FC929615

Overview
NameFC929615
Unique NameFC929615
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length850
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15029 contig Ccv1_Contig15029:1..850. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.803e-18
Identity = 54/151 (35.76%), Postives = 82/151 (54.30%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEG-GMHIVLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            FS  ++   TNNF  + ++GKGG+  VY G +   + VA+K L+  ++      F +E+ ++  V H N   L+GY  EG  + ++ E   NG L   + G + +  L WG R KI +  A+GL YLH GC+  ++HR     NILL E F
Sbjct:  568 FSYSQVVIMTNNF--QRILGKGGFGMVYHGFVNGTEQVAVKILSHSSSQGY-KQFKAEVELLLRVHHKNLVGLVGYCDEGDNLALIYEYMANGDLKEHMSGTRNRFILNWGTRLKIVIESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHF 715          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 9.803e-18
Identity = 58/164 (35.37%), Postives = 94/164 (57.32%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKG----------RLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLY---GMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            K FSL EL+SAT NF  ++++G+GG+  V+KG          +   G ++A+KRL +    +   ++L+E+  +  +DHPN  KL+GY +E     +V E    GSL + L+      + L W  R ++ALG A GL +LH   Q ++I+R + A+NILL  ++
Sbjct:   54 KNFSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQ-EGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLH-NAQPQVIYRDFKASNILLDSNY 215          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.280e-17
Identity = 58/151 (38.41%), Postives = 86/151 (56.95%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            + L  ++ AT++F    +IG GG+ +VYKG LR+   VA+KR     + + +A+F +E+ ++    H +   L+GY  E   M IV E    G+L   LY + +K  L W  R +I +G A GL YLH G  R IIHR   +ANILL ++F
Sbjct:  475 YPLALIKEATDDFDESLVIGVGGFGKVYKGVLRDKTEVAVKR-GAPQSRQGLAEFKTEVEMLTQFRHRHLVSLIGYCDENSEMIIVYEYMEKGTLKDHLYDLDDKPRLSWRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNF 624          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.280e-17
Identity = 59/145 (40.69%), Postives = 80/145 (55.17%), Query Frame = 1
Query:  418 ELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMK-EKLKWGIRYKIALGVAEGLLYLH-EGCQRRIIHRRY*AANILLTE 843
            ++ SATNNF  + LIGKGG+  VYK  L +G   AIKR   G+   I+ +F +E+ +++ + H +   L GY  E   M +V E    G+L   LYG     L W  R +I +G A GL YLH  G +  IIHR   + NILL E
Sbjct:  480 DILSATNNFDEQLLIGKGGFGYVYKAILPDGTKAAIKRGKTGSGQGIL-EFQTEIQVLSRIRHRHLVSLTGYCEENSEMILVYEFMEKGTLKEHLYGSNLPSLTWKQRLEICIGAARGLDYLHSSGSEGAIIHRDVKSTNILLDE 623          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.280e-17
Identity = 58/156 (37.18%), Postives = 86/156 (55.13%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGI-----EGGMHIVLELSPNGSLASLLY----GMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTED 846
            F + EL+ ATNNFS +N IG+GG+  VYKG L +G ++A+K++   +  +  A+F +E+ I++++ H N   L G  +     E   ++V +   NG+L   L+      K  L W  R  I L VA+GL YLH G +  I HR     NILL  D
Sbjct:  283 FKIEELEKATNNFSQKNFIGRGGFGFVYKGVLPDGSVIAVKKVIE-SEFQGDAEFRNEVEIISNLKHRNLVPLRGCSMVDDDSESQRYLVYDYMSNGNLDDHLFPRGETTKMPLSWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVD 437          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.280e-17
Identity = 56/149 (37.58%), Postives = 85/149 (57.05%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILL 837
            KIF+   ++ ATN ++   ++G+GG   VYKG L +  +VAIK+   G + + +  F++E+ +++ ++H N  KLLG  +E  +  +V E   NG+L   L+G  +   L W  R KIA+ VA  L YLH      IIHR    ANILL
Sbjct:  395 KIFTEDGMKKATNGYAESRILGQGGQGTVYKGILPDNSIVAIKKARLGDSSQ-VEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITNGTLFDHLHGSMIDSSLTWEHRLKIAIEVAGTLAYLHSSASIPIIHRDIKTANILL 542          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: SRF2_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsis thaliana GN=SRF2 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.280e-17
