FC929618

Overview
NameFC929618
Unique NameFC929618
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length741
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15007 contig Ccv1_Contig15007:1..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKB1A_NEUCR (Peptidyl-prolyl cis-trans isomerase fkr-2 OS=Neurospora crassa GN=fkr-2 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.629e-24
Identity = 50/94 (53.19%), Postives = 66/94 (70.21%), Query Frame = 1
Query:  166 QAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNG 447
            +  +GD + VHY+G LT G  FD+S++RG+P+ F +G G VIKGWD+GLLGM +GEKRKL I   L YG +     IP  +TLIF+TELV + G
Sbjct:   22 ETRRGDNVDVHYKGVLTSGKKFDASYDRGEPLNFTVGQGQVIKGWDEGLLGMKIGEKRKLTIAPHLAYGNRAVGGIIPANSTLIFETELVGIKG 115          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP2_CANGA (FK506-binding protein 2 OS=Candida glabrata GN=FPR2 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.139e-23
Identity = 51/96 (53.12%), Postives = 67/96 (69.79%), Query Frame = 1
Query:  157 CDIQAHKGDKIKVHYRGKLTD-GTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 441
            C ++A  GD + VHY G L + G VFDSS  R +PI+F+LG+G VI GW+QG+ GMC+GEKR L IP +L YG++G+   IP  A L FD ELV +
Sbjct:   38 CKLKALPGDMVSVHYTGSLAENGKVFDSSLRRNEPIQFKLGAGQVIAGWEQGITGMCLGEKRTLHIPPELAYGSRGAGGVIPPNAVLDFDVELVDI 133          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKB70_ARATH (70 kDa peptidyl-prolyl isomerase OS=Arabidopsis thaliana GN=ROF1 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 8.988e-22
Identity = 50/86 (58.14%), Postives = 58/86 (67.44%), Query Frame = 1
Query:  178 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELV 435
            GD+++VHY G L DGT FDSS +R  P +F LG G VIKGWD G+  M  GE     IPA+L YG  GSPPTIP  ATL FD EL+
Sbjct:   57 GDEVEVHYTGTLLDGTKFDSSRDRATPFKFTLGQGQVIKGWDIGIKTMKKGENAVFTIPAELAYGESGSPPTIPANATLQFDVELL 142          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP_NEIMC (FK506-binding protein OS=Neisseria meningitidis serogroup C GN=fbp PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.533e-21
Identity = 52/92 (56.52%), Postives = 63/92 (68.48%), Query Frame = 1
Query:  166 QAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 441
            +A KG +I VHY G L DGT FDSS +R  P+   LG G VIKGWD+G  GM  G KRKL IP+++GYGA G+   IP  ATLIF+ EL+ V
Sbjct:   16 EAVKGKEITVHYTGWLEDGTKFDSSLDRRQPLTITLGVGQVIKGWDEGFGGMKEGGKRKLTIPSEMGYGAHGAGGVIPPHATLIFEVELLKV 107          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKB70_WHEAT (70 kDa peptidyl-prolyl isomerase OS=Triticum aestivum GN=FKBP70 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.533e-21
Identity = 49/87 (56.32%), Postives = 59/87 (67.82%), Query Frame = 1
Query:  178 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVT 438
            GD+++VHY G L DG  FDSS +R D  +F+LG G VIKGWDQG+  M  GE     IP +L YG  GSPPTIP  ATL FD EL++
Sbjct:   60 GDEVEVHYTGTLLDGKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKTMKKGENALFTIPPELAYGESGSPPTIPANATLQFDVELLS 146          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP9_RAT (FK506-binding protein 9 OS=Rattus norvegicus GN=Fkbp9 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.615e-21
Identity = 44/99 (44.44%), Postives = 68/99 (68.69%), Query Frame = 1
Query:  139 KYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELV 435
            K  P++C+ ++  GD ++ HY G L DGT+FDSS+ R    +  +G G+VI G D+GLLG+C+GE+R++ +P  LGYG +G   +IPG A L+FD  ++
Sbjct:  265 KVVPESCERRSQSGDFLRYHYNGTLLDGTLFDSSYSRNHTFDTYIGQGYVIPGMDEGLLGVCIGERRRIVVPPHLGYGEEGR-GSIPGSAVLVFDIHVI 362          

HSP 2 Score: 100.138 bits (248), Expect = 1.298e-20
Identity = 50/105 (47.62%), Postives = 62/105 (59.05%), Query Frame = 1
Query:  142 YKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELV-TVNGKP 453
            YKP  C + + KGD +K HY   L DGT+ DS++  G      LG G V+ G D GL  MCVGEKR + IP  LGYG  G    +PG A L+FD EL+  V+G P
Sbjct:  377 YKPPDCSVLSKKGDYLKYHYNASLLDGTLLDSTWNLGKTYNIVLGFGQVVLGMDMGLREMCVGEKRTVIIPPHLGYGEAGVDGEVPGSAVLVFDIELLELVSGLP 481          

