster GN=Src64B PE=1 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 1.494e-18
Identity = 66/192 (34.38%), Postives = 95/192 (49.48%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT 647
            +G G FG V+     +   VAVK L +  T     F  E   + K +H  LV L   CS  E   +V EYM  GSL  +LR   G    L ++    IA   A G+ +L    +  +IHRD+ A N+L+ E   AK+ DFGLAR+I+  E            +  PE    G+ + + DV+S+G++L+EL T
Sbjct:  290 LGRGNFGEVFYGKWRNSIDVAVKTLREG-TMSTAAFLQEAAIMKKFRHNRLVALYAVCSQEEPIYIVQEYMSKGSLLDFLREGDG--RYLHFEDLIYIATQVASGMEYLE---SKQLIHRDLAARNVLIGENNVAKICDFGLARVIADDEYCPKQGSRFPVKWTAPEAIIYGKFSIKSDVWSYGILLMELFT 475          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: PKNA2_BIFLO (Probable serine/threonine-protein kinase pknA2 OS=Bifidobacterium longum GN=pknA2 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.494e-18
Identity = 74/251 (29.48%), Postives = 119/251 (47.41%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQG-HRE-----FTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE------FKDI-EGGNLVGWVFQKMKKGQAADVLDPTVLTADSKP 782
            I +GG  TVY+A     G+TVA+K +     +G HRE     F  E  +   + + ++V +     F     LV EY V+G   + LR+   +       +  ++      GLA  H      ++HRDIK  NIL+N+    ++ DFGLA+  S      +  + GT  Y+ PE  ++ ++T +GD+YS G++  E++TGK P   +      FK + E    V  V Q +    AA +   T    D++P
Sbjct:   20 IAEGGMATVYEAIDERLGRTVAIKVMHTQLAKGPHREQFVERFRREANSAASIANPHIVQVYDTGEFNGLDFLVMEY-VHG---VNLRHEMNAQGTFSVRETLRVVAETLDGLASAHRA---GVVHRDIKPENILINDRGHVQITDFGLAKAASQATLSSTGMLLGTAAYLAPEMIENNQATAQGDLYSVGIMAWEMLTGKVPFDSDNPVTLVFKHVHEDVPSVATVCQGIDPSVAAFIAHLTARQVDARP 263          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: M3K11_RAT (Mitogen-activated protein kinase kinase kinase 11 OS=Rattus norvegicus GN=Map3k11 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.494e-18
Identity = 73/212 (34.43%), Postives = 101/212 (47.64%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQG----HREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVL-GWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEA--------KVADFGLARLISACETHVSTDI--AGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 659
            +IG GGFG VY+ +   G+ VAVK   Q   +           E      + H N++ L   C       LV EY   G L   L  R     VL  W      A   ARG+ +LH      +IHRD+K++NILL +  E         K+ DFGLAR     E H +T +  AGT+ ++ PE  ++   +   DV+SFGV+L EL+TG+ P
Sbjct:  123 VIGIGGFGKVYRGSWR-GELVAVKAARQDPDEDISVTAESVRQEARLFAMLAHPNIIALKAVCLEEPNLCLVMEYAAGGPLSRALAGRRVPPHVLVNW------AVQIARGMHYLHCEALVPVIHRDLKSNNILLLQPIEGDDMEHKTLKITDFGLAR-----EWHKTTQMSAAGTYAWMAPEVIKASTFSKGSDVWSFGVLLWELLTGEVP 322          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: M3K11_MOUSE (Mitogen-activated protein kinase kinase kinase 11 OS=Mus musculus GN=Map3k11 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.494e-18
Identity = 73/212 (34.43%), Postives = 101/212 (47.64%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQG----HREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVL-GWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEA--------KVADFGLARLISACETHVSTDI--AGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 659
