FC929548

Overview
NameFC929548
Unique NameFC929548
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length846
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15034 contig Ccv1_Contig15034:1..846. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: HCK_MACFA (Tyrosine-protein kinase HCK OS=Macaca fascicularis GN=HCK PE=2 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 1.265e-17
Identity = 64/192 (33.33%), Postives = 97/192 (50.52%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT 647
            +G G FG V+ A       VAVK +    +     F AE   +  ++H  LV L    +  E   ++ E+M  GSL  +L++  GS + L   K    +   A G+AF+      + IHRD++A+NIL++     K+ADFGLAR+I   E            +  PE    G ST + DV+SFG++L+E+VT
Sbjct:  246 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANLMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARIIEDNEYTAREGAKFPIKWTAPEAINFGSSTIKSDVWSFGILLMEIVT 430          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: EPHA3_HUMAN (Ephrin type-A receptor 3 OS=Homo sapiens GN=EPHA3 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.265e-17
Identity = 70/217 (32.26%), Postives = 111/217 (51.15%), Query Frame = 3
Query:   36 LEATNNFCKTNIIGDGGFGTVY--KAALPDGK--TVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHH-GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG--TFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            L+ATN      ++G G FG V   +  LP  K  +VA+K L    T+  R +F  E   +G+  H N++ L G  +  +  ++V EYM NGSLD +LR       V+   +   +  G A G+ +L   G+    +HRD+ A NIL+N     KV+DFGL+R++        T   G     +  PE     + T+  DV+S+G++L E+++ G+ P
Sbjct:  616 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 824          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: CDC7_SCHPO (Cell division control protein 7 OS=Schizosaccharomyces pombe GN=cdc7 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.265e-17
Identity = 65/199 (32.66%), Postives = 103/199 (51.76%), Query Frame = 3
Query:   72 IGDGGFGTVYKAA-LPDGKTVAVKK--LSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 659
            +G G FG VY+   + +G+TVAVKK  LS+           E++ L  + H N+V   G     +   ++ EY  NGSL    +N     E L     +++     +GL +LH+     +IHRDIK +NIL  ++   K+ADFG+A  I+A E H    + G+  ++ PE  +   +TT  D++S G  ++EL+ G  P
Sbjct:   15 LGKGAFGAVYRGLNIKNGETVAVKKVKLSKMLKSDLSVIKMEIDLLKNLDHPNIVKYRGSYQTNDSLCIILEYCENGSLRSICKNFGKIPENLVALYTFQVL----QGLLYLHN---QGVIHRDIKGANILTTKDGTIKLADFGVATKINALEDH---SVVGSPYWMAPEVIELVGATTASDIWSVGCTVIELLDGNPP 203          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: BTKL_DROME (Tyrosine-protein kinase Btk29A OS=Drosophila melanogaster GN=Btk29A PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.265e-17
Identity = 64/199 (32.16%), Postives = 98/199 (49.25%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTG 665
            +G G FG V +         AVK + +  T    +F  E + + K++H NLV L G CS      +V EYM +GSL  +LR    +L +        +    ++G+ +L      + IHRD+ A N L+  E   KVADFGLAR +   +   S        + PPE     R +++ DV+++GV++ E+ T GK P G
Sbjct:  532 LGSGQFGVVRRGKWRGSIDTAVKMMKEG-TMSEDDFIEEAKVMTKLQHPNLVQLYGVCSKHRPIYIVTEYMKHGSLLNYLRRHEKTL-IGNMGLLLDMCIQVSKGMTYLER---HNYIHRDLAARNCLVGSENVVKVADFGLARYVLDDQYTSSGGTKFPIKWAPPEVLNYTRFSSKSDVWAYGVLMWEIFTCGKMPYG 725          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: ABL_DROME (Tyrosine-protein kinase Abl OS=Drosophila melanogaster GN=Abl PE=1 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 1.265e-17
