FC929615

Overview
NameFC929615
Unique NameFC929615
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length850
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: IRAK4_BOVIN (Interleukin-1 receptor-associated kinase 4 OS=Bos taurus GN=IRAK4 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.580e-18
Identity = 64/160 (40.00%), Postives = 86/160 (53.75%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFE------NLIGKGGYAEVYKGRLRNGQLVAIKRLTRG---TADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMK--EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            FS +EL+  TNNF         N +G+GG+  VYKG + N + VA+K+L      + +E+   F  E+ +MA   H N  +LLG+  +G  + +V    PNGSL   L  +     L W +R KIA G A GL YLHE      IHR   +ANILL EDF
Sbjct:  169 FSFFELKDVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-RTVAVKKLAAMVDISTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWNMRCKIAQGAANGLSYLHE---NHHIHRDIKSANILLDEDF 324          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.580e-18
Identity = 57/147 (38.78%), Postives = 82/147 (55.78%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMK--EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILL 837
            F    L+ AT +F   N +G+GG+  VYKG L +G+ +A+KRL          DF +E+ +++ V+H N  +LLG    G   + V E   N SL   ++ +   + L W  RY I +G AEGL+YLHE    +IIHR   A+NILL
Sbjct:  313 FKYSTLEKATGSFDNANKLGQGGFGTVYKGVLPDGRDIAVKRLFFNNRHRA-TDFYNEVNMISTVEHKNLVRLLGCSCSGPESLLVYEYLQNKSLDRFIFDVNRGKTLDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILL 458          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: ACCR2_ARATH (Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.580e-18
Identity = 62/148 (41.89%), Postives = 78/148 (52.70%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTA-DEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILL 837
            KIF L EL+ AT+ F   N +G+G +  VYK  L +G  VA+KR    T        F SEL I+  + H N   LLGY  E G  + V E  P+G+L   L+G   +L W +R KI L  A GL YLH      IIHR    +NILL
Sbjct:  505 KIFRLSELKDATHGFKEFNELGRGSFGFVYKAVLSDGIHVAVKRANAATIIHSNNRGFESELEILCKIRHNNIVNLLGYCSEMGERLLVYEYMPHGTLHDHLHGDLSQLDWSMRLKIMLQAARGLDYLHNEVDPPIIHRDVKTSNILL 652          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.369e-18
Identity = 69/204 (33.82%), Postives = 98/204 (48.04%), Query Frame = 1
Query:  283 SLVTLYPLKLSIRRSSSMREGIDMPR-NLFVNSYDSQSPQKIF---------SLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMKEK----LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            +LV    L    R+  ++R+  D P  N +  S   Q   K+F          L +L  AT  F  +N+I  G    +YKGRL +G L+ IKRL      E   +F +E+  +  V + N   LLGY +     +++ E   NG L   L+   E+    L W  R KIA+G A+GL +LH  C  RIIHR   +  ILLT +F
Sbjct:  240 ALVVGVVLFFYFRKLGAVRKKQDDPEGNRWAKSLKGQKGVKVFMFKKSVSKMKLSDLMKATEEFKKDNIIATGRTGTMYKGRLEDGSLLMIKRLQDSQRSE--KEFDAEMKTLGSVKNRNLVPLLGYCVANKERLLMYEYMANGYLYDQLHPADEESFKPLDWPSRLKIAIGTAKGLAWLHHSCNPRIIHRNISSKCILLTAEF 441          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.369e-18
Identity = 74/208 (35.58%), Postives = 106/208 (50.96%), Query Frame = 1
Query:  247 LFYDLFRNKSKKSLVTL-------YPLKLSIRRSSSMREGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEKLK---WGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILL 837
            LF+  +R+KS    +TL       YP+  +I  S   ++      + F+ S       K F+L  ++ AT  +  + LIG+GG+  VY+G L +GQ VA+K +   T+ +   +F +EL +++ + H N   LLGY  E    I V     NGSL   LYG   K K   W  R  IALG A GL YLH    R +IHR   ++NILL
Sbjct:  539 LFFCRYRHKS----ITLEGFGGKTYPMATNIIFSLPSKD------DFFIKSVSV----KPFTLEYIELATEKY--KTLIGEGGFGSVYRGTLDDGQEVAVK-VRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILL 729          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.400e-18
Identity = 55/153 (35.95%), Postives = 90/153 (58.82%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEKLK--WGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            K+FS  EL+ AT+NF+   +IG+GG   VYKG L +G+ VA+K+ +    ++ + +F++E+ I++ ++H +  KLLG  +E  + I V E  PNG+L   L+   +     WG+R +IA+ ++    YLH      I HR   + NILL E +
