FC929604
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929604 vs. ExPASy Swiss-Prot
Match: ECS1_ARTAN (Epi-cedrol synthase OS=Artemisia annua GN=ECS1 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.746e-12 Identity = 64/230 (27.83%), Postives = 110/230 (47.83%), Query Frame = 3 Query: 168 QTIIRRSADYGPTIWSFDYIQSLDSKYKG-ESYARQL-EKLKEQVSAMLQQDNKVVDLDPLHQLDLIDNLHRLGVSYHFEDEIKRTLDRIHNKNTNKSLYA-TALKFRILRQYGYNTPVKESFSRFMDEKGSFKLSSHSDECKGMXXXXXXXXXXXXXXSSIFRDAIRFTTAYLXEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVYESGPDMNPILL 848 + +IR +A++ IW ++ + +G E + L E++K ++ L + +L L ID + RLG++Y+FE+EI + ++ +K T+L FR++RQ+G+ + FS + D++G FK S D G+ I DA+ FT L E +AK+ N + + ++ AL PLH R+ RLEA +I Y+ + LL Sbjct: 6 EDVIRPNANFPSEIWGDQFLAYDQDEQEGVEQVIKDLKEEVKSELLTALNSPTQHTEL-----LKFIDAIERLGIAYYFEEEINQVFQHMYTAYGDKWTGGNTSLWFRLMRQHGFFVS-SDIFSTYKDKEGRFKESLEKD-VHGL-LELYEAAYMFVPGEGILDDALVFTRTCLDE-IAKNPSLSN--SAVSSQIREALTQPLHKRLPRLEALRYIPFYQQQASHSETLL 224
BLAST of FC929604 vs. ExPASy Swiss-Prot
Match: AMS1_ARTAN (Amorpha-4,11-diene synthase OS=Artemisia annua GN=AMS1 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.746e-12 Identity = 69/239 (28.87%), Postives = 114/239 (47.70%), Query Frame = 3 Query: 141 STTSIKPVDQTIIRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQQDNKVVDLDPLHQ--LDLIDNLHRLGVSYHFEDEIKRTLDRIHNK-NTNKSLYATALKFRILRQYGYNTPVKESFSRFMDEKGSFKLSSHSDECKGMXXXXXXXXXXXXXXSSIFRDAIRFTTAYLXEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVYESGPDMNPILL 848 S T KP IR A++ P+IW ++ + K + + + LK++V +L++ +D+ H L LID + RLG+ YHFE EI L I+ N + ++L FR++R+ GY + F+ + D+ G+FK S +++ +G+ I DA+ FT + L + K N L T ++ AL+ PL R+ R+EA +I Y+ N LL Sbjct: 2 SLTEEKP-----IRPIANFPPSIWGDQFL--IYEKQVEQGVEQIVNDLKKEVRQLLKE---ALDIPMKHANLLKLIDEIQRLGIPYHFEREIDHALQCIYETYGDNWNGDRSSLWFRLMRKQGYYVTC-DVFNNYKDKNGAFK-QSLANDVEGL-LELYEATSMRVPGEIILEDALGFTRSRL-SIMTKDAFSTN--PALFTEIQRALKQPLWKRLPRIEAAQYIPFYQQQDSHNKTLL 224
BLAST of FC929604 vs. ExPASy Swiss-Prot
Match: GBIS2_ARATH ((Z)-gamma-bisabolene synthase 2 OS=Arabidopsis thaliana GN=TPS13 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.965e-11 Identity = 53/203 (26.11%), Postives = 97/203 (47.78%), Query Frame = 3 Query: 255 ESYARQLEKLKEQVSAMLQQDNKVVDLDPLHQLDLIDNLHRLGVSYHFEDEIKRTLDRIHNK-----NTNKSLYATALKFRILRQYGYNTPVKESFSRFMDEKGSFKLSSHSDECKGMXXXXXXXXXXXXXXSSIFRDAIRFTTAYLXEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVYESGPDMNPILL 848 ++ R+++ +K +V +L +K D ++ LI +L LG+++HFE+EIK L+ + L ++ FR+ R YG+N P F RF + G F+ S +++ KG+ I +A+ FT+++L + + ++ L+++ L LP W M + AR +I YE D + +LL Sbjct: 37 DAITREIDIIKPEVRKLLS--SKGDDETSKRKVLLIQSLLSLGLAFHFENEIKDILEDAFRRIDDITGDENDLSTISIMFRVFRTYGHNLP-SSVFKRFTGDDGKFERSL-TEDAKGILSLYEAAHLGTTT-DYILDEALEFTSSHLKSLL----VGGMCRPHILRLIRNTLYLPQRWNMEAVIAREYISFYEQEEDHDKMLL 230
BLAST of FC929604 vs. ExPASy Swiss-Prot
Match: KSA_ARATH (Ent-copalyl diphosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=GA1 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.179e-11 Identity = 59/229 (25.76%), Postives = 100/229 (43.67%), Query Frame = 3 Query: 195 YGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQQDNKVVDLDPLHQLDLIDNLHRLGVSYHFEDEIKRTLDRIHNKNTN-----------KSLYATALKFRILRQYGYNTPVKESFSRFMDEKGSFKLSSHSDECKGMXXXXXXXXXXXXXXSSIFRDAIRFTTAYLXEWVAKHDIDKNDDEYLCTL-----VKHALELPLHWRMRRLEARWFIDVYESGPDM 833 + P+ +F ++Q+ DS LE L+ V V +D + ++D L RLG+S +FE+EIK LD +H T+ + + TA+ FR+LRQ+GY + F F E F S++ I ++A F+ YL E K + ++ D+++ + ALE+P + + R+E R++ID Y D+ Sbjct: 288 FSPSSTAFAFMQTRDSNC--------LEYLRNAVKRFNGGVPNVFPVDLFEHIWIVDRLQRLGISRYFEEEIKECLDYVHRYWTDNGICWARCSHVQDIDDTAMAFRLLRQHGYQVSA-DVFKNFEKEGEFFCFVGQSNQAVTGMFNLYRASQLAFPREEILKNAKEFSYNYLLE---KREREELIDKWIIMKDLPGEIGFALEIPWYASLPRVETRFYIDQYGGENDV 504 The following BLAST results are available for this feature:
BLAST of FC929604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929604 ID=FC929604; Name=FC929604; organism=Citrus clementina; type=EST; length=849bpback to top |