FC929548

Overview
NameFC929548
Unique NameFC929548
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length846
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15034 contig Ccv1_Contig15034:1..846. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: Y0146_DICDI (Probable serine/threonine-protein kinase DDB_G0270146 OS=Dictyostelium discoideum GN=DDB_G0270146 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.807e-17
Identity = 66/199 (33.17%), Postives = 99/199 (49.75%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 659
            IG G F TV+K      G  VA+K+  ++K   + H   + E + L ++ H+N+V +LG         +  EYM NGSL   L N     E L  +    +     +GL +LH      +IHRDIKA+NIL+N+  EAK++DFG A  I   E+     + GT  ++ PE  +        D++S G  ++EL T   P
Sbjct:   83 IGKGAFATVFKGLNTLSGDFVAIKRFEKSKISNEQHSSVSTEFDILQRLNHENIVRILGREENENYIYIFLEYMENGSLSTILNNFGTFPESLICNYVENVL----KGLVYLHQ---EGVIHRDIKAANILINKAGEAKLSDFGTAGEIIK-ESDKRYSVVGTPYWMAPEVIEISGHCQVSDIWSLGCTIIELFTSYPP 273          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: TIE2_HUMAN (Angiopoietin-1 receptor OS=Homo sapiens GN=TEK PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.807e-17
Identity = 72/216 (33.33%), Postives = 105/216 (48.61%), Query Frame = 3
Query:   66 NIIGDGGFGTVYKAALP-DGKTV--AVKKLSQ-AKTQGHREFTAEMETLGKVKHQ-NLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNR------------TGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP-----EYGQSGRSTTRGDVYSFGVILLELVT 647
            ++IG+G FG V KA +  DG  +  A+K++ + A    HR+F  E+E L K+ H  N++ LLG C       L  EY  +G+L  +LR                +   L   +    A   ARG+ +L        IHRD+ A NIL+ E + AK+ADFGL+R     E +V      T G +P      E       TT  DV+S+GV+L E+V+
Sbjct:  828 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKK----TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 1033          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: TIE2_BOVIN (Angiopoietin-1 receptor OS=Bos taurus GN=TEK PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.807e-17
Identity = 72/216 (33.33%), Postives = 105/216 (48.61%), Query Frame = 3
Query:   66 NIIGDGGFGTVYKAALP-DGKTV--AVKKLSQ-AKTQGHREFTAEMETLGKVKHQ-NLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNR------------TGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP-----EYGQSGRSTTRGDVYSFGVILLELVT 647
            ++IG+G FG V KA +  DG  +  A+K++ + A    HR+F  E+E L K+ H  N++ LLG C       L  EY  +G+L  +LR                +   L   +    A   ARG+ +L        IHRD+ A NIL+ E + AK+ADFGL+R     E +V      T G +P      E       TT  DV+S+GV+L E+V+
Sbjct:  829 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKK----TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 1034          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: SRMS_HUMAN (Tyrosine-protein kinase Srms OS=Homo sapiens GN=SRMS PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.807e-17
Identity = 60/192 (31.25%), Postives = 95/192 (49.48%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT 647
            +G+G FG V++        VA+K +  A  +   +   E++TL  ++H+ L+ L   CS GE   +V E M  G+L  +L    G    L        AC  A G+++L       ++HRD+ A N+L+++    KVADFGLARL+       S+       +  PE       + + DV+SFGV+L E+ T
Sbjct:  236 LGEGYFGEVWEGLWLGSLPVAIKVIKSANMK-LTDLAKEIQTLKGLRHERLIRLHAVCSGGEPVYIVTELMRKGNLQAFLGTPEG--RALRLPPLLGFACQVAEGMSYLEE---QRVVHRDLAARNVLVDDGLACKVADFGLARLLKDDIYSPSSSSKIPVKWTAPEAANYRVFSQKSDVWSFGVLLHEVFT 421          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: EPHA5_HUMAN (Ephrin type-A receptor 5 OS=Homo sapiens GN=EPHA5 PE=1 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 4.807e-17
