FC929615

Overview
NameFC929615
Unique NameFC929615
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length850
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.980e-19
Identity = 63/187 (33.69%), Postives = 100/187 (53.48%), Query Frame = 1
Query:  301 PLKLSIRRSSSMREGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTAD-EIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLY---GMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTED 846
            P + S++R++S              S+   +  K F++  LQ  TN+FS ENLIG G    VY+  L  G+L A+++L + + + E    FL  +  +  + H N  +L+G+  E    +++ E   NG+L  LL+    +K +L W +R +IAL  A+ L YLHE C    IHR + +ANILL +D
Sbjct:  444 PAEASLKRTTS-------------KSHGPLTAVKHFTVASLQQHTNSFSHENLIGTGMLGSVYRAELPGGKLFAVRKLDKKSPNHEEEGKFLELVNNIDRIRHANIVQLVGFCSEHSQRLLIHEYCRNGTLHDLLHIDDRLKIELSWNVRVRIALEAAKALEYLHEICDPPSIHRNFKSANILLDDD 617          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.980e-19
Identity = 56/150 (37.33%), Postives = 89/150 (59.33%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKE-KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            FSL E++  T NF   N+IG GG+ +VYKG +     VA+K+ +   +++ + +F +E+ +++ + H +   L+GY  EGG M +V +    G+L   LY  K+ +L W  R +IA+G A GL YLH G +  IIHR     NIL+ E++
Sbjct:  505 FSLPEIKHGTQNFDDSNVIGVGGFGKVYKGVIDGTTKVAVKK-SNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLVYDYMAFGTLREHLYNTKKPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILVDENW 653          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.198e-19
Identity = 58/153 (37.91%), Postives = 84/153 (54.90%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMK--EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            K F+  E+ + TNNF  + ++GKGG+  VY G +   + VA+K L+  +A      F +E+ ++  V H N   L+GY  EG  + ++ E   NG L   + G +    L WG R KIAL  A+GL YLH GC+  ++HR     NILL E F
Sbjct:  565 KKFTYAEVLTMTNNF--QKILGKGGFGIVYYGSVNGTEQVAVKMLSHSSAQGY-KQFKAEVELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANGDLDEHMSGKRGGSILNWGTRLKIALEAAQGLEYLHNGCKPLMVHRDVKTTNILLNEHF 714          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.198e-19
Identity = 61/178 (34.27%), Postives = 95/178 (53.37%), Query Frame = 1
Query:  328 SSMREGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMKE---KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            S +  G D   +L +   +S+   K  +++EL  AT+NFS  N+IG GG+  VYK  L NG  +A+K+LT G    +  +F +E+ +++   H N   L GY +     I++     NGSL   L+   E   +L W  R  I  G + GL Y+H+ C+  I+HR   ++NILL  +F
Sbjct:  765 SEVPPGSDKDISLVLLFGNSRYEVKDLTIFELLKATDNFSQANIIGCGGFGLVYKATLDNGTKLAVKKLT-GDYGMMEKEFKAEVEVLSRAKHENLVALQGYCVHDSARILIYSFMENGSLDYWLHENPEGPAQLDWPKRLNIMRGASSGLAYMHQICEPHIVHRDIKSSNILLDGNF 941          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.198e-19
Identity = 65/170 (38.24%), Postives = 96/170 (56.47%), Query Frame = 1
Query:  355 PRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMK--EK---LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTED 846
            P ++ V ++  Q  +  FS  +L  ATN FS  ++IG GG+ EV+K  L++G  VAIK+L R  + +   +F++E+  +  + H N   LLGY   G    +V E    GSL  +L+G +  EK   L W  R KIA G A+GL +LH  C   IIHR   ++N+LL +D
Sbjct:  811 PLSINVATFQRQLRKLKFS--QLIEATNGFSAASMIGHGGFGEVFKATLKDGSSVAIKKLIR-LSCQGDREFMAEMETLGKIKHRNLVPLLGYCKIGEERLLVYEFMQYGSLEEVLHGPRTGEKRRILGWEERKKIAKGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDQD 977          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.789e-19
Identity = 58/147 (39.46%), Postives = 84/147 (57.14%), Query Frame = 1
Query:  412 LYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGM-KEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTED 846
            L  ++ ATN+F     IG GG+ +VYKG L +G  VA+KR     + + +A+F +E+ +++   H +   L+GY  E   M +V E   NG+L S LYG     L W  R +I +G A GL YLH G  + +IHR   +ANILL E+
Sbjct:  472 LVAVKEATNSFDENRAIGVGGFGKVYKGELHDGTKVAVKR-ANPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILVYEYMENGTLKSHLYGSGLLSLSWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLDEN 617          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: Y1570_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g05700 OS=Arabidopsis thaliana GN=At1g05700 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.789e-19
