FC929596

Overview
NameFC929596
Unique NameFC929596
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length798
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929596 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.487e-65
Identity = 128/258 (49.61%), Postives = 168/258 (65.12%), Query Frame = 3
Query:   18 LTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMML 791
            LT+  +L+AT+NF + NIIG GGFG VYKA L +G  +AVKKL+       +EF AE+E L + KH+NLV L GYC     ++L+Y +M NGSLD WL         L W KR  I  GA+ GLA++H    PHI+HRDIK+SNILL+  F+A VADFGL+RLI    THV+T++ GT GYIPPEYGQ+  +T RGDVYSFGV++LEL+TGK P    F+      LV WV    + G+  +V D  +  + ++  ML
Sbjct:  791 LTIFELLKATDNFSQANIIGCGGFGLVYKATLDNGTKLAVKKLTGDYGMMEKEFKAEVEVLSRAKHENLVALQGYCVHDSARILIYSFMENGSLDYWLHENPEGPAQLDWPKRLNIMRGASSGLAYMHQICEPHIVHRDIKSSNILLDGNFKAYVADFGLSRLILPYRTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGKRPM-EVFRPKMSRELVAWVHTMKRDGKPEEVFDTLLRESGNEEAML 1047          
BLAST of FC929596 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 234.572 bits (597), Expect = 4.952e-61
Identity = 108/248 (43.55%), Postives = 167/248 (67.34%), Query Frame = 3
Query:   21 TLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEG-GNLVGWVFQKMKKGQAADVLDPTV 761
            TL  +  ATN  C+ N+IG+GG+G VY+  L DG  VAVK L   + Q  +EF  E+E +G+V+H+NLV LLGYC  G  ++LVY+++ NG+L+ W+    G +  L WD R  I  G A+GLA+LH G  P ++HRDIK+SNILL+ ++ AKV+DFGLA+L+ +  ++V+T + GTFGY+ PEY  +G    + D+YSFG++++E++TG+ P   ++   +G  NLV W+   +   ++ +V+DP +
Sbjct:  143 TLRELEAATNGLCEENVIGEGGYGIVYRGILTDGTKVAVKNLLNNRGQAEKEFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPV--DYSRPQGETNLVDWLKSMVGNRRSEEVVDPKI 388          
BLAST of FC929596 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 7.150e-60
Identity = 114/255 (44.71%), Postives = 165/255 (64.71%), Query Frame = 3
Query:   21 TLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPT--GPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSK 779
            TL  +  ATN F   N++G+GG+G VY+  L +G  VAVKKL     Q  +EF  E+E +G V+H+NLV LLGYC  G  ++LVYEY+ +G+L+ WL         L W+ R KI  G A+ LA+LH    P ++HRDIKASNIL+++EF AK++DFGLA+L+ + E+H++T + GTFGY+ PEY  +G    + D+YSFGV+LLE +TG++P   G    ++   NLV W+   +   +A +V+DP +    SK
Sbjct:  172 TLRDLELATNRFAPVNVLGEGGYGVVYRGKLVNGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMRQHGNLTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEV---NLVEWLKMMVGTRRAEEVVDPRLEPRPSK 423          
BLAST of FC929596 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.220e-59
Identity = 121/250 (48.40%), Postives = 168/250 (67.20%), Query Frame = 3
Query:    6 PLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 755
            P     ++  LE  N   + +IIG GGFGTVYK A+ DGK  A+K++ +      R F  E+E LG +KH+ LV L GYC+    KLL+Y+Y+  GSLD  L  R    E L WD R  I  GAA+GL++LHH  +P IIHRDIK+SNILL+   EA+V+DFGLA+L+   E+H++T +AGTFGY+ PEY QSGR+T + DVYSFGV++LE+++GK PT   F + +G N+VGW+   + + +  D++DP
Sbjct:  293 PYSSKDIIKKLEMLN---EEHIIGCGGFGTVYKLAMDDGKVFALKRILKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALHERG---EQLDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIE-KGLNVVGWLKFLISEKRPRDIVDP 535          
BLAST of FC929596 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.549e-59