            +IG GGFG VY+ +   G+ VAVK   Q   +           E      + H N++ L   C       LV EY   G L   L  R     VL  W      A   ARG+ +LH      +IHRD+K++NILL +  E         K+ DFGLAR     E H +T +  AGT+ ++ PE  ++   +   DV+SFGV+L EL+TG+ P
Sbjct:  123 VIGIGGFGKVYRGSWR-GELVAVKAARQDPDEDISVTAESVRQEARLFAMLAHPNIIALKAVCLEEPNLCLVMEYAAGGPLSRALAGRRVPPHVLVNW------AVQIARGMHYLHCEALVPVIHRDLKSNNILLLQPIEGDDMEHKTLKITDFGLAR-----EWHKTTQMSAAGTYAWMAPEVIKASTFSKGSDVWSFGVLLWELLTGEVP 322          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: SRK3_SPOLA (Tyrosine-protein kinase SRK3 (Fragment) OS=Spongilla lacustris GN=SRK3 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.952e-18
Identity = 66/198 (33.33%), Postives = 100/198 (50.51%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            +G G FG V+ A + +G T    K  +  T   ++F  E + + K+ H NL+ L   C+ GE   +V E M  GS+  +L++  G    L   +   ++   A G+ +L  H +    IHRD+ A NIL+ E    KVADFGLAR+I     +          +  PE     R T + DV+SFGV++ E+VT G+ P
Sbjct:   72 LGQGNFGEVW-AGVWNGTTAVAVKTLKPDTMEVKDFVQEAQVMKKIHHPNLLQLYAVCTIGEPIYIVTELMKYGSMLEYLKHGEGKNITL--HQMVDMSAQIASGMTYLEAHSY----IHRDLAARNILVGEGNVCKVADFGLARVIKEDIYNPREGTKFPIKWTAPEAALYNRFTIKSDVWSFGVLISEIVTHGRMP 262          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: MET_RABIT (Hepatocyte growth factor receptor OS=Oryctolagus cuniculus GN=MET PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.952e-18
Identity = 74/215 (34.42%), Postives = 112/215 (52.09%), Query Frame = 3
Query:   63 TNIIGDGGFGTVYKAAL--PDGKTV--AVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVPLLGYCSFGE-EKLLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 671
            + +IG G FG VY   L   DGK +  AVK L++    G   +F  E   +    H N++ LLG C   E   L+V  YM +G L  ++RN T +    +++G+  +       A+G+ +L    +   +HRD+ A N +L+E+F  KVADFGLAR +   E    H  T       ++  E  Q+ + TT+ DV+SFGV+L EL+T   P  P+
Sbjct: 1082 SEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 1287          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: FRK_HUMAN (Tyrosine-protein kinase FRK OS=Homo sapiens GN=FRK PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.952e-18
Identity = 67/228 (29.39%), Postives = 116/228 (50.88%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV---STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 743
            +G G FG V++    +   VAVK L       + +F  E + +  ++H  L+ L   C+  +   ++ E M +GSL  +L+N TGS   L   ++  +A   A G+A+L    + + IHRD+ A N+L+ E    KVADFGLAR+       +     +I     +  PE  +S + + + DV+SFG++L E++T GK P    +  + G  ++  + Q  +  Q ++
Sbjct:  240 LGSGQFGEVWEGLWNNTTPVAVKTLKPGSMDPN-DFLREAQIMKNLRHPKLIQLYAVCTLEDPIYIITELMRHGSLQEYLQNDTGSKIHL--TQQVDMAAQVASGMAYLE---SRNYIHRDLAARNVLVGEHNIYKVADFGLARVFKVDNEDIYESRHEIKLPVKWTAPEAIRSNKFSIKSDVWSFGILLYEIITYGKMP----YSGMTGAQVIQMLAQNYRLPQPSN 457          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: EPB1B_XENLA (Ephrin type-B receptor 1-B (Fragment) OS=Xenopus laevis GN=ephb1-B PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.952e-18
