FC929548

Overview
NameFC929548
Unique NameFC929548
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length846
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15034 contig Ccv1_Contig15034:1..846. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: FGR_FSVGR (Tyrosine-protein kinase transforming protein Fgr OS=Feline sarcoma virus (strain Gardner-Rasheed) GN=V-FGR PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.158e-17
Identity = 67/198 (33.84%), Postives = 102/198 (51.52%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            +G G FG V+         VAVK L    T   +    E + +  ++H  LV L  Y    EE + +V E+M +GSL  +L+++ G  + L   +   +A   A G+A++        IHRD++A+NIL+ E    K+ADFGLARLI   E +          +  PE    GR T + DV+SFG++L EL++ G+ P
Sbjct:  292 LGTGCFGDVWLGMWNGSTKVAVKTLKPG-TMSPKASLEEAQIMKLLRHDKLVQL--YAVVPEEPIYIVTEFMCHGSLLEFLKDQEG--QDLTLPQLVDMAAQVAEGMAYMER---MDYIHRDLRAANILVGERLVCKIADFGLARLIEDNEYNPRQGAKFPIKWTAPEAALFGRFTIKSDVWSFGILLTELISKGRVP 481          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: EPA4A_DANRE (Ephrin type-A receptor 4a (Fragment) OS=Danio rerio GN=epha4a PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.158e-17
Identity = 69/213 (32.39%), Postives = 110/213 (51.64%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALP-DGKT---VAVKKLSQAKT-QGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI--SACETHVSTDIAGTF----GYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            IG G FG V    L   GK    VA+K L    T +  R+F +E   +G+  H N++ L G  +  +  +++ EYM NGSLD +LR   G   V+   +   I  G A G+ +L        +HRD+ A NIL+N     KV+DFG++R++       + + +I GT+    G IP     PE     + T+  DV+S+G+++ E+++ G+ P
Sbjct:    1 IGIGEFGEVCSGRLKMPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIRLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGILRGIASGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEEDPDAAYTTREITGTYQSQGGKIPIRWTAPEAITYRKFTSASDVWSYGIVMWEVMSYGERP 207          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: M3K2_ARATH (Mitogen-activated protein kinase kinase kinase 2 OS=Arabidopsis thaliana GN=ANP2 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.818e-17
Identity = 77/272 (28.31%), Postives = 129/272 (47.43%), Query Frame = 3
Query:   60 KTNIIGDGGFGTVYKAA-LPDGKTVAVKKL-------SQAKTQGH-REFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET-HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRP 845
            K  +IG G FGTVY    L  G+ +AVK++       S+ KTQ H +E   E++ L  + H N+V  LG     E   ++ E++  GS+   L       E +      ++  G    L +LH+     I+HRDIK +NIL++ +   K+ADFG ++ ++   T   +  + GT  ++ PE       +   D++S G  ++E+VTGK P   ++K+I     +G           +    P  +++D+   +LK       CL   P +RP
Sbjct:   70 KGQLIGRGAFGTVYMGMNLDSGELLAVKQVLITSNCASKEKTQAHIQELEEEVKLLKNLSHPNIVRYLGTVREDETLNILLEFVPGGSISSLLEKFGAFPESVVRTYTNQLLLG----LEYLHNHA---IMHRDIKGANILVDNQGCIKLADFGASKQVAELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMVTGKAPWSQQYKEIAAIFHIGTT--------KSHPPIPDNISSDANDFLLK-------CLQQEPNLRP 319          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: FRK_MOUSE (Tyrosine-protein kinase FRK OS=Mus musculus GN=Frk PE=1 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 2.818e-17
Identity = 65/228 (28.51%), Postives = 115/228 (50.44%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV---STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 743
            +G G FG V++    +   VAVK L       + +F  E + +  ++H  L+ L   C+  +   ++ E M +GSL  +L+N  GS   L   ++  +A   A G+A+L    + + IHRD+ A N+L+ E    KVADFGLAR+       +     +I     +  PE  ++ + + + DV+SFG++L E++T GK P    +  + G  ++  + Q  +  Q ++
