FC929619
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929619 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 4.726e-26 Identity = 46/94 (48.94%), Postives = 69/94 (73.40%), Query Frame = 2 Query: 17 LSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 298 ++F++A+WFWMT + KPSCH+V++ E++P DV A R G+GL TNI+NGG+EC + G+A V NRIGF+ +C G+ G +LDC +Q+P+ Sbjct: 197 IAFQTALWFWMTPRDTKPSCHQVMVGEYRPGPADVAANRTAGFGLVTNIVNGGLECNRAGDARVNNRIGFYRRYCQVLGVDVGPNLDCEHQQPF 290
BLAST of FC929619 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.796e-25 Identity = 50/98 (51.02%), Postives = 68/98 (69.39%), Query Frame = 2 Query: 5 TDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 298 +D + FK+A+WFWMT Q PKPS H+VI W PS+ D AGR+PGYG+ TNII+GG+ECG+G + V +RIG++ D+LDCYNQ+P+ Sbjct: 113 SDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVECGKGQESHVADRIGYYK-----------DNLDCYNQKPF 199
BLAST of FC929619 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.520e-24 Identity = 50/100 (50.00%), Postives = 64/100 (64.00%), Query Frame = 2 Query: 2 ATDPVLSFKSAIWFWMTAQPP-KPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 298 ATDPVLSF++A+WFWM PSCHEVI EW PS D+ AGR PG+G+ TNII G EC + G +NRI ++ +C + PGD+L C NQ + Sbjct: 205 ATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYYLRYCDMLQVDPGDNLYCDNQETF 304
BLAST of FC929619 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 2.593e-24 Identity = 49/108 (45.37%), Postives = 72/108 (66.67%), Query Frame = 2 Query: 2 ATDPVLSFKSAIWFWMTAQPP-KPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYGLNLMAQS 322 ATDP ++FK+A+W WMTA+ P +PS H V+ +W P+ D AGR PGYGLTTNI+ GG++C G A +R+ F+ +C G+ G +LDC+ Q P+ ++M+ S Sbjct: 232 ATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA--DRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGDIMSAS 337
BLAST of FC929619 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 3.387e-24 Identity = 49/108 (45.37%), Postives = 71/108 (65.74%), Query Frame = 2 Query: 2 ATDPVLSFKSAIWFWMTAQPP-KPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYGLNLMAQS 322 ATDP ++FK+A+W WMTA+ P +PS H V+ +W P+ D AGR PGYGLTTNI+ GG++C G A +R+ F+ +C G+ G +LDC+ Q P+ +M+ S Sbjct: 232 ATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA--DRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGGIMSAS 337
BLAST of FC929619 vs. ExPASy Swiss-Prot
Match: CHI4_ARAHY (Endochitinase 4 (Fragment) OS=Arachis hypogaea PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.652e-12 Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 2 Query: 47 MTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIEC 184 MT Q KPSCH+VI + W+P+A D AGR PGYG+ TNIINGG++C Sbjct: 1 MTPQGNKPSCHDVITNAWRPTATDSAAGRAPGYGVITNIINGGLDC 46
BLAST of FC929619 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.324e-11 Identity = 32/93 (34.41%), Postives = 46/93 (49.46%), Query Frame = 2 Query: 2 ATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDC 280 A DP +SFK+A+WFWM N+V+ L G+G T ING +EC AV R+ ++ +C +FG+ PG +L C Sbjct: 217 AQDPTISFKTALWFWM---------------------NNVHQVMLQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVDPGGNLYC 288 The following BLAST results are available for this feature:
BLAST of FC929619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929619 ID=FC929619; Name=FC929619; organism=Citrus clementina; type=EST; length=509bpback to top |