FC929615

Overview
NameFC929615
Unique NameFC929615
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length850
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15029 contig Ccv1_Contig15029:1..850. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.237e-20
Identity = 62/154 (40.26%), Postives = 91/154 (59.09%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNG-QLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLLY----GMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            FS+YE++SATN+F  + +IG GG+  VYKGR+  G  LVA+KRL   T+++   +F +EL +++ + H +   L+GY   +  M +V E  P+G+L   L+         L W  R +I +G A GL YLH G +  IIHR     NILL E+F
Sbjct:  513 FSIYEIKSATNDFEEKLIIGVGGFGSVYKGRIDGGATLVAVKRL-EITSNQGAKEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRRDKASDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENF 665          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.616e-20
Identity = 65/154 (42.21%), Postives = 89/154 (57.79%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLLYGMK---EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            K F+  ELQ AT+NFS +N++G+GG+ +VYKG L +   VA+KRLT   +    A F  E+ +++   H N  +L+G+   +    +V     N SLA  L  +K     L W  R +IALG A G  YLHE C  +IIHR   AAN+LL EDF
Sbjct:  276 KRFAWRELQLATDNFSEKNVLGQGGFGKVYKGVLPDNTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSLAHRLREIKAGDPVLDWETRKRIALGAARGFEYLHEHCNPKIIHRDVKAANVLLDEDF 429          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.616e-20
Identity = 64/181 (35.36%), Postives = 98/181 (54.14%), Query Frame = 1
Query:  319 RRSSSMREGIDMP-RNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGM--KEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            ++ S++ +G+ +P R   V+   S    K F+  E+   T NF  + ++GKGG+  VY G ++  + VA+K L++ +      +F +E+ ++  V H N   L+GY  EG  + +V E  PNG L   L G      + W IR +IAL  A GL YLH GC   ++HR    ANILL E+F
Sbjct:  524 KKMSTIVKGLRLPPRTSMVDVTFSNKKSKRFTYSEVVQVTKNF--QRVLGKGGFGMVYHGTVKGSEQVAVKVLSQSSTQGS-KEFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSGKGGNSIINWSIRLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLDENF 701          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.616e-20
Identity = 58/150 (38.67%), Postives = 90/150 (60.00%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKE-KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            FSL E++  T+NF   N+IG GG+ +VYKG +  G  VAIK+ +   +++ + +F +E+ +++ + H +   L+GY  EGG M ++ +    G+L   LY  K  +L W  R +IA+G A GL YLH G +  IIHR     NILL E++
Sbjct:  509 FSLSEIKHGTHNFDESNVIGVGGFGKVYKGVIDGGTKVAIKK-SNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLIYDYMSLGTLREHLYNTKRPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENW 657          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: ACCR1_ARATH (Serine/threonine-protein kinase-like protein CCR1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.616e-20
Identity = 59/152 (38.82%), Postives = 85/152 (55.92%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEI-IADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            ++F L EL+ ATN F   N +G+G Y  VYK  L +G+ VA+KR    T       +F +EL I+ ++ H N   LLGY  E G  + V E  P+G+L   L+     L W +R KIA+  A+GL YLH   + RIIH    ++N+LL  ++
Sbjct:  506 QVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLADGRQVAVKRANAATIIHTNTREFETELEILCNIRHCNIVNLLGYSTEMGERLLVYEYMPHGTLHDHLHSGFSPLSWSLRIKIAMQTAKGLEYLHNEAEPRIIHGDVKSSNVLLDSEW 657          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.600e-20
Identity = 61/157 (38.85%), Postives = 87/157 (55.41%), Query Frame = 1
Query:  403 IFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIV-LELSPNGSLASLLYGMK--------EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTED 846
            I    EL+ AT++F   +LIG+G Y  VY G L N    AIK+L      +   +FL+++ +++ + H N  +LLGY ++G   I+  E + NGSL  +L+G K          L W  R KIA+G A GL YLHE     IIHR   ++N+LL ED