Identity = 67/203 (33.00%), Postives = 105/203 (51.72%), Query Frame = 3
Query:   57 CKTNI-----IGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT 647
            C+T+I     +G G +G VY+A     G TVAVK L +  T   ++F  E   + ++KH NLV L+G C+      ++ E+M +G+L  +L  R+   E L       +A   A G+++L    + + IHRD+ A N L+ +    KVADFGLARL+                +  PE     + +T+ DV++FGV+L E+ T
Sbjct:  367 CRTDIMMKHKLGGGQYGEVYEAVWKRYGNTVAVKTLKE-DTMALKDFLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEFMSHGNLLDFL--RSAGRETLDAVALLYMATQIASGMSYLE---SRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIAT 563          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: TNI3K_MOUSE (Serine/threonine-protein kinase TNNI3K OS=Mus musculus GN=Tnni3k PE=2 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 68/203 (33.50%), Postives = 104/203 (51.23%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHRE----FTAEMETLGKVKHQNLVPLLGYCSFGEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE-YGQSGRSTTRGDVYSFGVILLELVTGKEP 659
            IIG G FG VYK    + K VA+K+  +A T   +     F  E+  L ++ H  +V  +G C     +  +V +Y+  GSL   L  +     +L    +  IA   A+G+ +LH   T  IIHRD+ + NILL E+  A VADFG +R + + +    T   G   ++ PE + Q  R T + DV+S+ + L EL+ G+ P
Sbjct:  467 IIGSGSFGKVYKGRCRN-KIVAIKRY-RANTYCSKSDVDMFCREVSILCQLNHPCVVQFVGACLDDPSQFAIVTQYISGGSLFSLLHEQK---RILDLQSKLIIAVDVAKGMEYLH-SLTQPIIHRDLNSHNILLYEDGHAVVADFGESRFLQSLDEDNMTKQPGNLRWMAPEVFTQCTRYTIKADVFSYALCLWELLIGEIP 663          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: RMIL_AVII1 (Serine/threonine-protein kinase-transforming protein Rmil OS=Avian retrovirus IC10 GN=V-RMIL PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 64/200 (32.00%), Postives = 102/200 (51.00%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE-THVSTDIAGTFGYIPPE---YGQSGRSTTRGDVYSFGVILLELVTGKEP 659
            IG G FGTVYK        V +  ++    Q  + F  E+  L K +H N++  +GY S   +  +V ++    SL   L       E++   K   IA   A+G+ +LH      IIHRD+K++NI L+E+   K+ DFGLA + S    +H    ++G+  ++ PE          + + DVY+FG++L EL+TG+ P
Sbjct:   73 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 265          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: RMIL_AVEVR (Serine/threonine-protein kinase-transforming protein Rmil OS=Avian rous-associated virus type 1 GN=V-RMIL PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 64/200 (32.00%), Postives = 102/200 (51.00%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE-THVSTDIAGTFGYIPPE---YGQSGRSTTRGDVYSFGVILLELVTGKEP 659
            IG G FGTVYK        V +  ++    Q  + F  E+  L K +H N++  +GY S   +  +V ++    SL   L       E++   K   IA   A+G+ +LH      IIHRD+K++NI L+E+   K+ DFGLA + S    +H    ++G+  ++ PE          + + DVY+FG++L EL+TG+ P
Sbjct:   89 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 281          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: MET_ATEAB (Hepatocyte growth factor receptor OS=Atelerix albiventris GN=MET PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 72/213 (33.80%), Postives = 107/213 (50.23%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALPDGKT----VAVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVPLLGYCSFGE-EKLLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 671