HSP 3 Score: 92.8189 bits (229), Expect = 2.072e-18
Identity = 45/101 (44.55%), Postives = 61/101 (60.40%), Query Frame = 1
Query:  142 YKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVN 444
            +KP +C       D ++ HY G   DGT+FDSS  R    +  +G G +I G D+GLLGMCVGEKR + IP  L YG +G    IPG A+L+FD  L+ ++
Sbjct:  154 FKPPSCPRTIQVSDFVRYHYNGTFLDGTLFDSSHNRMKTYDTYVGIGWLIPGMDKGLLGMCVGEKRIITIPPFLAYGEEGDGKDIPGQASLVFDVALLDLH 254          

HSP 4 Score: 83.1889 bits (204), Expect = 1.642e-15
Identity = 40/100 (40.00%), Postives = 54/100 (54.00%), Query Frame = 1
Query:  142 YKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 441
            + P  C      GD ++ HY G   DG  FDSS++R       +G G +I G DQ L+GMCV E+R + IP  L YG++G    IP  + L FD  LV +
Sbjct:   42 FVPDECPRTVRSGDFVRYHYVGTFLDGQKFDSSYDRDSTFSVFVGKGQLIAGMDQALVGMCVNERRFVTIPPNLAYGSEGVSGVIPPNSVLHFDVLLVDI 141          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP9_MOUSE (FK506-binding protein 9 OS=Mus musculus GN=Fkbp9 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.615e-21
Identity = 51/105 (48.57%), Postives = 63/105 (60.00%), Query Frame = 1
Query:  142 YKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELV-TVNGKP 453
            YKP  C + + KGD +K HY   L DGT+ DS++  G      LGSG V+ G D GL  MCVGEKR + IP  LGYG  G    +PG A L+FD EL+  V+G P
Sbjct:  377 YKPPDCSVLSKKGDYLKYHYNASLLDGTLLDSTWNLGKTYNIVLGSGQVVLGMDMGLREMCVGEKRTVIIPPHLGYGEAGVDGEVPGSAVLVFDIELLELVSGLP 481          

HSP 2 Score: 101.679 bits (252), Expect = 4.460e-21
Identity = 44/99 (44.44%), Postives = 67/99 (67.68%), Query Frame = 1
Query:  139 KYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELV 435
            K  P+ C+ ++  GD ++ HY G L DGT+FDSS+ R    +  +G G+VI G D+GLLG+C+GE+R++ +P  LGYG +G   +IPG A L+FD  ++
Sbjct:  265 KVVPENCERRSQSGDFLRYHYNGTLLDGTLFDSSYSRNHTFDTYIGQGYVIPGMDEGLLGVCIGERRRIVVPPHLGYGEKGR-GSIPGSAVLVFDIHVI 362          

HSP 3 Score: 92.4337 bits (228), Expect = 2.706e-18
Identity = 44/101 (43.56%), Postives = 61/101 (60.40%), Query Frame = 1
Query:  142 YKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVN 444
            +KP +C       D ++ HY G   DGT+FDSS  R    +  +G G +I G D+GLLGMCVGEKR + +P  L YG +G    IPG A+L+FD  L+ ++
Sbjct:  154 FKPPSCPRTIQVSDFVRYHYNGTFLDGTLFDSSHNRMKTYDTYVGIGWLIPGMDKGLLGMCVGEKRIITVPPFLAYGEEGDGKDIPGQASLVFDVALLDLH 254          

