FC929609

Overview
NameFC929609
Unique NameFC929609
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length889
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15029 contig Ccv1_Contig15029:1..889. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929609 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.054e-25
Identity = 64/180 (35.56%), Postives = 108/180 (60.00%), Query Frame = 1
Query:  343 GIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKE--KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFG 873
            G+ + + L     + QS  KIFS  EL+ AT+NF+   ++G+GG   VYKG L +G++VA+KR ++   ++ + +F++E+G+++ ++H N  KL+G  +E  + I V E  PNG L   L+   +   + W +R +I++ +A  L YLH      + HRD+K  NILL E +  ++ DFG
Sbjct:  389 GLLLKQQLTTRGGNVQS-SKIFSSKELEKATDNFNMNRVLGQGGQGTVYKGMLVDGRIVAVKR-SKVLDEDKVEEFINEVGVLSQINHRNIVKLMGCCLETEVPILVYEHIPNGDLFKRLHHDSDDYTMTWDVRLRISVEIAGALAYLHSAASTPVYHRDVKTTNILLDEKYRAKVSDFG 566          
BLAST of FC929609 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 1.054e-25
Identity = 72/201 (35.82%), Postives = 110/201 (54.73%), Query Frame = 1
Query:  295 LYPLKLSIRRSSSMR-----EGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFG 873
            LY      RRSS MR      G  + +        +    KIFS  EL+ AT+NF+   ++G+GG   VYKG L +G++VA+KR ++   ++ + +F++E+ ++A ++H N  KLLG  +E  + + V E  PNG L   L    +   + W +R  IA+ +A  L YLH      I HRDIK  NILL E ++ ++ DFG
Sbjct:  370 LYKFIKKQRRSSRMRVFFRRNGGMLLKQQLARKEGNVEMSKIFSSNELEKATDNFNTNRVLGQGGQGTVYKGMLVDGRIVAVKR-SKAMDEDKVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLRDECDDYIMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFG 569          
BLAST of FC929609 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.054e-25
Identity = 63/161 (39.13%), Postives = 99/161 (61.49%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKE--KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFG 873
            KIFS  EL+ AT+NFS + ++G+GG   VYKG L +G +VA+KR ++   ++ + +F++E+ +++ ++H N  KLLG  +E  + I V E  PNG L   L+   +   + W +R +IA+ +A  L Y+H      I HRDIK  NILL E +  ++ DFG
Sbjct:  415 KIFSSKELRKATDNFSIDRVLGQGGQGTVYKGMLVDGSIVAVKR-SKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDESDDYTMTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVSDFG 574          
BLAST of FC929609 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.054e-25
Identity = 64/161 (39.75%), Postives = 101/161 (62.73%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKE-KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLAE 882
            FSL E++  T+NF   N+IG GG+ +VYKG +  G  VAIK+ +   +++ + +F +E+ +++ + H +   L+GY  EGG M ++ +    G+L   LY  K  +L W  R +IA+G A GL YLH G +  IIHRD+K  NILL E++  ++ DFGL++
Sbjct:  509 FSLSEIKHGTHNFDESNVIGVGGFGKVYKGVIDGGTKVAIKK-SNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLIYDYMSLGTLREHLYNTKRPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSK 668          
BLAST of FC929609 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.377e-25
Identity = 85/262 (32.44%), Postives = 128/262 (48.85%), Query Frame = 1
Query:  148 LEDYFRSEDSETCSSKEPCSETKPESKSNSRWHLFYDLFRNKSKKSLVTLYPLKLSIRRSSSMREGIDMPRNLFVNSYDSQSPQK---IFS--------LYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLAEWL 888
            LE    SE S    +   C      + +NSR  L Y   ++KS+KS ++ + + L    SS +   + +             P+K   +F+        L ++ +AT+N + +  IG+G +  VY+  L +G++ A+KRL   +        + E+  +  V H N  KL G+ +     ++L    P GSL  +L+G+  K   L W  RY +ALGVA GL YLH  C   I+HRDIK  NIL+  D EP I DFGLA  L
Sbjct:  718 LEGQLLSEPSSFSGNPNLCIPHSFSASNNSRSALKYCKDQSKSRKSGLSTWQIVLIAVLSSLLVLVVVLALVFICLRRRKGRPEKDAYVFTQEEGPSLLLNKVLAATDNLNEKYTIGRGAHGIVYRASLGSGKVYAVKRLVFASHIRANQSMMREIDTIGKVRHRNLIKLEGFWLRKDDGLMLYRYMPKGSLYDVLHGVSPKENVLDWSARYNVALGVAHGLAYLHYDCHPPIVHRDIKPENILMDSDLEPHIGDFGLARLL 979          
BLAST of FC929609 vs. ExPASy Swiss-Prot
Match: ACCR1_ARATH (Serine/threonine-protein kinase-like protein CCR1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.377e-25
Identity = 65/161 (40.37%), Postives = 94/161 (58.39%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEI-IADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGL 876
