FC929618

Overview
NameFC929618
Unique NameFC929618
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length741
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP3_ARATH (FKBP-type peptidyl-prolyl cis-trans isomerase 3, chloroplastic OS=Arabidopsis thaliana GN=FKBP13 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.072e-18
Identity = 49/101 (48.51%), Postives = 61/101 (60.40%), Query Frame = 1
Query:  166 QAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLG------MCVGEKRKLKIPAKLGY-----GAQGSPPTIPGGATLIFDTELV 435
            +A KG  IK HY GKL +G VFDSS+ RG P+ F +G G VIKGWDQG+LG      M  G KR L+IP +L Y     G +G    IP  + L+FD E +
Sbjct:  105 EAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYI 205          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP1_RHIOR (FK506-binding protein 1 OS=Rhizopus oryzae GN=FKBP1 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.072e-18
Identity = 42/90 (46.67%), Postives = 58/90 (64.44%), Query Frame = 1
Query:  175 KGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVN 444
            KGD + +HY G L +G+VFDSS  R +P   ++G G VIKGWD+G+L + +G+K  L       YG +G PP IP  ATL F+ EL+ +N
Sbjct:   19 KGDTVTMHYTGTLQNGSVFDSSVRRNEPFVTQIGVGRVIKGWDEGVLQLSLGQKANLICTPDYAYGPRGFPPVIPPNATLNFEVELLKIN 108          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBY_HAEIN (Probable FKBP-type peptidyl-prolyl cis-trans isomerase OS=Haemophilus influenzae GN=HI0574 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.706e-18
Identity = 48/90 (53.33%), Postives = 61/90 (67.78%), Query Frame = 1
Query:  181 DKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGK 450
            D +KVHY GKL +G VFDSS ERG P+EF+L    VIKGW +GL  +  G K +  I  +LGYG QG+  +IP  +TLIFD E++ VN K
Sbjct:  151 DTVKVHYTGKLPNGKVFDSSVERGQPVEFQLDQ--VIKGWTEGLQLVKKGGKIQFVIAPELGYGEQGAGASIPPNSTLIFDVEVLDVNPK 238          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP_YARLI (FK506-binding protein 1 OS=Yarrowia lipolytica GN=FPR1 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.534e-18
Identity = 42/90 (46.67%), Postives = 59/90 (65.56%), Query Frame = 1
Query:  175 KGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVN 444
            KGD + +HY G L +G  FDSS +RG+P +  +G G VI+GWD+G+  + +GE+  L I    GYG +G P  IP  ATL+FD EL+ +N
Sbjct:   19 KGDAVTIHYVGTLENGQKFDSSRDRGEPFKTTIGVGDVIRGWDEGVPKLSLGERSVLTISGDYGYGERGFPGLIPPNATLVFDVELLGIN 108          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP4_RABIT (FK506-binding protein 4 OS=Oryctolagus cuniculus GN=FKBP4 PE=1 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 3.534e-18
Identity = 44/97 (45.36%), Postives = 59/97 (60.82%), Query Frame = 1
Query:  178 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGKPASGEK 468
            GD++ VHY G L DGT FDSS +R D   F+LG G VIK WD  +  M VGE  ++    +  YG+ GSPP IP  ATL+F+ EL    G+  + ++
Sbjct:   50 GDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAVATMKVGELCRITCKPEYAYGSAGSPPKIPPNATLVFEVELFEFKGEDLTDDE 146          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP4_HUMAN (FK506-binding protein 4 OS=Homo sapiens GN=FKBP4 PE=1 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 3.534e-18
Identity = 45/97 (46.39%), Postives = 58/97 (59.79%), Query Frame = 1
Query:  178 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGKPASGEK 468
            GD++ VHY G L DGT FDSS +R D   F+LG G VIK WD  +  M VGE   +    +  YG+ GSPP IP  ATL+F+ EL    G+  + E+
Sbjct:   50 GDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEFKGEDLTEEE 146          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKB12_DROME (12 kDa FK506-binding protein OS=Drosophila melanogaster GN=FK506-bp2 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.616e-18
Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 1
Query:  178 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 441
            G K+ VHY G L DGT FDSS +R  P +F +G G VI+GWD+G+  + VG++ KL       YG++G P  IP  +TL FD EL+ V