Identity = 122/247 (49.39%), Postives = 162/247 (65.59%), Query Frame = 3
Query:   21 TLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETL-----GKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGN--LVGWVFQKMKKGQAA 740
            T   IL+AT+NF +  ++G GG+GTVY+  LPDG+ VAVKKL +  T+  +EF AEME L     G   H NLV L G+C  G EK+LV+EYM  GSL+  + ++T     L W KR  IA   ARGL FLHH   P I+HRD+KASN+LL++   A+V DFGLARL++  ++HVST IAGT GY+ PEYGQ+ ++TTRGDVYS+GV+ +EL TG+       + ++GG   LV W  + M     A
Sbjct:  803 TYADILKATSNFSEERVVGRGGYGTVYRGVLPDGREVAVKKLQREGTEAEKEFRAEMEVLSANAFGDWAHPNLVRLYGWCLDGSEKILVHEYMGGGSLEELITDKTK----LQWKKRIDIATDVARGLVFLHHECYPSIVHRDVKASNVLLDKHGNARVTDFGLARLLNVGDSHVSTVIAGTIGYVAPEYGQTWQATTRGDVYSYGVLTMELATGR-------RAVDGGEECLVEWARRVMTGNMTA 1038          
BLAST of FC929596 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.032e-58
Identity = 116/240 (48.33%), Postives = 165/240 (68.75%), Query Frame = 3
Query:   33 ILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 752
            I++   +  + +IIG GGFGTVYK ++ DG   A+K++ +      R F  E+E LG +KH+ LV L GYC+    KLL+Y+Y+  GSLD  L  R    E L WD R  I  GAA+GLA+LHH  +P IIHRDIK+SNILL+   EA+V+DFGLA+L+   E+H++T +AGTFGY+ PEY QSGR+T + DVYSFGV++LE+++GK PT   F + +G N+VGW+   + + +A +++D
Sbjct:  297 IIKKLESLNEEHIIGCGGFGTVYKLSMDDGNVFALKRIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALHKRG---EQLDWDSRVNIIIGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFIE-KGFNIVGWLNFLISENRAKEIVD 532          
BLAST of FC929596 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.153e-56
Identity = 112/248 (45.16%), Postives = 157/248 (63.31%), Query Frame = 3
Query:    9 LMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 752
            L R +   I  AT+NF   NI+G GGFG VYK  LP+G  VAVK+L      G  +F  E+E +G   H+NL+ L G+C   EE++LVY YM NGS+   LR+  G    L W++R  IA GAARGL +LH    P IIHRD+KA+NILL+E FEA V DFGLA+L+   ++HV+T + GT G+I PEY  +G+S+ + DV+ FGV++LEL+TG +        +  G ++ WV     + + A+++D
Sbjct:  285 LKRFSFREIQTATSNFSPKNILGQGGFGMVYKGYLPNGTVVAVKRLKDPIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGNGQVRKGMILSWVRTLKAEKRFAEMVD 532          
BLAST of FC929596 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.153e-56
Identity = 121/259 (46.72%), Postives = 157/259 (60.62%), Query Frame = 3
Query:   21 TLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLXM 797
            TL  I  ATNNF   N IG+GGFG VYK  L DG T+AVK+LS    QG+REF  E+  +  ++H NLV L G C  G+E LLVYEY+ N SL   L         L W  R KI  G A+GLA+LH      I+HRDIKA+N+LL+    AK++DFGLA+L     TH+ST IAGT GY+ PEY   G  T + DVYSFGV+ LE+V+GK  T    K+ E   L+ W +   ++G   +++DP + T+ SK   + M
Sbjct:  658 TLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKE-EFVYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRM 915          
BLAST of FC929596 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 2.812e-56
Identity = 120/259 (46.33%), Postives = 157/259 (60.62%), Query Frame = 3
Query:   21 TLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLXM 797
            TL  I  ATNNF   N IG+GGFG VYK  L DG T+AVK+LS    QG+REF  E+  +  ++H NLV L G C  G+E LLVYEY+ N SL   L         L W  R K+  G A+GLA+LH      I+HRDIKA+N+LL+    AK++DFGLA+L     TH+ST IAGT GY+ PEY   G  T + DVYSFGV+ LE+V+GK  T    K+ E   L+ W +   ++G   +++DP + T+ SK   + M