Identity = 66/170 (38.82%), Postives = 92/170 (54.12%), Query Frame = 1
Query:  358 RNLFVNSYDSQSPQK------IFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGM-KEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTE 843
            RN  VNS    SP        +F+  ++   TNNF    ++GKGG+  VY G   N Q VA+K L+  T+ +   +F SE+ ++  V H N   L+GY  EG  M ++ E   NG++A  L G  +  L W  R +IAL  A+GL YLH GC+  I+HR    +NILL E
Sbjct:  538 RNKSVNSAPQTSPMAKSENKLLFTFADVIKMTNNFG--QVLGKGGFGTVYHGFYDNLQ-VAVKLLSE-TSAQGFKEFRSEVEVLVRVHHVNLTALIGYFHEGDQMGLIYEFMANGNMADHLAGKYQHTLSWRQRLQIALDAAQGLEYLHCGCKPPIVHRDVKTSNILLNE 703          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 6.789e-19
Identity = 70/203 (34.48%), Postives = 105/203 (51.72%), Query Frame = 1
Query:  247 LFYDLFRNKSKKSLVTLYPLKLSIRRSSSMREGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEKLK---WGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTE 843
            LF+  +R+KS    +TL     +   ++++   +    + F+ S       K F+L  ++ AT  +  + LIG+GG+  VY+G L +GQ VA+K +   T+ +   +F +EL +++ + H N   LLGY  E    I V     NGSL   LYG   K K   W  R  IALG A GL YLH    R +IHR   ++NILL +
Sbjct:  541 LFFCRYRHKS----ITLEGFGKTYPMATNIIFSLPSKDDFFIKSVSV----KPFTLEYIEQATEQY--KTLIGEGGFGSVYRGTLDDGQEVAVK-VRSSTSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQ 732          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 94.7449 bits (234), Expect = 6.789e-19
Identity = 55/135 (40.74%), Postives = 76/135 (56.30%), Query Frame = 1
Query:  451 ENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMK-EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            EN+IGKGG   VY+G + N   VAIKRL           F +E+  +  + H +  +LLGY      +++L E  PNGSL  LL+G K   L+W  R+++A+  A+GL YLH  C   I+HR   + NILL  DF
Sbjct:  695 ENIIGKGGAGIVYRGSMPNNVDVAIKRLVGRGTGRSDHGFTAEIQTLGRIRHRHIVRLLGYVANKDTNLLLYEYMPNGSLGELLHGSKGGHLQWETRHRVAVEAAKGLCYLHHDCSPLILHRDVKSNNILLDSDF 829          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.867e-19
Identity = 56/153 (36.60%), Postives = 86/153 (56.21%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLLYGMK--EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            K F+  E+++ T+NF  E ++G+GG+  VY G L   Q +A+K L++ +      +F +E+ ++  V H N   L+GY   E  + ++ E +PNG L   L G +    LKW  R KI +  A+GL YLH GC+  ++HR     NILL E F
Sbjct:  561 KRFTYSEVEALTDNF--ERVLGEGGFGVVYHGILNGTQPIAVKLLSQSSVQGY-KEFKAEVELLLRVHHVNLVSLVGYCDEESNLALLYEYAPNGDLKQHLSGERGGSPLKWSSRLKIVVETAQGLEYLHTGCKPPMVHRDVKTTNILLDEHF 710          
The following BLAST results are available for this feature:
BLAST of FC929615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 256
Match NameE-valueIdentityDescription
SRF1_ARATH3.980e-1933.69Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsi... [more]
ANX1_ARATH3.980e-1937.33Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
Y5181_ARATH5.198e-1937.91Probable LRR receptor-like serine/threonine-protei... [more]
PSYR1_ARATH5.198e-1934.27Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
BRL2_ARATH5.198e-1938.24Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
Y5597_ARATH6.789e-1939.46Probable receptor-like protein kinase At5g59700 OS... [more]
Y1570_ARATH6.789e-1938.82Probable LRR receptor-like serine/threonine-protei... [more]
NORK_MEDTR6.789e-1934.48Nodulation receptor kinase OS=Medicago truncatula ... [more]
CLV1_ARATH6.789e-1940.74Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
Y2289_ARATH8.867e-1936.60Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2DD12RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2DD12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929615 ID=FC929615; Name=FC929615; organism=Citrus clementina; type=EST; length=850bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAAT
CATTCATAGGAGATATTAAGCTGCCAATATTTTGCTCACTGAGGACTTCG
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