Sbjct:  247 LGSGQFGEVWEGLWNNTTPVAVKTLKPGSMDPN-DFLREAQIMKSLRHPKLIQLYAVCTLEDPIYIITELMRHGSLQEYLQNDGGSKIHL--IQQVDMAAQVASGMAYLE---SQNYIHRDLAARNVLVGEHNIYKVADFGLARVFKVDNEDIYESKHEIKLPVKWTAPEAIRTNKFSIKSDVWSFGILLYEIITYGKMP----YSGMTGAQVIQMLSQNYRLPQPSN 464          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: EPHB3_XENLA (Ephrin type-B receptor 3 OS=Xenopus laevis GN=ephb3 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.818e-17
Identity = 65/208 (31.25%), Postives = 105/208 (50.48%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALPDG----KTVAVKKLSQAKT-QGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            +IG G FG V +  L       + VA+K L    T Q  R+F  E   +G+  H N++ L G  +     +++ E+M NG+LD +LR   G   V+   +   I  G A G+ +L      + +HRD+ A NIL+N     KV+DFGL+R +    +   T  +   G IP     PE     + T+  DV+S+G+++ E+++ G+ P
Sbjct:  614 VIGAGEFGEVCRGKLKQAGRREQFVAIKTLKAGYTEQQRRDFLGEASIMGQFDHPNIIRLEGVVTRSRPVMILTEFMENGALDSFLRMNDGQFTVI---QLVGILRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLENSRSD-PTYTSALGGKIPIRWTAPEAISYRKFTSASDVWSYGIVMWEVMSYGERP 814          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: EPHB2_COTJA (Ephrin type-B receptor 2 OS=Coturnix coturnix japonica GN=EPHB2 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.818e-17
Identity = 67/208 (32.21%), Postives = 107/208 (51.44%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALP-DGKT---VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            +IG G FG V    L   GK    VA+K L    T+  R +F +E   +G+  H N++ L G  +     +++ E+M NGSLD +LR   G   V+   +   +  G A G+ +L      + +HRD+ A N L+N     KV+DFGL+R +   +T   T  +   G IP     PE  Q  + T+  DV+S+G+++ E+++ G+ P
Sbjct:  627 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSSPVMIITEFMENGSLDSFLRQNDGQFTVI---QLVGMLRGIAAGMKYL---ADMNYVHRDLAARNTLVNSNLVCKVSDFGLSRFLED-DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 827          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: MET_ECHTE (Hepatocyte growth factor receptor OS=Echinops telfairi GN=MET PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17
Identity = 72/213 (33.80%), Postives = 107/213 (50.23%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALPDGKT----VAVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVPLLGYCSFGE-EKLLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 671
            +IG G FG VY   L D        AVK L++    G   +F  E   +    H N++ LLG C   E   L+V  YM +G L  ++RN T S    +++G+  +       A+G+ +L    +   +HRD+ A N +L+ +F  KVADFGLAR +   E    H  T       ++  E  Q+ + TT+ DV+SFGV+L EL+T   P  P+
Sbjct: 1082 VIGRGHFGCVYHGTLLDNDDRKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHSPTVKDLIGFGLQ------VAKGMKYLA---SKKFVHRDLAARNCMLDGKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 1285          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: IPL1_YARLI (Spindle assembly checkpoint kinase OS=Yarrowia lipolytica GN=IPL1 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17
Identity = 76/251 (30.28%), Postives = 126/251 (50.20%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKT--VAVKKLSQAK--TQGH--REFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRI 806
            +G G FG VY   + D KT  V+  K  + K   +G+  ++F  E+E    ++H N++ L G+    +   L+ EY+V+G L   LRN+    E       Y++    +  L +LH     +IIHRDIK  NILL+     K++DFG +  + A     ST + GT  Y+PPE  QS       DV+S G+++ E + G     P F++  G       ++++ K    D+  P  ++AD+  ++ +ML +
Sbjct:  105 LGKGKFGKVY--LVKDKKTGFVSALKCMEKKELVEGNVEKQFRREVEIQSNLRHTNVLRLFGHFHDKDRVYLILEYVVHGELYKLLRNQKRFTESTASSYIYQM----SEALLYLH---GKNIIHRDIKPENILLHFNDTIKISDFGWS--VHAPSNRRST-LCGTMDYLPPEIVQSRPYDKNVDVWSLGILMYEFLCG----APPFEEPGGAQA---TYRRIVK---LDLRIPPYVSADAADLIKRMLTL 333          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: EPHA5_RAT (Ephrin type-A receptor 5 OS=Rattus norvegicus GN=Epha5 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17