            ++F L EL+ ATN F   N +G+G Y  VYK  L +G+ VA+KR    T       +F +EL I+ ++ H N   LLGY  E G  + V E  P+G+L   L+     L W +R KIA+  A+GL YLH   + RIIH D+K++N+LL  ++  ++ DFGL
Sbjct:  506 QVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLADGRQVAVKRANAATIIHTNTREFETELEILCNIRHCNIVNLLGYSTEMGERLLVYEYMPHGTLHDHLHSGFSPLSWSLRIKIAMQTAKGLEYLHNEAEPRIIHGDVKSSNVLLDSEWVARVADFGL 666          
BLAST of FC929609 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.067e-25
Identity = 68/164 (41.46%), Postives = 102/164 (62.20%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQ-LVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKEK----LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLA 879
            FS++E++SATN+F  + +IG GG+  VYKG++  G  LVA+KRL   T+++   +F +EL +++ + H +   L+GY  E   M +V E  P+G+L   L+   +     L W  R +I +G A GL YLH G +  IIHRDIK  NILL E+F  ++ DFGL+
Sbjct:  506 FSIFEIKSATNDFEDKLIIGVGGFGSVYKGQIDGGATLVAVKRLEI-TSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLS 668          
BLAST of FC929609 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.067e-25
Identity = 65/163 (39.88%), Postives = 95/163 (58.28%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMK-EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLAE 882
            + F   E+  ATN F   +L+G GG+  VYKG L +G  VA+KR     +++ +A+F +E+ +++ + H +   L+GY  E   M +V E   NG L S LYG     L W  R +I +G A GL YLH G  + IIHRD+K  NILL E+   ++ DFGL++
Sbjct:  496 RCFMFQEIMDATNKFDESSLLGVGGFGRVYKGTLEDGTKVAVKR-GNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSK 657          
BLAST of FC929609 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.067e-25
Identity = 66/163 (40.49%), Postives = 93/163 (57.06%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIAD-FLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLA 879
            +++  LQ ATN+FS EN+IG+G    VY+    NG+++AIK++          D FL  +  M+ + HPN   L GY  E G  + V E   NG+L   L+   ++   L W  R K+ALG A+ L YLHE C   I+HR+ K+ANILL E+  P + D GLA
Sbjct:  383 YTVSSLQVATNSFSQENIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEELNPHLSDSGLA 545          
BLAST of FC929609 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 3.067e-25
Identity = 73/172 (42.44%), Postives = 103/172 (59.88%), Query Frame = 1
Query:  385 SQSPQKIFSLYE-LQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRL---TRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGL 876
            +Q P  +   YE L+ AT +F     +G+GG   VYKG L +G++VA+K+L   TR  AD+    F +E+ +++ V H N  +LLG  IEG   + V E   N SL  +L+ MK     L W  R+ I +G++EGL YLH G + +IIHRDIK +NILL  +  P+I DFGL
Sbjct:  298 AQVPSCVNFKYEMLEKATESFHDSMKLGQGGAGSVYKGILPDGRIVAVKKLFFNTREWADQ----FFNEVNLISGVQHKNLVRLLGCSIEGPKSLLVYEYVHNRSLDQILF-MKNTVHILSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGL 464          
The following BLAST results are available for this feature:
BLAST of FC929609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
WAKLI_ARATH1.054e-2535.56Wall-associated receptor kinase-like 22 OS=Arabido... [more]
WAKLD_ARATH1.054e-2535.82Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
WAKLA_ARATH1.054e-2539.13Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
ANX2_ARATH1.054e-2539.75Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]
PEPR1_ARATH1.377e-2532.44Leucine-rich repeat receptor-like protein kinase P... [more]
ACCR1_ARATH1.377e-2540.37Serine/threonine-protein kinase-like protein CCR1 ... [more]
Y5900_ARATH3.067e-2541.46Putative receptor-like protein kinase At5g39000 OS... [more]
THE1_ARATH3.067e-2539.88Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
SRF8_ARATH3.067e-2540.49Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
CRK1_ARATH3.067e-2542.44Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2DD06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2DD06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929609 ID=FC929609; Name=FC929609; organism=Citrus clementina; type=EST; length=889bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAAT
CATTCATAGAGATATTAAAGCTGCCAATATTTTGCTCACTGAGGACTTCG
AGCCTCAGATTTGTGATTTTGGACTAGCCGAATGGCTAC
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