FC929618

Overview
NameFC929618
Unique NameFC929618
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length741
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15007 contig Ccv1_Contig15007:1..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP7_MOUSE (FK506-binding protein 7 OS=Mus musculus GN=Fkbp7 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.625e-16
Identity = 51/126 (40.48%), Postives = 68/126 (53.97%), Query Frame = 1
Query:  100 TSQAM*QSYRFGVKYKPKTCDIQAHKGDKIKVHYRGKLT-DGTVFDSSF--ERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQG-SPPTIPGGATLIFDTELVTVNGKPASGE 465
            T +   +  +  V ++P+ C   + KGD +  HY G L  DG+ F  S   + G P  F LG GHVIKG D  ++ MC GEKRK+ IP    YG +G +   IP  ATL+F+ EL  V   P S E
Sbjct:   23 TKEESTEEVKIEVLHRPENCSKTSRKGDLLNAHYDGYLAKDGSKFYCSRTQDEGHPKWFVLGVGHVIKGLDIAMMDMCPGEKRKVIIPPSFAYGKEGYAEGKIPPNATLMFEIELYAVTKGPRSIE 148          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP4_YEAST (FK506-binding protein 4 OS=Saccharomyces cerevisiae GN=FPR4 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.642e-15
Identity = 43/91 (47.25%), Postives = 59/91 (64.84%), Query Frame = 1
Query:  169 AHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 441
            A KG ++ + Y GKL +G VFD +  +G P  F+LG G VIKGWD G+ GM VG +R++ IPA   YG Q + P IP  + L FD +LV++
Sbjct:  303 AKKGTRVGMRYVGKLKNGKVFDKN-TKGKPFVFKLGQGEVIKGWDIGVAGMAVGGERRIVIPAPYAYGKQ-ALPGIPANSELTFDVKLVSM 391          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP4_SCHPO (FK506-binding protein 39 kDa OS=Schizosaccharomyces pombe GN=fkbp39 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.642e-15
Identity = 44/92 (47.83%), Postives = 60/92 (65.22%), Query Frame = 1
Query:  169 AHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVN 444
            A  G K+++ Y GKL +G VFD +  +G P  F LG G VI+GWD G+ GM  G +RK+ IPA + YG Q S P IP  +TL+F+ +LV V+
Sbjct:  272 ATNGKKVEMRYIGKLENGKVFDKN-TKGKPFAFILGRGEVIRGWDVGVAGMQEGGERKITIPAPMAYGNQ-SIPGIPKNSTLVFEVKLVRVH 361          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBA_BUCBP (FKBP-type peptidyl-prolyl cis-trans isomerase fkpA OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=fkpA PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.642e-15
Identity = 45/93 (48.39%), Postives = 57/93 (61.29%), Query Frame = 1
Query:  172 HKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGK 450
            H  D I VHY+G L +G  FD+S++RG P+ F L S  VI GW +GL  +  G   KL IP KL YG  G  P IPG +TLIF+ EL+ +  K
Sbjct:  162 HDSDVITVHYKGSLINGNEFDNSYKRGQPLSFSLDS--VIPGWIEGLKYIKKGGLIKLVIPPKLAYGETG-VPGIPGNSTLIFEIELIDIQSK 251          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP5_MOUSE (FK506-binding protein 5 OS=Mus musculus GN=Fkbp5 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.657e-15
Identity = 42/91 (46.15%), Postives = 52/91 (57.14%), Query Frame = 1
Query:  178 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGK 450
            GDK+ VHY+G L+DG  FDSS +R  P  F LG G VIK WD G+  M  GE   L    +  YG+ G    IP  ATL F+ EL+   G+
Sbjct:   50 GDKVYVHYKGMLSDGKKFDSSHDRKKPFAFSLGQGQVIKAWDIGVSTMKKGEICHLLCKPEYAYGSAGHLQKIPSNATLFFEIELLDFKGE 140          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP3_KLULA (FK506-binding protein 3 OS=Kluyveromyces lactis GN=FPR3 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.657e-15
Identity = 46/99 (46.46%), Postives = 59/99 (59.60%), Query Frame = 1
Query:  145 KPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 441
            K K C     KG K+ + Y GKL +G VFD +   G P  F LG G VIKGWD G+ GM VG +R++ IPA   YG Q + P IP  + L FD +LV++
Sbjct:  325 KGKACK----KGSKVGMRYIGKLKNGKVFDKNTS-GKPFVFNLGRGEVIKGWDIGVAGMAVGGERRIVIPAPYAYGKQ-ALPGIPANSELTFDVKLVSL 417          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP4_SPOFR (46 kDa FK506-binding nuclear protein OS=Spodoptera frugiperda GN=FKBP46 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.777e-15
Identity = 39/91 (42.86%), Postives = 53/91 (58.24%), Query Frame = 1
