FC929609

Overview
NameFC929609
Unique NameFC929609
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length889
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929609 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.924e-25
Identity = 69/173 (39.88%), Postives = 105/173 (60.69%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKG----------RLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEG-GMHIVLELSPNGSLASLLYGM-KEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLAE 882
            K F+  EL++AT NF  +NL+G+GG+  V+KG          R  +G +VA+K+L +    +   ++L+E+  +  + HPN   L+GY  EG    +V E  P GSL + L+    + L W IR K+A+G A+GL +LHE  + ++I+RD KAANILL  DF  ++ DFGLA+
Sbjct:   72 KAFTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQL-KPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKVAVGAAKGLTFLHE-AKSQVIYRDFKAANILLDADFNAKLSDFGLAK 242          
BLAST of FC929609 vs. ExPASy Swiss-Prot
Match: Y5393_ARATH (Probable receptor-like protein kinase At5g39030 OS=Arabidopsis thaliana GN=At5g39030 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.166e-24
Identity = 72/169 (42.60%), Postives = 100/169 (59.17%), Query Frame = 1
Query:  397 QKIFSLY---ELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLT--RGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKEKLK-WGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLAE 882
            +K+ ++Y   EL+  T +FS+  +IGKGG+  VY G L NG+ VA+K L   +G+A+    DF++E+  M+   H N   LLG+  EG    IV E   NGSL   +   K   +     Y IALG+A GL YLH GC+ RI+H DIK  NILL  +  P++ DFGLA+
Sbjct:  482 KKLLNMYTYAELKKITKSFSY--IIGKGGFGTVYGGNLSNGRKVAVKVLKDLKGSAE----DFINEVASMSQTSHVNIVSLLGFCFEGSKRAIVYEFLENGSLDQFMSRNKSLTQDVTTLYGIALGIARGLEYLHYGCKTRIVHFDIKPQNILLDGNLCPKVSDFGLAK 644          
BLAST of FC929609 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.166e-24
Identity = 69/190 (36.32%), Postives = 109/190 (57.37%), Query Frame = 1
Query:  355 PRNLFVNSYDSQSPQKIF-------SLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMK--------EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGL 876
            PRN   N+  S +P K+        +L EL     NF  + LIG+G Y  V+ G+ + G+ VAIK+L   +++E  +DF S+L +++ + H +  +LLGY +E    I++ + +  GSL  +L+G K          L W  R KIA G A+GL +LHE  Q  I+HRD++++N+LL +DF  ++ DF L
Sbjct:   39 PRN--PNAPRSGAPAKVLPIEIPSVALDELNRMAGNFGNKALIGEGSYGRVFCGKFK-GEAVAIKKLDASSSEEPDSDFTSQLSVVSRLKHDHFVELLGYCLEANNRILIYQFATKGSLHDVLHGRKGVQGAEPGPVLNWNQRVKIAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFVAKMADFNL 225          
BLAST of FC929609 vs. ExPASy Swiss-Prot
Match: WAKLP_ARATH (Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana GN=WAKL15 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.166e-24
Identity = 73/182 (40.11%), Postives = 104/182 (57.14%), Query Frame = 1
Query:  358 RNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLY-------GMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLA 879
            RNL   S +S    +IF+  E+  AT+NF+  NL+G GG+ EV+KG L +G  VA+KR   G  ++ I   ++E+ I+  V H N  KLLG  IE  M + V E  PNG+L   +Y       G+ + L    R  IA   A+GL YLH      I HRD+K++NILL E+ + ++ DFGL+
Sbjct:  328 RNLL--SINSTGLDRIFTGKEIVKATDNFAKSNLLGFGGFGEVFKGNLDDGTTVAVKRAKLGN-EKSIYQIVNEVQILCQVSHKNLVKLLGCCIELEMPVLVYEFVPNGTLFEHIYGGGGGGGGLYDHLPLRRRLMIAHQTAQGLDYLHSSSSPPIYHRDVKSSNILLDENLDVKVADFGLS 506          
BLAST of FC929609 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.522e-24
Identity = 64/163 (39.26%), Postives = 95/163 (58.28%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMK--EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLA 879
            K F+  E+ + TNNF  + ++GKGG+  VY G +   + VA+K L+  +A      F +E+ ++  V H N   L+GY  EG  + ++ E   NG L   + G +    L WG R KIAL  A+GL YLH GC+  ++HRD+K  NILL E F+ ++ DFGL+
Sbjct:  565 KKFTYAEVLTMTNNF--QKILGKGGFGIVYYGSVNGTEQVAVKMLSHSSAQGY-KQFKAEVELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANGDLDEHMSGKRGGSILNWGTRLKIALEAAQGLEYLHNGCKPLMVHRDVKTTNILLNEHFDTKLADFGLS 724          
BLAST of FC929609 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.522e-24
Identity = 63/161 (39.13%), Postives = 98/161 (60.87%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFG 873
            KIFS  EL+ AT+NFS + ++G+GG   VYK  L +G +VA+KR ++   ++ + +F++E+ +++ ++H N  KLLG  +E  + I V E  PNG L   L+   +   + W +R +IA+ +A  L Y+H      I HRDIK  NILL E +  +I DFG