HSP 4 Score: 86.6557 bits (213), Expect = 1.485e-16
Identity = 41/100 (41.00%), Postives = 55/100 (55.00%), Query Frame = 1
Query:  142 YKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 441
            + P  C    H GD ++ HY G   DG  FDSS++R       +G G +I G DQ L+GMCV E+R + IP  L YG++G    IP  + L FD  LV +
Sbjct:   42 FVPDECPRTVHSGDFVRYHYVGTFLDGQKFDSSYDRDSTFNVFVGKGQLIAGMDQALVGMCVNERRLVTIPPNLAYGSEGVSGVIPPNSVLHFDVLLVDI 141          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP1_DICDI (FK506-binding protein 1 OS=Dictyostelium discoideum GN=fkbp1 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.615e-21
Identity = 48/87 (55.17%), Postives = 61/87 (70.11%), Query Frame = 1
Query:  178 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVT 438
            G  + VH+ G LT+GTVFDSS +RG P  F+LG+G VIKGWD+G+  M VGE  KL I    GYGA+G+   IP  ATL+F+ EL+T
Sbjct:   19 GSNVTVHHAGTLTNGTVFDSSRKRGQPFNFKLGAGQVIKGWDEGVAKMKVGETSKLTISPDFGYGARGAGGVIPPNATLVFEVELIT 105          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP_NEIMA (FK506-binding protein OS=Neisseria meningitidis serogroup A GN=fbp PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.460e-21
Identity = 51/92 (55.43%), Postives = 64/92 (69.57%), Query Frame = 1
Query:  166 QAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 441
            +A KG +I VHY G L +GT FDSS +R  P+   LG G VIKGWD+G  GM  G KRKL IP+++GYGA+G+   IP  ATLIF+ EL+ V
Sbjct:   16 EAVKGKEITVHYTGWLENGTKFDSSLDRRQPLTITLGVGQVIKGWDEGFGGMKEGGKRKLTIPSEMGYGARGAGGVIPPHATLIFEVELLKV 107          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP_NEIMB (FK506-binding protein OS=Neisseria meningitidis serogroup B GN=fbp PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.826e-21
Identity = 51/92 (55.43%), Postives = 63/92 (68.48%), Query Frame = 1
Query:  166 QAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 441
            +A KG +I VHY G L +GT FDSS +R  P+   LG G VIKGWD+G  GM  G KRKL IP+++GYGA G+   IP  ATLIF+ EL+ V
Sbjct:   16 EAVKGKEITVHYTGWLENGTKFDSSLDRRQPLTITLGVGQVIKGWDEGFGGMKEGGKRKLTIPSEMGYGAHGAGGVIPPHATLIFEVELLKV 107          
The following BLAST results are available for this feature:
BLAST of FC929618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
FKB1A_NEUCR5.629e-2453.19Peptidyl-prolyl cis-trans isomerase fkr-2 OS=Neuro... [more]
FKBP2_CANGA2.139e-2353.13FK506-binding protein 2 OS=Candida glabrata GN=FPR... [more]
FKB70_ARATH8.988e-2258.1470 kDa peptidyl-prolyl isomerase OS=Arabidopsis th... [more]
FKBP_NEIMC1.533e-2156.52FK506-binding protein OS=Neisseria meningitidis se... [more]
FKB70_WHEAT1.533e-2156.3270 kDa peptidyl-prolyl isomerase OS=Triticum aesti... [more]
FKBP9_RAT2.615e-2144.44FK506-binding protein 9 OS=Rattus norvegicus GN=Fk... [more]
FKBP9_MOUSE2.615e-2148.57FK506-binding protein 9 OS=Mus musculus GN=Fkbp9 P... [more]
FKBP1_DICDI2.615e-2155.17FK506-binding protein 1 OS=Dictyostelium discoideu... [more]
FKBP_NEIMA4.460e-2155.43FK506-binding protein OS=Neisseria meningitidis se... [more]
FKBP_NEIMB5.826e-2155.43FK506-binding protein OS=Neisseria meningitidis se... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1AG03RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1AG03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929618 ID=FC929618; Name=FC929618; organism=Citrus clementina; type=EST; length=741bp
GACAAACAGAGAGAATTGTGAAGATGAGTTTCAACTCAGTATTGAATATC
GCCGCTGCAATTTCGTTCCTTTTGGTTCTTTCGACGTTAGTTTCTGCTAA
CAAGTCAGGCGATGTAACAGAGTTACAGATTCGGCGTAAAGTACAAGCCA
AAAACCTGTGACATTCAGGCTCACAAAGGTGATAAAATCAAAGTACATTA
CCGGGGAAAACTGACTGATGGAACTGTTTTTGATTCCAGTTTTGAAAGAG
GTGATCCCATTGAATTTGAGCTTGGCAGCGGTCATGTAATCAAAGGATGG
GACCAAGGACTTTTGGGAATGTGCGTCGGTGAGAAGCGAAAGTTGAAAAT
TCCTGCAAAGCTTGGTTATGGGGCCCAGGGTTCTCCCCCTACCATCCCAG
GTGGAGCAACATTGATCTTTGACACCGAGCTTGTAACAGTAAATGGGAAA
CCAGCAAGCGGAGAGAAAACTGAAGATGAGCTATGATTACCTCTCGATTG
AGCAGATTTACCTAAGTCATTCCTGTTGCTTTTAATGTATCGGCATAAAC
CAGGTTTCATAGGCCAGAATAATTTATCTATTTAGTGACCTACAGCTGAA
CAATTTTTGTTGTTTGGATCAGAAGAAATCTTTTTAAGGGGACAAAATAT
TAATCTCTGAATATTCGGAAGGTTGGTTGCCTCGCTCTTAAGTGATGCGA
ACATAGCATTATTAGATTTTTCGCANAAAAAAAAAAAAAAA
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