FC929605

Overview
NameFC929605
Unique NameFC929605
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length834
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929605 vs. ExPASy Swiss-Prot
Match: PPID_RHIOR (Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus oryzae GN=cyp12 PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 7.740e-52
Identity = 99/158 (62.66%), Postives = 117/158 (74.05%), Query Frame = 3
Query:  348 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGR 821
            M NP+V+FD+T+G +P GRIV ELF D+ P+TAENFRALCTGEKG GKSGKPL Y+GS FHR+I  FM Q            ESIYG KF DENFV KH  P +LSMANAGPGTNGSQFF+ T  T  LDGKHVVFG+V++G  VV+A+E + + S R
Sbjct:    1 MSNPRVYFDITIGNKPEGRIVFELFKDIVPKTAENFRALCTGEKGEGKSGKPLSYQGSLFHRIIKNFMIQGGDFTAGNGTGGESIYGEKFEDENFVLKHEKPFLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGKVLKGKAVVRALENLETVSDR 158          
BLAST of FC929605 vs. ExPASy Swiss-Prot
Match: PPID_NEUCR (41 kDa peptidyl-prolyl cis-trans isomerase OS=Neurospora crassa GN=cyp-41 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.320e-51
Identity = 100/168 (59.52%), Postives = 118/168 (70.24%), Query Frame = 3
Query:  327 SPINQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNK 830
            S  +  K    +VFFD+T+GG+ AGRIV EL+ D+ P+TAENFRALCTGEKG+GK GKPLHYKGS+FHRVI  FM Q            ESIYG+KF DENF  KH  P +LSMANAGPGTNGSQFFV T  T  LDGKHVVFG+V+ G  VV+ IE + +   +  K
Sbjct:    2 SSTDDVKQARSRVFFDITIGGKAAGRIVFELYNDIVPKTAENFRALCTGEKGVGKLGKPLHYKGSTFHRVIKQFMIQGGDFTAGNGTGGESIYGAKFEDENFQLKHDRPFLLSMANAGPGTNGSQFFVTTVPTPHLDGKHVVFGEVLSGKSVVRQIENLKTQGDKPTK 169          
BLAST of FC929605 vs. ExPASy Swiss-Prot
Match: CYP6_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizopus oryzae GN=cyp6 PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.906e-50
Identity = 95/154 (61.69%), Postives = 109/154 (70.78%), Query Frame = 3
Query:  357 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSG 818
            PKVFFD+ V GQ +GR+  +LF+D  P+TAENFRALCTGEKG G SGKPLHYK S FHR+IPGFM Q            ESIYG  F DENF  KH G G+LSMANAGP TNGSQFF+    T WLDG H VFGQ+V+G  V+  +E+ GS SG
Sbjct:    7 PKVFFDIAVNGQHSGRMTFKLFSDTVPKTAENFRALCTGEKGKGISGKPLHYKNSYFHRIIPGFMAQGGDFTMGDGRGGESIYGRTFKDENFTLKHKGKGLLSMANAGPNTNGSQFFITFVDTPWLDGNHTVFGQIVDGSKVLDLLEQHGSRSG 160          
BLAST of FC929605 vs. ExPASy Swiss-Prot
Match: PPIE_RHIOR (Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus oryzae GN=cyp10 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.490e-50
Identity = 98/169 (57.99%), Postives = 118/169 (69.82%), Query Frame = 3
Query:  324 FSPINQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNK 830
            + P ++ +    +V+ D+ +G   AGRI +EL  DV P+TAENFRALCTGE G G       YK SSFHR+IP FMCQ            +SIYG KF DENFV KHTGPG LSMANAG  TNGSQFF+CT KT WLDGKHVVFGQVV GM+VV+ +E+ GS+SG+ +K
Sbjct:  144 YIPSSEKRGKKSRVYLDIQIGNTLAGRIEIELRGDVVPKTAENFRALCTGEAGFG-------YKKSSFHRIIPQFMCQGGDFTKGNGTGGKSIYGGKFEDENFVLKHTGPGTLSMANAGSNTNGSQFFICTEKTTWLDGKHVVFGQVVSGMNVVREMERCGSASGKPSK 305          
BLAST of FC929605 vs. ExPASy Swiss-Prot
Match: PAL4A_HUMAN (Peptidylprolyl cis-trans isomerase A-like 4A OS=Homo sapiens GN=PPIAL4A PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 7.245e-50
Identity = 96/161 (59.63%), Postives = 116/161 (72.05%), Query Frame = 3
Query:  348 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNK 830
            M N  +FFD+TV G+P GRI ++ FAD  P+TAENFRAL TGEKG         YKGS FHR+IPGFMCQ            +SIYG KF DEN ++KHTG GILSMANAGP TNGSQFF+CTAKTEWLDGKHV FG+V E +++V+A+E  G  + +T+K
Sbjct:    1 MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGF-------RYKGSCFHRIIPGFMCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSK 154          
BLAST of FC929605 vs. ExPASy Swiss-Prot
Match: PPIA_ECHGR (Peptidyl-prolyl cis-trans isomerase OS=Echinococcus granulosus GN=CYP-1 PE=2 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 9.462e-50
Identity = 100/157 (63.69%), Postives = 115/157 (73.25%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNK 830
            K FFD+++GG+PAGRIV  LF DV P+T ENFRALCTGEKG G       YKGS FHR+IPGFMCQ            +SIYGSKF DENF  KH+ P +LSMANAG  TNGSQFF+ TA T WLDGKHVVFG+V  G DVVK +E VGSSSG+T++
Sbjct:    4 KCFFDISIGGKPAGRIVFALFDDV-PKTVENFRALCTGEKGFG-------YKGSKFHRIIPGFMCQGGDFTAGNGTGGKSIYGSKFEDENFNHKHSKPMMLSMANAGKNTNGSQFFITTAVTSWLDGKHVVFGEVESGEDVVKDMEAVGSSSGKTSQ 152          
BLAST of FC929605 vs. ExPASy Swiss-Prot
Match: PPIE_SCHMA (Peptidyl-prolyl cis-trans isomerase E OS=Schistosoma mansoni PE=1 SV=2)