            +IG G FG VY   L D        AVK L++    G   +F  E   +    H N++ LLG C   E   L+V  YM +G L  ++RN T +    +++G+  +       A+G+ +L    +   +HRD+ A N +L+E F  KVADFGLAR +   E    H  T       ++  E  Q+ + TT+ DV+SFGV+L EL+T   P  P+
Sbjct: 1084 VIGRGHFGCVYHGTLLDNDDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYLA---SKKFVHRDLAARNCMLDENFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 1287          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: LYN_MOUSE (Tyrosine-protein kinase Lyn OS=Mus musculus GN=Lyn PE=1 SV=4)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 64/197 (32.49%), Postives = 98/197 (49.75%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            +G G FG V+     +   VAVK L    T   + F  E   +  ++H  LV L    +  E   ++ E+M  GSL  +L++  G   +L   K    +   A G+A++      + IHRD++A+N+L++E    K+ADFGLAR+I   E            +  PE    G  T + DV+SFG++L E+VT GK P
Sbjct:  253 LGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIP 443          
The following BLAST results are available for this feature:
BLAST of FC929548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HCK_MACFA1.265e-1733.33Tyrosine-protein kinase HCK OS=Macaca fascicularis... [more]
EPHA3_HUMAN1.265e-1732.26Ephrin type-A receptor 3 OS=Homo sapiens GN=EPHA3 ... [more]
CDC7_SCHPO1.265e-1732.66Cell division control protein 7 OS=Schizosaccharom... [more]
BTKL_DROME1.265e-1732.16Tyrosine-protein kinase Btk29A OS=Drosophila melan... [more]
ABL_DROME1.265e-1733.00Tyrosine-protein kinase Abl OS=Drosophila melanoga... [more]
TNI3K_MOUSE1.652e-1733.50Serine/threonine-protein kinase TNNI3K OS=Mus musc... [more]
RMIL_AVII11.652e-1732.00Serine/threonine-protein kinase-transforming prote... [more]
RMIL_AVEVR1.652e-1732.00Serine/threonine-protein kinase-transforming prote... [more]
MET_ATEAB1.652e-1733.80Hepatocyte growth factor receptor OS=Atelerix albi... [more]
LYN_MOUSE1.652e-1732.49Tyrosine-protein kinase Lyn OS=Mus musculus GN=Lyn... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2DA09RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2DA09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929548 ID=FC929548; Name=FC929548; organism=Citrus clementina; type=EST; length=846bp
AGCAACCTCTCATGAGACTAACTTTGGTTCATATTCTTGAAGCCACAAAC
AACTTCTGCAAGACAAATATTATTGGAGATGGTGGCTTTGGAACTGTATA
CAAAGCCGCTTTGCCTGATGGGAAAACAGTTGCTGTTAAGAAGTTAAGCC
AGGCTAAAACACAGGGGCACCGTGAATTCACTGCTGAAATGGAAACTCTG
GGCAAGGTGAAGCACCAGAATCTTGTGCCGCTGCTTGGTTACTGCTCATT
TGGTGAGGAGAAGCTTCTTGTTTATGAATACATGGTAAATGGAAGCTTGG
ATCTGTGGTTAAGAAATCGGACGGGTTCTCTTGAAGTTCTTGGCTGGGAT
AAACGCTACAAAATTGCATGTGGCGCTGCTCGTGGGCTAGCTTTTCTTCA
TCACGGCTTCACCCCACATATCATTCATCGCGATATCAAAGCAAGCAACA
TCTTACTCAATGAAGAGTTTGAAGCCAAAGTTGCAGACTTTGGGCTTGCT
AGACTGATCAGTGCATGCGAGACACATGTTAGCACTGATATTGCAGGCAC
ATTTGGTTACATTCCCCCCGAGTATGGGCAGAGTGGGAGATCTACCACAA
GGGGTGATGTATACAGCTTTGGTGTAATCTTGCTGGAATTGGTGACTGGA
AAAGAGCCTACGGGGCCCGAATTCAAAGATATAGAAGGTGGGAACTTGGT
CGGTTGGGTGTTTCAGAAGATGAAGAAGGGACAGGCTGCTGATGTTCTAG
ATCCTACAGTCCTTACTGCAGATTCAAAGCCCATGATGCTTAAAATGCTC
CGGATTGCTGGTGATTGCCTCTCTGATAACCCTGCTATGAGGCCTA
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