Sbjct:   60 IIPFSELKEATDDFGSNSLIGEGSYGRVYYGVLNNDLPSAIKKLDSNKQPD--NEFLAQVSMVSRLKHDNFVQLLGYCVDGNSRILSYEFANNGSLHDILHGRKGVKGAQPGPVLSWYQRVKIAVGAARGLEYLHEKANPHIIHRDIKSSNVLLFED 214          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.600e-20
Identity = 59/142 (41.55%), Postives = 89/142 (62.68%), Query Frame = 1
Query:  421 LQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILL 837
            +++ATNNFS    +G GG   V+KGRL +G+ +A+KRL+  T ++   +F +E+ ++A + H N  +LLG+ ++G   I++ E  PN SL  +L+   ++  L W  RYKI  G A G+LYLH+  Q  IIHR   A NILL
Sbjct:  353 IETATNNFS--ERLGHGGSGHVFKGRLPDGKEIAVKRLSEKT-EQSKKEFKNEVVLVAKLQHRNLVRLLGFSVKGEEKIIVYEYLPNRSLDYILFDPTKQGELDWKKRYKIIGGTARGILYLHQDSQPTIIHRDLKAGNILL 491          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.701e-20
Identity = 61/154 (39.61%), Postives = 92/154 (59.74%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNG-QLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKE----KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            FS++E++SATN+F  + +IG GG+  VYKG++  G  LVA+KRL   T+++   +F +EL +++ + H +   L+GY  E   M +V E  P+G+L   L+   +     L W  R +I +G A GL YLH G +  IIHR     NILL E+F
Sbjct:  506 FSIFEIKSATNDFEDKLIIGVGGFGSVYKGQIDGGATLVAVKRL-EITSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENF 658          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.701e-20
Identity = 59/185 (31.89%), Postives = 103/185 (55.68%), Query Frame = 1
Query:  307 KLSIRRSSSMREGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            KL+ ++    R G  + +   +++        +FS  EL+ AT NFS   ++G+GG   VYKG L +G++VA+K+ ++   ++ + +F++E+ I++ ++H N  KLLG  +E  + + V E  PNG+L   L+   ++     W IR +IA+ +A  L YLH      I HR   + NI+L E +
Sbjct:  402 KLNQKKKFFKRNGGLLLQQQLISTVGMVEKTIVFSSRELEKATENFSSNRILGQGGQGTVYKGMLVDGRIVAVKK-SKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETKVPVLVYEFIPNGNLFEHLHDEFDENIMATWNIRLRIAIDIAGALSYLHSSASSPIYHRDVKSTNIMLDEKY 585          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20
Identity = 59/151 (39.07%), Postives = 84/151 (55.63%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIE-GGMHIVLELSPNGSLASLLYGMK-EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTED 846
            + F   E+  ATN F   +L+G GG+  VYKG L +G  VA+KR     +++ +A+F +E+ +++ + H +   L+GY  E   M +V E   NG L S LYG     L W  R +I +G A GL YLH G  + IIHR     NILL E+
Sbjct:  496 RCFMFQEIMDATNKFDESSLLGVGGFGRVYKGTLEDGTKVAVKR-GNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDEN 645          
The following BLAST results are available for this feature:
BLAST of FC929615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 256
Match NameE-valueIdentityDescription
Y5389_ARATH1.237e-2040.26Probable receptor-like protein kinase At5g38990 OS... [more]
Y5129_ARATH1.616e-2042.21Probable LRR receptor-like serine/threonine-protei... [more]
RLK7_ARATH1.616e-2035.36Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
ANX2_ARATH1.616e-2038.67Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]
ACCR1_ARATH1.616e-2038.82Serine/threonine-protein kinase-like protein CCR1 ... [more]
Y2706_ARATH3.600e-2038.85Probable receptor-like protein kinase At2g47060 OS... [more]
CRK13_ARATH3.600e-2041.55Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
Y5900_ARATH4.701e-2039.61Putative receptor-like protein kinase At5g39000 OS... [more]
WAKLH_ARATH4.701e-2031.89Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
THE1_ARATH6.140e-2039.07Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAH2DD12RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2DD12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929615 ID=FC929615; Name=FC929615; organism=Citrus clementina; type=EST; length=850bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAAT
CATTCATAGGAGATATTAAGCTGCCAATATTTTGCTCACTGAGGACTTCG
back to top