Identity = 67/206 (32.52%), Postives = 105/206 (50.97%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALP-DGKT---VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHH-GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG--TFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            +IG G FG V    L   GK    VA K L    T+  R +F +E   +G+  H N++ L G  +  +  ++V EYM NGSLD +L+   G   V+   +   +  G A G+ +L   G+    +HRD+ A NIL+N     KV+DFGL+R++        T   G     +  PE     + T+  DV+S+G+++ E+V+ G+ P
Sbjct:  682 VIGAGEFGEVCSGRLKLPGKRELPVATKTLKVGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVI---QLVGMLRGIAAGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 880          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: EPHA5_CHICK (Ephrin type-A receptor 5 OS=Gallus gallus GN=EPHA5 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17
Identity = 66/206 (32.04%), Postives = 105/206 (50.97%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALP-DGKT---VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHH-GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG--TFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            +IG G FG V    L   GK    VA+K L    T+  R +F  E   +G+  H N++ L G  +  +  ++V EYM NGSLD +L+   G   V+   +   +  G A G+ +L   G+    +HRD+ A NIL+N     KV+DFGL+R++        T   G     +  PE     + T+  DV+S+G+++ E+++ G+ P
Sbjct:  656 VIGAGEFGEVCSGRLKLQGKREFPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVI---QLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVMSYGERP 854          
The following BLAST results are available for this feature:
BLAST of FC929548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FGR_FSVGR2.158e-1733.84Tyrosine-protein kinase transforming protein Fgr O... [more]
EPA4A_DANRE2.158e-1732.39Ephrin type-A receptor 4a (Fragment) OS=Danio reri... [more]
M3K2_ARATH2.818e-1728.31Mitogen-activated protein kinase kinase kinase 2 O... [more]
FRK_MOUSE2.818e-1728.51Tyrosine-protein kinase FRK OS=Mus musculus GN=Frk... [more]
EPHB3_XENLA2.818e-1731.25Ephrin type-B receptor 3 OS=Xenopus laevis GN=ephb... [more]
EPHB2_COTJA2.818e-1732.21Ephrin type-B receptor 2 OS=Coturnix coturnix japo... [more]
MET_ECHTE3.681e-1733.80Hepatocyte growth factor receptor OS=Echinops telf... [more]
IPL1_YARLI3.681e-1730.28Spindle assembly checkpoint kinase OS=Yarrowia lip... [more]
EPHA5_RAT3.681e-1732.52Ephrin type-A receptor 5 OS=Rattus norvegicus GN=E... [more]
EPHA5_CHICK3.681e-1732.04Ephrin type-A receptor 5 OS=Gallus gallus GN=EPHA5... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2DA09RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2DA09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929548 ID=FC929548; Name=FC929548; organism=Citrus clementina; type=EST; length=846bp
AGCAACCTCTCATGAGACTAACTTTGGTTCATATTCTTGAAGCCACAAAC
AACTTCTGCAAGACAAATATTATTGGAGATGGTGGCTTTGGAACTGTATA
CAAAGCCGCTTTGCCTGATGGGAAAACAGTTGCTGTTAAGAAGTTAAGCC
AGGCTAAAACACAGGGGCACCGTGAATTCACTGCTGAAATGGAAACTCTG
GGCAAGGTGAAGCACCAGAATCTTGTGCCGCTGCTTGGTTACTGCTCATT
TGGTGAGGAGAAGCTTCTTGTTTATGAATACATGGTAAATGGAAGCTTGG
ATCTGTGGTTAAGAAATCGGACGGGTTCTCTTGAAGTTCTTGGCTGGGAT
AAACGCTACAAAATTGCATGTGGCGCTGCTCGTGGGCTAGCTTTTCTTCA
TCACGGCTTCACCCCACATATCATTCATCGCGATATCAAAGCAAGCAACA
TCTTACTCAATGAAGAGTTTGAAGCCAAAGTTGCAGACTTTGGGCTTGCT
AGACTGATCAGTGCATGCGAGACACATGTTAGCACTGATATTGCAGGCAC
ATTTGGTTACATTCCCCCCGAGTATGGGCAGAGTGGGAGATCTACCACAA
GGGGTGATGTATACAGCTTTGGTGTAATCTTGCTGGAATTGGTGACTGGA
AAAGAGCCTACGGGGCCCGAATTCAAAGATATAGAAGGTGGGAACTTGGT
CGGTTGGGTGTTTCAGAAGATGAAGAAGGGACAGGCTGCTGATGTTCTAG
ATCCTACAGTCCTTACTGCAGATTCAAAGCCCATGATGCTTAAAATGCTC
CGGATTGCTGGTGATTGCCTCTCTGATAACCCTGCTATGAGGCCTA
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