Identity = 66/206 (32.04%), Postives = 105/206 (50.97%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALP-DGKT---VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHH-GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG--TFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            +IG G FG V    L   GK    VA+K L    T+  R +F  E   +G+  H N++ L G  +  +  ++V EYM NGSLD +L+   G   V+   +   +  G + G+ +L   G+    +HRD+ A NIL+N     KV+DFGL+R++        T   G     +  PE     + T+  DV+S+G+++ E+V+ G+ P
Sbjct:  680 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVI---QLVGMLRGISAGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 878          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: EPHA3_CHICK (Ephrin type-A receptor 3 OS=Gallus gallus GN=EPHA3 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.807e-17
Identity = 66/213 (30.99%), Postives = 107/213 (50.23%), Query Frame = 3
Query:   48 NNFCKTNIIGDGGFGTVY--KAALPDGK--TVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHH-GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG--TFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            +N     ++G G FG V   +  LP  K  +VA+K L    T+  R +F  E   +G+  H N++ L G  +  +  ++V EYM NGSLD +LR       V+   +   +  G A G+ +L   G+    +HRD+ A NIL+N     KV+DFGL+R++        T   G     +  PE     + T+  D +S+G++L E+++ G+ P
Sbjct:  619 SNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKAGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDAWSYGIVLWEVMSYGERP 824          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: DST2_DICDI (Serine/threonine-protein kinase dst2 OS=Dictyostelium discoideum GN=dst2 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.807e-17
Identity = 60/202 (29.70%), Postives = 101/202 (50.00%), Query Frame = 3
Query:   72 IGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAA-RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRS----TTRGDVYSFGVILLELVTGKEP 659
            I +G FGTVYK   LP G  +AVK ++  + +   +   E++ L +  H N+V   G    G+E  +  E    GS+    +     L     + +    C    +GL +LHH    ++IHRD+K +NILL E  + K+ADFG++ L+   ++       GT  ++ PE  ++  +     T+ D++S G+ L+EL   + P
Sbjct:   26 IAEGSFGTVYKGKHLPTGNIMAVKIIALDEDETFEDLVVEIDILNRCNHNNIVKYYGSWVKGDELFIAMECCGGGSITEIYQELNIPLN----ESQIAYVCRETLKGLEYLHH---TNVIHRDLKGANILLTESGDVKLADFGVSGLLD--KSSKRNTFIGTPYWMAPEVIENRSNPVPYDTKADIWSLGITLIELAEAEPP 218          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: DLK1_CAEBR (Mitogen-activated protein kinase kinase kinase dlk-1 OS=Caenorhabditis briggsae GN=dlk-1 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.807e-17
Identity = 62/196 (31.63%), Postives = 100/196 (51.02%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 659
            +G G  G V+     + +TVAVKK++Q K         E++ L  ++H+N++  LG CS      +V EY   G L   LR +      +  D   +IA     G+ +LH      +IHRD+K+ NIL++ E   K+ DFG + L    ++ + +   GT  ++ PE  +      + DVYSFGV+L E++T + P
Sbjct:   68 LGSGSQGAVFHGQY-ENRTVAVKKVNQLKE-------TEIKHLRHLRHKNIIEFLGVCSKSPCYCIVMEYCPKGQLCTVLRQKNLITRQMFSDWVKEIA----DGMHYLHQN---KVIHRDLKSPNILISAEDSIKICDFGTSHLQKKNDSTMMS-FCGTVSWMAPEMIKKEPCNEKVDVYSFGVVLWEMLTRETP 247          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: Y9847_DICDI (Probable serine/threonine-protein kinase DDB_G0267686 OS=Dictyostelium discoideum GN=DDB_G0267686 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.278e-17
Identity = 69/213 (32.39%), Postives = 112/213 (52.58%), Query Frame = 3
Query:   66 NIIGDGGFGTVYKAALPDGKTVAVKKL-SQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELV-----TGKEPTGPEFKDIE 686