Query:  169 AHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 441
            A  G  + V+Y G+L        +  +G   +F LGS  VI GWD G+ GM VG KRK+  P  + YGA+GSPP IP  +TL+F+ +L  V
Sbjct:  321 AKAGKVVMVYYEGRLKQNNKMFDNCVKGPGFKFRLGSKEVISGWDVGIAGMKVGGKRKIVCPPAMAYGAKGSPPVIPPNSTLVFEVDLKNV 411          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP3_YEAST (FK506-binding nuclear protein OS=Saccharomyces cerevisiae GN=FPR3 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.777e-15
Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = 1
Query:  166 QAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 441
            QA +G ++ + Y GKL +G VFD +   G P  F+LG G VIKGWD G+ GM VG +R++ IPA   YG Q + P IP  + L FD +LV++
Sbjct:  320 QAKRGARVGMRYIGKLKNGKVFDKNTS-GKPFAFKLGRGEVIKGWDIGVAGMSVGGERRIIIPAPYAYGKQ-ALPGIPANSELTFDVKLVSM 409          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKB1B_HUMAN (Peptidyl-prolyl cis-trans isomerase FKBP1B OS=Homo sapiens GN=FKBP1B PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.777e-15
Identity = 40/89 (44.94%), Postives = 53/89 (59.55%), Query Frame = 1
Query:  175 KGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 441
            KG    VHY G L +G  FDSS +R  P +F +G   VIKG+++G   M +G++ KL     + YGA G P  IP  ATLIFD EL+ +
Sbjct:   19 KGQTCVVHYTGMLQNGKKFDSSRDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNL 107          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKB1B_BOVIN (Peptidyl-prolyl cis-trans isomerase FKBP1B OS=Bos taurus GN=FKBP1B PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.777e-15
Identity = 40/89 (44.94%), Postives = 53/89 (59.55%), Query Frame = 1
Query:  175 KGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 441
            KG    VHY G L +G  FDSS +R  P +F +G   VIKG+++G   M +G++ KL     + YGA G P  IP  ATLIFD EL+ +
Sbjct:   19 KGQTCVVHYTGMLQNGKKFDSSRDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNL 107          
The following BLAST results are available for this feature:
BLAST of FC929618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
FKBP7_MOUSE9.625e-1640.48FK506-binding protein 7 OS=Mus musculus GN=Fkbp7 P... [more]
FKBP4_YEAST1.642e-1547.25FK506-binding protein 4 OS=Saccharomyces cerevisia... [more]
FKBP4_SCHPO1.642e-1547.83FK506-binding protein 39 kDa OS=Schizosaccharomyce... [more]
FKBA_BUCBP1.642e-1548.39FKBP-type peptidyl-prolyl cis-trans isomerase fkpA... [more]
FKBP5_MOUSE3.657e-1546.15FK506-binding protein 5 OS=Mus musculus GN=Fkbp5 P... [more]
FKBP3_KLULA3.657e-1546.46FK506-binding protein 3 OS=Kluyveromyces lactis GN... [more]
FKBP4_SPOFR4.777e-1542.8646 kDa FK506-binding nuclear protein OS=Spodoptera... [more]
FKBP3_YEAST4.777e-1546.74FK506-binding nuclear protein OS=Saccharomyces cer... [more]
FKB1B_HUMAN4.777e-1544.94Peptidyl-prolyl cis-trans isomerase FKBP1B OS=Homo... [more]
FKB1B_BOVIN4.777e-1544.94Peptidyl-prolyl cis-trans isomerase FKBP1B OS=Bos ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1AG03RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1AG03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929618 ID=FC929618; Name=FC929618; organism=Citrus clementina; type=EST; length=741bp
GACAAACAGAGAGAATTGTGAAGATGAGTTTCAACTCAGTATTGAATATC
GCCGCTGCAATTTCGTTCCTTTTGGTTCTTTCGACGTTAGTTTCTGCTAA
CAAGTCAGGCGATGTAACAGAGTTACAGATTCGGCGTAAAGTACAAGCCA
AAAACCTGTGACATTCAGGCTCACAAAGGTGATAAAATCAAAGTACATTA
CCGGGGAAAACTGACTGATGGAACTGTTTTTGATTCCAGTTTTGAAAGAG
GTGATCCCATTGAATTTGAGCTTGGCAGCGGTCATGTAATCAAAGGATGG
GACCAAGGACTTTTGGGAATGTGCGTCGGTGAGAAGCGAAAGTTGAAAAT
TCCTGCAAAGCTTGGTTATGGGGCCCAGGGTTCTCCCCCTACCATCCCAG
GTGGAGCAACATTGATCTTTGACACCGAGCTTGTAACAGTAAATGGGAAA
CCAGCAAGCGGAGAGAAAACTGAAGATGAGCTATGATTACCTCTCGATTG
AGCAGATTTACCTAAGTCATTCCTGTTGCTTTTAATGTATCGGCATAAAC
CAGGTTTCATAGGCCAGAATAATTTATCTATTTAGTGACCTACAGCTGAA
CAATTTTTGTTGTTTGGATCAGAAGAAATCTTTTTAAGGGGACAAAATAT
TAATCTCTGAATATTCGGAAGGTTGGTTGCCTCGCTCTTAAGTGATGCGA
ACATAGCATTATTAGATTTTTCGCANAAAAAAAAAAAAAAA
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