Identity = 58/152 (38.16%), Postives = 82/152 (53.95%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTAD-EIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYG-MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTED 846
            K+FS  ELQ ATN FS ENL+G+G    VY+ +L +GQ   ++ +   +        F   L   + + HPN   LLG+ IE G H +V E   + SL + ++  + + L WG+R +IA+GVA  L YLH      I H    A NILL E+
Sbjct:  401 KLFSAAELQLATNCFSEENLLGEGPLGSVYRAKLPDGQFAVVRNIPMSSLSLHEEEQFTEVLQTASKLRHPNIVTLLGFCIENGEHLLVYEYVGHLSLYNAMHDEVYKPLSWGLRLRIAIGVARALDYLHSSFCPPIAHSDLKATNILLDEE 552          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.280e-17
Identity = 49/150 (32.67%), Postives = 86/150 (57.33%), Query Frame = 1
Query:  418 ELQSATNNFSFENLIGKGGYAEVYKGRLRN--GQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIE-GGMHIVLELSPNGSLASLLYGMKEK----LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTED 846
            +L +AT+ F    ++G GG+  V++G L +     +A+K++T  +   +  +F++E+  +  + H N   L G+  +   + ++ +  PNGSL SLLY    +    L W  R+KIA G+A GLLYLHE  ++ +IHR    +N+L+ +D
Sbjct:  353 DLYAATDGFKENRIVGTGGFGTVFRGNLSSPSSDQIAVKKITPNSMQGV-REFIAEIESLGRLRHKNLVNLQGWCKQKNDLLLIYDYIPNGSLDSLLYSRPRQSGVVLSWNARFKIAKGIASGLLYLHEEWEKVVIHRDIKPSNVLIEDD 501          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.280e-17
Identity = 49/145 (33.79%), Postives = 84/145 (57.93%), Query Frame = 1
Query:  418 ELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLLYGMKEK----LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILL 837
            +L  AT+ F    +IG GG+  V+KG+L N   +A+K++   +   +  +F++E+  +  + H N   L G+   +  + ++ +  PNGSL SLLY +  +    L W  R++IA G+A GLLYLHE  ++ +IHR    +N+L+
Sbjct:  359 DLYVATDGFKKTGIIGTGGFGTVFKGKLPNSDPIAVKKIIPSSRQGV-REFVAEIESLGKLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLYTVPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLI 502          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: Y5392_ARATH (Probable receptor-like protein kinase At5g39020 OS=Arabidopsis thaliana GN=At5g39020 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.672e-17
Identity = 59/148 (39.86%), Postives = 81/148 (54.73%), Query Frame = 1
Query:  418 ELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLT--RGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKEKL-KWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            EL+  T +FS  + +GKGG+  VY+G L NG+ VA+K L   +G  D    DF++E+  M+   H N   LLG+  EG    I+ E   +GSL   +   K         Y IALG+A GL YLH GC+ RI+H      NILL ++F
Sbjct:  490 ELKKITKSFS--HTVGKGGFGTVYRGNLSNGRTVAVKVLKDLKGNGD----DFINEVTSMSQTSHVNIVSLLGFCYEGSKRAIISEFLEHGSLDQFISRNKSLTPNVTTLYGIALGIARGLEYLHYGCKTRIVHFDIKPQNILLDDNF 631          
The following BLAST results are available for this feature:
BLAST of FC929615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 256
Match NameE-valueIdentityDescription
Y5182_ARATH9.803e-1835.76Probable LRR receptor-like serine/threonine-protei... [more]
NAK_ARATH9.803e-1835.37Probable serine/threonine-protein kinase NAK OS=Ar... [more]
Y2393_ARATH1.280e-1738.41Probable receptor-like protein kinase At2g39360 OS... [more]
Y2232_ARATH1.280e-1740.69Probable receptor-like protein kinase At2g23200 OS... [more]
Y1105_ARATH1.280e-1737.18Probable receptor-like protein kinase At1g11050 OS... [more]
WAK1_ARATH1.280e-1737.58Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]
SRF2_ARATH1.280e-1738.16Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsi... [more]
LRKA2_ARATH1.280e-1732.67Lectin-domain containing receptor kinase A4.2 OS=A... [more]
LRKA1_ARATH1.280e-1733.79Lectin-domain containing receptor kinase A4.1 OS=A... [more]
Y5392_ARATH1.672e-1739.86Probable receptor-like protein kinase At5g39020 OS... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2DD12RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2DD12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929615 ID=FC929615; Name=FC929615; organism=Citrus clementina; type=EST; length=850bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAAT
CATTCATAGGAGATATTAAGCTGCCAATATTTTGCTCACTGAGGACTTCG
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