Sbjct:  440 KLFSSRELEKATDNFNDNRVIGQGGQGTVYKGMLVDGRSVAVKK-SNVVDEDKLQEFINEVIILSQINHRHVVKLLGCCLETEVPILVYEFIPNGNLFQHLHEEFDDYTALWGVRMRIAVDISGAFSYLHTAACSPIYHRDIKSTNILLDEKY 591          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.400e-18
Identity = 56/155 (36.13%), Postives = 91/155 (58.71%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKR-LTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYG----MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTED 846
            ++F+  EL+ A + F  E+++GKG ++ VYKG LR+G  VA+KR +      +   +F +EL +++ ++H +   LLGY  E G   +V E   +GSL + L+G    +KE+L W  R  IA+  A G+ YLH      +IHR   ++NIL+ E+
Sbjct:  498 RVFTYEELEKAADGFKEESIVGKGSFSCVYKGVLRDGTTVAVKRAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHGSLHNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEE 652          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.747e-18
Identity = 59/154 (38.31%), Postives = 87/154 (56.49%), Query Frame = 1
Query:  388 QSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIE-GGMHIVLELSPNGSLASLLYGMKEK-LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTE 843
            ++ ++ F   E+ + TNNF  E +IGKGG+ +VY G + NG+ VA+K L+  +A     +F +E+ ++  V H N   L+GY  E   M ++ E   N +L   L G +   L W  R KI+L  A+GL YLH GC+  I+HR     NILL E
Sbjct:  558 KTAKRYFKYSEVVNITNNF--ERVIGKGGFGKVYHGVI-NGEQVAVKVLSEESAQGY-KEFRAEVDLLMRVHHTNLTSLVGYCNEINHMVLIYEYMANENLGDYLAGKRSFILSWEERLKISLDAAQGLEYLHNGCKPPIVHRDVKPTNILLNE 707          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: RPK2_ARATH (LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana GN=RPK2 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.747e-18
Identity = 52/140 (37.14%), Postives = 75/140 (53.57%), Query Frame = 1
Query:  430 ATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTED 846
            AT NF+  NLIG GG+   YK  +    +VAIKRL+ G    +   F +E+  +  + HPN   L+GY   E  M +V    P G+L   +     +  W + +KIAL +A  L YLH+ C  R++HR    +NILL +D
Sbjct:  870 ATGNFNASNLIGNGGFGATYKAEISQDVVVAIKRLSIGRFQGV-QQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLVYNYLPGGNLEKFIQERSTR-DWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDD 1007          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.506e-18
Identity = 58/152 (38.16%), Postives = 83/152 (54.61%), Query Frame = 1
Query:  403 IFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEG-GMHIVLELSPNGSLASLLYGM--KEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            I +  ++   T N + + +IG G  + VYK  L++ + +AIKRL       +  +F +EL  +  + H N   L GY +   G  +  +   NGSL  LL+G   K KL W  R KIA+G A+GL YLH  C  RIIHR   ++NILL E+F
Sbjct:  635 IHTFDDIMRVTENLNEKFIIGYGASSTVYKCALKSSRPIAIKRLYNQYPHNL-REFETELETIGSIRHRNIVSLHGYALSPTGNLLFYDYMENGSLWDLLHGSLKKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDENF 785          
The following BLAST results are available for this feature:
BLAST of FC929615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 256
Match NameE-valueIdentityDescription
IRAK4_BOVIN2.580e-1840.00Interleukin-1 receptor-associated kinase 4 OS=Bos ... [more]
CRK2_ARATH2.580e-1838.78Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]
ACCR2_ARATH2.580e-1841.89Serine/threonine-protein kinase-like protein CCR2 ... [more]
Y5838_ARATH3.369e-1833.82Probably inactive leucine-rich repeat receptor-lik... [more]
NORK_PEA3.369e-1835.58Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
WAKLL_ARATH4.400e-1835.95Putative wall-associated receptor kinase-like 13 O... [more]
ACR4_ARATH4.400e-1836.13Serine/threonine-protein kinase-like protein ACR4 ... [more]
SIRK_ARATH5.747e-1838.31Senescence-induced receptor-like serine/threonine-... [more]
RPK2_ARATH5.747e-1837.14LRR receptor-like serine/threonine-protein kinase ... [more]
ERL1_ARATH7.506e-1838.16LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2DD12RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2DD12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929615 ID=FC929615; Name=FC929615; organism=Citrus clementina; type=EST; length=850bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAAT
CATTCATAGGAGATATTAAGCTGCCAATATTTTGCTCACTGAGGACTTCG
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