Sbjct:   20 GQKVTVHYTGTLDDGTKFDSSRDRNKPFKFTIGKGEVIRGWDEGVAQLSVGQRAKLICSPDYAYGSRGHPGVIPPNSTLTFDVELLKV 107          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP4_NEUCR (FK506-binding protein 4 OS=Neurospora crassa GN=fpr-4 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.028e-18
Identity = 46/91 (50.55%), Postives = 64/91 (70.33%), Query Frame = 1
Query:  169 AHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 441
            A  GD++ + Y GKL +G VFDS+ ++G P  F+LG G VIKGWD G+ GM VG +R+L IPA L YG++ + P IP  +TLIFD +L+ +
Sbjct:  378 AKNGDRVGMRYIGKLQNGKVFDSN-KKGAPFSFKLGKGEVIKGWDIGVAGMAVGGERRLTIPAHLAYGSR-ALPGIPPNSTLIFDVKLLEI 466          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBA_AERHY (FKBP-type peptidyl-prolyl cis-trans isomerase fkpA OS=Aeromonas hydrophila GN=fkpA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.028e-18
Identity = 52/116 (44.83%), Postives = 66/116 (56.90%), Query Frame = 1
Query:  118 QSYRFGVKYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGKPASGE 465
            Q  + G   KPK  DI       +KVHY G LTDGT FDSS +RG+P  F L    VI GW +G+  M VG K K  +P+KL YG  G+  +IP  A L+FD EL+ +    A G+
Sbjct:  159 QVEKMGTGAKPKATDI-------VKVHYTGTLTDGTKFDSSVDRGEPATFPL--NQVIPGWTEGVQLMPVGSKFKFFLPSKLAYGEHGA-GSIPANAVLVFDVELLAIEKPAADGD 264          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP_DEBHA (FK506-binding protein 1 OS=Debaryomyces hansenii GN=FPR1 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.028e-17
Identity = 43/89 (48.31%), Postives = 55/89 (61.80%), Query Frame = 1
Query:  178 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVN 444
            GD + +HY G L +G  FDSS +RG P +  +G G VI GWD G+  + VG + KL IP    YG +G P  IP  ATL+FD EL+ VN
Sbjct:   24 GDLVTIHYTGTLENGKKFDSSRDRGKPFQCTIGVGQVIVGWDTGIPKLSVGSRAKLSIPGHEAYGDRGFPGLIPPNATLLFDVELLNVN 112          
The following BLAST results are available for this feature:
BLAST of FC929618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
FKBP3_ARATH2.072e-1848.51FKBP-type peptidyl-prolyl cis-trans isomerase 3, c... [more]
FKBP1_RHIOR2.072e-1846.67FK506-binding protein 1 OS=Rhizopus oryzae GN=FKBP... [more]
FKBY_HAEIN2.706e-1853.33Probable FKBP-type peptidyl-prolyl cis-trans isome... [more]
FKBP_YARLI3.534e-1846.67FK506-binding protein 1 OS=Yarrowia lipolytica GN=... [more]
FKBP4_RABIT3.534e-1845.36FK506-binding protein 4 OS=Oryctolagus cuniculus G... [more]
FKBP4_HUMAN3.534e-1846.39FK506-binding protein 4 OS=Homo sapiens GN=FKBP4 P... [more]
FKB12_DROME4.616e-1847.7312 kDa FK506-binding protein OS=Drosophila melanog... [more]
FKBP4_NEUCR6.028e-1850.55FK506-binding protein 4 OS=Neurospora crassa GN=fp... [more]
FKBA_AERHY6.028e-1844.83FKBP-type peptidyl-prolyl cis-trans isomerase fkpA... [more]
FKBP_DEBHA1.028e-1748.31FK506-binding protein 1 OS=Debaryomyces hansenii G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1AG03RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1AG03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929618 ID=FC929618; Name=FC929618; organism=Citrus clementina; type=EST; length=741bp
GACAAACAGAGAGAATTGTGAAGATGAGTTTCAACTCAGTATTGAATATC
GCCGCTGCAATTTCGTTCCTTTTGGTTCTTTCGACGTTAGTTTCTGCTAA
CAAGTCAGGCGATGTAACAGAGTTACAGATTCGGCGTAAAGTACAAGCCA
AAAACCTGTGACATTCAGGCTCACAAAGGTGATAAAATCAAAGTACATTA
CCGGGGAAAACTGACTGATGGAACTGTTTTTGATTCCAGTTTTGAAAGAG
GTGATCCCATTGAATTTGAGCTTGGCAGCGGTCATGTAATCAAAGGATGG
GACCAAGGACTTTTGGGAATGTGCGTCGGTGAGAAGCGAAAGTTGAAAAT
TCCTGCAAAGCTTGGTTATGGGGCCCAGGGTTCTCCCCCTACCATCCCAG
GTGGAGCAACATTGATCTTTGACACCGAGCTTGTAACAGTAAATGGGAAA
CCAGCAAGCGGAGAGAAAACTGAAGATGAGCTATGATTACCTCTCGATTG
AGCAGATTTACCTAAGTCATTCCTGTTGCTTTTAATGTATCGGCATAAAC
CAGGTTTCATAGGCCAGAATAATTTATCTATTTAGTGACCTACAGCTGAA
CAATTTTTGTTGTTTGGATCAGAAGAAATCTTTTTAAGGGGACAAAATAT
TAATCTCTGAATATTCGGAAGGTTGGTTGCCTCGCTCTTAAGTGATGCGA
ACATAGCATTATTAGATTTTTCGCANAAAAAAAAAAAAAAA
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