Identity = 66/208 (31.73%), Postives = 111/208 (53.37%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAAL--PDGK--TVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            +IG G FG VYK  L  P  +  +VA+K L    ++  R +F +E   +G+  H N++ L G  +     +++ E+M NG+LD +LR   G   V+   +   +  G A G+ +L      + +HRD+ A NIL+N     KV+DFGL+R +   +T   T  +   G IP     PE  +  + T+  DV+S+G+++ E+++ G+ P
Sbjct:  542 VIGAGEFGEVYKGRLKLPSKREISVAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVI---QLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQD-DTSDPTYTSSLGGKIPVRWTAPEAIRYRKFTSASDVWSYGIVMWEVMSYGERP 742          
The following BLAST results are available for this feature:
BLAST of FC929548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EPHA7_MOUSE1.144e-1833.98Ephrin type-A receptor 7 OS=Mus musculus GN=Epha7 ... [more]
YES_MOUSE1.494e-1835.35Proto-oncogene tyrosine-protein kinase Yes OS=Mus ... [more]
SRC64_DROME1.494e-1834.38Tyrosine-protein kinase Src64B OS=Drosophila melan... [more]
PKNA2_BIFLO1.494e-1829.48Probable serine/threonine-protein kinase pknA2 OS=... [more]
M3K11_RAT1.494e-1834.43Mitogen-activated protein kinase kinase kinase 11 ... [more]
M3K11_MOUSE1.494e-1834.43Mitogen-activated protein kinase kinase kinase 11 ... [more]
SRK3_SPOLA1.952e-1833.33Tyrosine-protein kinase SRK3 (Fragment) OS=Spongil... [more]
MET_RABIT1.952e-1834.42Hepatocyte growth factor receptor OS=Oryctolagus c... [more]
FRK_HUMAN1.952e-1829.39Tyrosine-protein kinase FRK OS=Homo sapiens GN=FRK... [more]
EPB1B_XENLA1.952e-1831.73Ephrin type-B receptor 1-B (Fragment) OS=Xenopus l... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2DA09RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2DA09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929548 ID=FC929548; Name=FC929548; organism=Citrus clementina; type=EST; length=846bp
AGCAACCTCTCATGAGACTAACTTTGGTTCATATTCTTGAAGCCACAAAC
AACTTCTGCAAGACAAATATTATTGGAGATGGTGGCTTTGGAACTGTATA
CAAAGCCGCTTTGCCTGATGGGAAAACAGTTGCTGTTAAGAAGTTAAGCC
AGGCTAAAACACAGGGGCACCGTGAATTCACTGCTGAAATGGAAACTCTG
GGCAAGGTGAAGCACCAGAATCTTGTGCCGCTGCTTGGTTACTGCTCATT
TGGTGAGGAGAAGCTTCTTGTTTATGAATACATGGTAAATGGAAGCTTGG
ATCTGTGGTTAAGAAATCGGACGGGTTCTCTTGAAGTTCTTGGCTGGGAT
AAACGCTACAAAATTGCATGTGGCGCTGCTCGTGGGCTAGCTTTTCTTCA
TCACGGCTTCACCCCACATATCATTCATCGCGATATCAAAGCAAGCAACA
TCTTACTCAATGAAGAGTTTGAAGCCAAAGTTGCAGACTTTGGGCTTGCT
AGACTGATCAGTGCATGCGAGACACATGTTAGCACTGATATTGCAGGCAC
ATTTGGTTACATTCCCCCCGAGTATGGGCAGAGTGGGAGATCTACCACAA
GGGGTGATGTATACAGCTTTGGTGTAATCTTGCTGGAATTGGTGACTGGA
AAAGAGCCTACGGGGCCCGAATTCAAAGATATAGAAGGTGGGAACTTGGT
CGGTTGGGTGTTTCAGAAGATGAAGAAGGGACAGGCTGCTGATGTTCTAG
ATCCTACAGTCCTTACTGCAGATTCAAAGCCCATGATGCTTAAAATGCTC
CGGATTGCTGGTGATTGCCTCTCTGATAACCCTGCTATGAGGCCTA
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