Sbjct:  656 TLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKE-EFIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRM 913          
BLAST of FC929596 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.068e-55
Identity = 121/261 (46.36%), Postives = 168/261 (64.37%), Query Frame = 3
Query:   15 RLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDI---AGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTG----PEFKDIE---GGNLVGWVFQKMKKGQAADVLDPTVL 764
            ++ L  +++AT  F K NII  G  GT+YK  L DG  + +K+L  ++ +  +EF AEM+TLG VK++NLVPLLGYC   +E+LL+YEYM NG L D        S + L W  R KIA G A+GLA+LHH   P IIHR+I +  ILL  EFE K++DFGLARL++  +TH+ST +    G FGY+ PEY ++  +T +GDVYSFGV+LLELVTG++ T      E K  E    GNLV W+ +   + +  + +D ++L
Sbjct:  290 KMKLSDLMKATEEFKKDNIIATGRTGTMYKGRLEDGSLLMIKRLQDSQ-RSEKEFDAEMKTLGSVKNRNLVPLLGYCVANKERLLMYEYMANGYLYDQLHPADEESFKPLDWPSRLKIAIGTAKGLAWLHHSCNPRIIHRNISSKCILLTAEFEPKISDFGLARLMNPIDTHLSTFVNGEFGDFGYVAPEYSRTMVATPKGDVYSFGVVLLELVTGQKATSVTKVSEEKAEEENFKGNLVEWITKLSSESKLQEAIDRSLL 549          
The following BLAST results are available for this feature:
BLAST of FC929596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PSYR1_ARATH1.487e-6549.61Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
Y1154_ARATH4.952e-6143.55Probable serine/threonine-protein kinase At1g01540... [more]
Y2296_ARATH7.150e-6044.71Probable receptor-like protein kinase At2g42960 OS... [more]
FEI1_ARATH1.220e-5948.40LRR receptor-like serine/threonine-protein kinase ... [more]
Y1743_ARATH3.549e-5949.39Probable LRR receptor-like serine/threonine-protei... [more]
FEI2_ARATH1.032e-5848.33LRR receptor-like serine/threonine-protein kinase ... [more]
Y5457_ARATH2.153e-5645.16Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH2.153e-5646.72Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH2.812e-5646.33Probable LRR receptor-like serine/threonine-protei... [more]
Y5838_ARATH1.068e-5546.36Probably inactive leucine-rich repeat receptor-lik... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1AF05RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1AF05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929596 ID=FC929596; Name=FC929596; organism=Citrus clementina; type=EST; length=798bp
AGCAACCTCTCATGAGACTAACTTTGGTTCATATTCTTGAAGCCACAAAC
AACTTCTGCAAGACAAATATTATTGGAGATGGTGGCTTTGGAACTGTATA
CAAAGCCGCTTTGCCTGATGGGAAAACAGTTGCTGTTAAGAAGTTAAGCC
AGGCTAAAACACAGGGGCACCGTGAATTCACTGCTGAAATGGAAACTCTG
GGCAAGGTGAAGCACCAGAATCTTGTGCCGCTGCTTGGTTACTGCTCATT
TGGTGAGGAGAAGCTTCTTGTTTATGAATACATGGTAAATGGAAGCTTGG
ATCTGTGGTTAAGAAATCGGACGGGTTCTCTTGAAGTTCTTGGCTGGGAT
AAACGCTACAAAATTGCATGTGGCGCTGCTCGTGGGCTAGCTTTTCTTCA
TCACGGCTTCACCCCACATATCATTCATCGCGATATCAAAGCAAGCAACA
TCTTACTCAATGAAGAGTTTGAAGCCAAAGTTGCAGACTTTGGGCTTGCT
AGACTGATCAGTGCATGCGAGACACATGTTAGCACTGATATTGCAGGCAC
ATTTGGTTACATTCCCCCCGAGTATGGGCAGAGTGGGAGATCTACCACAA
GGGGTGATGTATACAGCTTTGGTGTAATCTTGCTGGAATTGGTGACTGGA
AAAGAGCCTACGGGGCCCGAATTCAAAGATATAGAAGGTGGGAACTTGGT
CGGTTGGGTGTTTCAGAAGATGAAGAAGGGACAGGCTGCTGATGTTCTAG
ATCCTACAGTCCTTACTGCAGATTCAAAGCCCATGATGCTTNAAATGC
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