HSP 1 Score: 196.823 bits (499), Expect = 1.236e-49
Identity = 95/159 (59.75%), Postives = 113/159 (71.07%), Query Frame = 3
Query:  357 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 833
            P+VFFD+ +G   AGRIVMEL +D+ PRTAENFRALCTGE+G G       Y    FHRVIP FMCQ            +SIYG KF DENF  +H G G+LSMAN+GP TNGSQFF+CT K +WLDGKHVVFG+VV+G +VVK +E VGS SG+  +P
Sbjct:  112 PRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERGFG-------YHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKSGKVKEP 263          
BLAST of FC929605 vs. ExPASy Swiss-Prot
Match: PPID_GIBZE (Peptidyl-prolyl cis-trans isomerase D OS=Gibberella zeae GN=CPR6 PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.236e-49
Identity = 95/154 (61.69%), Postives = 114/154 (74.03%), Query Frame = 3
Query:  357 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSG 818
            P+V+FD+++GG+  GRI MEL+AD+ P+TA+NFR+LCTGEKGIGKSGKPLHYKGS FHRVI  FM Q            ESIYG+KF DE F  KH  P +LSMANAGP TNGSQFF+ T  T  LDGKHVVFG+V+ G  VV+ IE + + SG
Sbjct:   11 PRVYFDISIGGKSVGRITMELYADLVPKTADNFRSLCTGEKGIGKSGKPLHYKGSVFHRVIKQFMIQGGDFTAGDGTGGESIYGNKFDDEAFPIKHEKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGEVLNGKSVVRQIENLTTQSG 164          
BLAST of FC929605 vs. ExPASy Swiss-Prot
Match: PPIE_HUMAN (Peptidyl-prolyl cis-trans isomerase E OS=Homo sapiens GN=PPIE PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.614e-49
Identity = 95/164 (57.93%), Postives = 115/164 (70.12%), Query Frame = 3
Query:  330 PINQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGR 821
            PI +    NP+V+ D+ +G +PAGRI M L +DV P TAENFR LCT EKG G       +KGSSFHR+IP FMCQ            +SIYG KF DENF+ KHTGPG+LSMAN+GP TNGSQFF+   KT+WLDGKHVVFG+V EG+DV++ IE  GS  G+
Sbjct:  131 PIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGK 287          
BLAST of FC929605 vs. ExPASy Swiss-Prot
Match: PPIE_MOUSE (Peptidyl-prolyl cis-trans isomerase E OS=Mus musculus GN=Ppie PE=2 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 6.133e-49
Identity = 94/164 (57.32%), Postives = 114/164 (69.51%), Query Frame = 3
Query:  330 PINQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGR 821
            P  +    NP+V+ D+ +G +PAGRI M L +DV P TAENFR LCT EKG G       +KGSSFHR+IP FMCQ            +SIYG KF DENF+ KHTGPG+LSMAN+GP TNGSQFF+   KT+WLDGKHVVFG+V EG+DV++ IE  GS  G+
Sbjct:  131 PTAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGK 287          
The following BLAST results are available for this feature:
BLAST of FC929605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPID_RHIOR7.740e-5262.66Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus ... [more]
PPID_NEUCR1.320e-5159.5241 kDa peptidyl-prolyl cis-trans isomerase OS=Neur... [more]
CYP6_RHIOR1.906e-5061.69Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizop... [more]
PPIE_RHIOR2.490e-5057.99Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus ... [more]
PAL4A_HUMAN7.245e-5059.63Peptidylprolyl cis-trans isomerase A-like 4A OS=Ho... [more]
PPIA_ECHGR9.462e-5063.69Peptidyl-prolyl cis-trans isomerase OS=Echinococcu... [more]
PPIE_SCHMA1.236e-4959.75Peptidyl-prolyl cis-trans isomerase E OS=Schistoso... [more]
PPID_GIBZE1.236e-4961.69Peptidyl-prolyl cis-trans isomerase D OS=Gibberell... [more]
PPIE_HUMAN1.614e-4957.93Peptidyl-prolyl cis-trans isomerase E OS=Homo sapi... [more]
PPIE_MOUSE6.133e-4957.32Peptidyl-prolyl cis-trans isomerase E OS=Mus muscu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2DD02RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2DD02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929605 ID=FC929605; Name=FC929605; organism=Citrus clementina; type=EST; length=834bp
GGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCATTAGCAACCAC
TTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGCCCCACGTAGT
CTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTTATTAGTTTCC
ACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACATCGTTGTTCCG
GGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGGATGTCCATGC
TAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCACGAGGATCAG
AAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATG
CCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCCGCCGG
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAAGTCCGGCAAG
CCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCAAAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACGTTG
TGTTCGGTCAAGTCGTCGAAGGAATGGACGTCGTCAAGGCCATCGAGAAA
GTGGGGTCCAGCTCCGGAAGGACCAACAAGCCCG
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