Sbjct:  414 KIFSSRELEKATDNFSIDRVLGQGGQGTVYKRMLVDGSIVAVKR-SKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDEYDDYMMTWEVRLRIAVEIAGALSYMHSAASFPIFHRDIKTTNILLDEKYRAKISDFG 573          
BLAST of FC929609 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.988e-24
Identity = 68/168 (40.48%), Postives = 96/168 (57.14%), Query Frame = 1
Query:  403 IFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIV-LELSPNGSLASLLYGMK--------EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLA 879
            I    EL+ AT++F   +LIG+G Y  VY G L N    AIK+L      +   +FL+++ +++ + H N  +LLGY ++G   I+  E + NGSL  +L+G K          L W  R KIA+G A GL YLHE     IIHRDIK++N+LL ED   +I DF L+
Sbjct:   60 IIPFSELKEATDDFGSNSLIGEGSYGRVYYGVLNNDLPSAIKKLDSNKQPD--NEFLAQVSMVSRLKHDNFVQLLGYCVDGNSRILSYEFANNGSLHDILHGRKGVKGAQPGPVLSWYQRVKIAVGAARGLEYLHEKANPHIIHRDIKSSNVLLFEDDVAKIADFDLS 225          
BLAST of FC929609 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.988e-24
Identity = 68/167 (40.72%), Postives = 99/167 (59.28%), Query Frame = 1
Query:  388 QSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLLYGMK--EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLA 879
            +S  + F+  ++   TNNF    +IGKGG+  VY+G L N Q  AIK L+  +A     +F +E+ ++  V H     L+GY   + G+ ++ EL   G+L   L G      L W IR KIAL  A G+ YLH GC+ +I+HRD+K+ NILL+E+FE +I DFGL+
Sbjct:  544 KSENRRFTYSDVNKMTNNFQV--VIGKGGFGVVYQGCLNNEQ-AAIKVLSHSSAQGY-KEFKTEVELLLRVHHEKLVSLIGYCDDDNGLALIYELMGKGNLKEHLSGKPGCSVLSWPIRLKIALESAIGIEYLHTGCKPKIVHRDVKSTNILLSEEFEAKIADFGLS 706          
BLAST of FC929609 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.988e-24
Identity = 61/161 (37.89%), Postives = 100/161 (62.11%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKEKLK--WGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFG 873
            +IFS  EL+ AT+NFS   ++G+GG   VYKG L +G+ VA+K+ ++   ++ + +F++E+ I++ ++H +  KLLG  +E  +  +V E  PNG+L   ++   +     WG+R +IA+ +A  L YLH      I HRDIK+ NILL E +  ++ DFG
Sbjct:  437 RIFSSRELEKATDNFSESRILGQGGQGTVYKGMLVDGRTVAVKK-SKVVDEDKLEEFINEVVILSQINHRHVVKLLGCCLETEVPTLVYEFIPNGNLFQHIHEESDDYTKTWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRTKVSDFG 596          
BLAST of FC929609 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.988e-24
Identity = 68/188 (36.17%), Postives = 105/188 (55.85%), Query Frame = 1
Query:  328 SSMREGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMKE---KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLA 879
            S +  G D   +L +   +S+   K  +++EL  AT+NFS  N+IG GG+  VYK  L NG  +A+K+LT G    +  +F +E+ +++   H N   L GY +     I++     NGSL   L+   E   +L W  R  I  G + GL Y+H+ C+  I+HRDIK++NILL  +F+  + DFGL+
Sbjct:  765 SEVPPGSDKDISLVLLFGNSRYEVKDLTIFELLKATDNFSQANIIGCGGFGLVYKATLDNGTKLAVKKLT-GDYGMMEKEFKAEVEVLSRAKHENLVALQGYCVHDSARILIYSFMENGSLDYWLHENPEGPAQLDWPKRLNIMRGASSGLAYMHQICEPHIVHRDIKSSNILLDGNFKAYVADFGLS 951          
The following BLAST results are available for this feature:
BLAST of FC929609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APK2A_ARATH8.924e-2539.88Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
Y5393_ARATH1.166e-2442.60Probable receptor-like protein kinase At5g39030 OS... [more]
Y2197_ARATH1.166e-2436.32Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
WAKLP_ARATH1.166e-2440.11Wall-associated receptor kinase-like 15 OS=Arabido... [more]
Y5181_ARATH1.522e-2439.26Probable LRR receptor-like serine/threonine-protei... [more]
WAKLC_ARATH1.522e-2439.13Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
Y2706_ARATH1.988e-2440.48Probable receptor-like protein kinase At2g47060 OS... [more]
Y1755_ARATH1.988e-2440.72Probable LRR receptor-like serine/threonine-protei... [more]
WAKLK_ARATH1.988e-2437.89Putative wall-associated receptor kinase-like 11 O... [more]
PSYR1_ARATH1.988e-2436.17Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2DD06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2DD06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929609 ID=FC929609; Name=FC929609; organism=Citrus clementina; type=EST; length=889bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAAT
CATTCATAGAGATATTAAAGCTGCCAATATTTTGCTCACTGAGGACTTCG
AGCCTCAGATTTGTGATTTTGGACTAGCCGAATGGCTAC
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