            N +G+G    VY+A   + + VAVK L S+ ++Q   +F  E+E +  ++  ++V   G      +  ++ EY  N +L   +  +        WD  +K A    RG+  LH  + P I+HRD+K+ N+L+++ +  KVADFGL+R  +A ++  +    GTF Y  PE    G  TT+GD++S G+IL EL      +  E    EFK I+
Sbjct: 1953 NKLGEGTSAKVYRATWRN-QEVAVKVLRSEPESQKLLDFLKELEIMSSLRSPHVVYFYGMV-LDPKICMIMEYCSNQTLYHLMHLQMN----FTWDWVFKFAIEMVRGVNCLH-SWKPVIVHRDLKSLNLLVSDNWTIKVADFGLSRFATA-KSASNRTTRGTFAYCAPEVFY-GIHTTKGDIFSIGIILWELAVRCIKSKYEKPFSEFKHIQ 2156          
BLAST of FC929548 vs. ExPASy Swiss-Prot
Match: Y8901_DICDI (Probable serine/threonine-protein kinase DDB_G0278901 OS=Dictyostelium discoideum GN=DDB_G0278901 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.278e-17
Identity = 64/214 (29.91%), Postives = 104/214 (48.60%), Query Frame = 3
Query:   39 EATNNFCKTNIIGDGGFGTVYKAALPDG------KTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD-IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 659
            E+  ++   +IIG GGFG VYK            K + + K  + +++      AE+  L  + H N+V    +        +V E++ NGSL+  ++      E L      ++      GL +LH      +IHRDIKA+N+L++ +   K+ADFG+A  +S   +    D  AGT  ++ PE  Q    +T  DV+S G  ++EL+TG  P
Sbjct:   17 ESCGDYLLIDIIGKGGFGVVYKGLHKTKGYFSAIKKIKIMKKKKLQSESQISLMAEINLLKVLSHHNIVRYYEHIPSSSHSYIVMEFIENGSLEKIIKRHGLLPESLVTVYIAQVL----NGLEYLHR---QGVIHRDIKAANLLISTDGSIKLADFGVATKVSDLSSDNPDDTFAGTPYWMAPEVIQMQGISTACDVWSLGCTIIELLTGTPP 223          
The following BLAST results are available for this feature:
BLAST of FC929548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y0146_DICDI4.807e-1733.17Probable serine/threonine-protein kinase DDB_G0270... [more]
TIE2_HUMAN4.807e-1733.33Angiopoietin-1 receptor OS=Homo sapiens GN=TEK PE=... [more]
TIE2_BOVIN4.807e-1733.33Angiopoietin-1 receptor OS=Bos taurus GN=TEK PE=2 ... [more]
SRMS_HUMAN4.807e-1731.25Tyrosine-protein kinase Srms OS=Homo sapiens GN=SR... [more]
EPHA5_HUMAN4.807e-1732.04Ephrin type-A receptor 5 OS=Homo sapiens GN=EPHA5 ... [more]
EPHA3_CHICK4.807e-1730.99Ephrin type-A receptor 3 OS=Gallus gallus GN=EPHA3... [more]
DST2_DICDI4.807e-1729.70Serine/threonine-protein kinase dst2 OS=Dictyostel... [more]
DLK1_CAEBR4.807e-1731.63Mitogen-activated protein kinase kinase kinase dlk... [more]
Y9847_DICDI6.278e-1732.39Probable serine/threonine-protein kinase DDB_G0267... [more]
Y8901_DICDI6.278e-1729.91Probable serine/threonine-protein kinase DDB_G0278... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2DA09RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2DA09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929548 ID=FC929548; Name=FC929548; organism=Citrus clementina; type=EST; length=846bp
AGCAACCTCTCATGAGACTAACTTTGGTTCATATTCTTGAAGCCACAAAC
AACTTCTGCAAGACAAATATTATTGGAGATGGTGGCTTTGGAACTGTATA
CAAAGCCGCTTTGCCTGATGGGAAAACAGTTGCTGTTAAGAAGTTAAGCC
AGGCTAAAACACAGGGGCACCGTGAATTCACTGCTGAAATGGAAACTCTG
GGCAAGGTGAAGCACCAGAATCTTGTGCCGCTGCTTGGTTACTGCTCATT
TGGTGAGGAGAAGCTTCTTGTTTATGAATACATGGTAAATGGAAGCTTGG
ATCTGTGGTTAAGAAATCGGACGGGTTCTCTTGAAGTTCTTGGCTGGGAT
AAACGCTACAAAATTGCATGTGGCGCTGCTCGTGGGCTAGCTTTTCTTCA
TCACGGCTTCACCCCACATATCATTCATCGCGATATCAAAGCAAGCAACA
TCTTACTCAATGAAGAGTTTGAAGCCAAAGTTGCAGACTTTGGGCTTGCT
AGACTGATCAGTGCATGCGAGACACATGTTAGCACTGATATTGCAGGCAC
ATTTGGTTACATTCCCCCCGAGTATGGGCAGAGTGGGAGATCTACCACAA
GGGGTGATGTATACAGCTTTGGTGTAATCTTGCTGGAATTGGTGACTGGA
AAAGAGCCTACGGGGCCCGAATTCAAAGATATAGAAGGTGGGAACTTGGT
CGGTTGGGTGTTTCAGAAGATGAAGAAGGGACAGGCTGCTGATGTTCTAG
ATCCTACAGTCCTTACTGCAGATTCAAAGCCCATGATGCTTAAAATGCTC
CGGATTGCTGGTGATTGCCTCTCTGATAACCCTGCTATGAGGCCTA
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