FC929621
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929621 vs. ExPASy Swiss-Prot
Match: GLGA2_GEOMG (Glycogen synthase 2 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=glgA2 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15 Identity = 52/112 (46.43%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWEE 323 D L+PSRFEPCGL QL A+ YGTVPIV TGGL DTV EG GF FS D A V+RALA Y + ++M+ GM +D+SW+ A K+EE Sbjct: 373 DMFLMPSRFEPCGLSQLIALSYGTVPIVRRTGGLADTVIDVTANPREG-NGFSFTEFSAD----------ACWDAVQRALAAYRDREGWRKIMRRGMLRDVSWRSAAGKYEE 473
BLAST of FC929621 vs. ExPASy Swiss-Prot
Match: GLGA_ACICJ (Glycogen synthase OS=Acidiphilium cryptum (strain JF-5) GN=glgA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15 Identity = 49/113 (43.36%), Postives = 61/113 (53.98%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKW 317 AD IL+PSRFEPCGL QL A RYG +P+V+ GGLVDTV + TG Q G PV A +S +RR A Y + M +N MA D+SW PA+ + Sbjct: 367 ADAILVPSRFEPCGLTQLAAQRYGAIPVVSLVGGLVDTVIDANPVAISAGVATGIQFG----------PVSEAGLSDGLRRTAALYADPDKWSRMQRNAMALDVSWTEPARNY 469
BLAST of FC929621 vs. ExPASy Swiss-Prot
Match: GLGA_POLNA (Glycogen synthase OS=Polaromonas naphthalenivorans (strain CJ2) GN=glgA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15 Identity = 48/113 (42.48%), Postives = 64/113 (56.64%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV---------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 317 AD +L+PSRFEPCGL QL+A+RYGTVP+V GGL DTV + TGF G P AA++ + +A+A +G AL +M GMAQ+ SW A ++ Sbjct: 375 ADAMLVPSRFEPCGLTQLYALRYGTVPVVRHVGGLADTVVGASEASVQADRATGFMFG----------PATPAALAQALLQAVAAHGQPALWHRLMLRGMAQNFSWTAAASQY 477
BLAST of FC929621 vs. ExPASy Swiss-Prot
Match: GLGA_ANAD2 (Glycogen synthase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=glgA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15 Identity = 47/105 (44.76%), Postives = 66/105 (62.86%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWE 320 AD L+PSRFEPCGL Q++++RYGTVP+V + GGL DTVE+ F GF G+ E A+ T RRAL + +A +++ GMA+D SW+ A ++E Sbjct: 368 ADLFLMPSRFEPCGLNQMYSLRYGTVPVVRAVGGLADTVED-FDGFARGTGFRFSEYTP----QALLTATRRALDVFRDRRAWRGLVERGMAEDNSWERSAARYE 467
BLAST of FC929621 vs. ExPASy Swiss-Prot
Match: SSY1_SOLTU (Soluble starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.400e-15 Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEE 323 D +L+PSRFEPCGL QL+AMRYGT+PIV STGGL DTV++ Q G P+ + T++ A+ TY + +M+ GM +D SW+ A ++E+ Sbjct: 523 DILLMPSRFEPCGLNQLYAMRYGTIPIVHSTGGLRDTVKDFNPYAQEGIGEGTGWTFSPLTSEKLLDTLKLAIGTYTEHKSSWEGLMRRGMGRDYSWENAAIQYEQ 628
BLAST of FC929621 vs. ExPASy Swiss-Prot
Match: SSY1_ORYSJ (Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=Os06g0160700 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.400e-15 Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEE 323 D +L+PSRFEPCGL QL+AM+YGTVP+V TGGL DTV E F F A P+ + + +R A++TY + +MK GM+ D +W A ++E+ Sbjct: 524 DILLMPSRFEPCGLNQLYAMQYGTVPVVHGTGGLRDTV-ENFNPFAEKGEQGTGWAFSPLTIEKMLWALRMAISTYREHKSSWEGLMKRGMSSDFTWDHAASQYEQ 628
BLAST of FC929621 vs. ExPASy Swiss-Prot
Match: SSY1_ORYSI (Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=OsI_021017 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.400e-15 Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEE 323 D +L+PSRFEPCGL QL+AM+YGTVP+V TGGL DTV E F F A P+ + + +R A++TY + +MK GM+ D +W A ++E+ Sbjct: 524 DILLMPSRFEPCGLNQLYAMQYGTVPVVHGTGGLRDTV-ENFNPFAEKGEQGTGWAFSPLTIEKMLWALRMAISTYREHKSSWEGLMKRGMSSDFTWDHAASQYEQ 628
BLAST of FC929621 vs. ExPASy Swiss-Prot
Match: SSY1_ARATH (Soluble starch synthase, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=At5g24300 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.400e-15 Identity = 44/106 (41.51%), Postives = 66/106 (62.26%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGMAQDLSWKGPAKKWEE 323 D +L+PSRFEPCGL QL+AMRYGT+P+V TGGL DTVE + G+ + P+ ++ + +R A ATY Q+ +M+ GM ++ SW+ A ++E+ Sbjct: 534 DILLMPSRFEPCGLNQLYAMRYGTIPVVHGTGGLRDTVENFNPYAEGGAGTGTGWVFTPLSKDSMVSALRLAAATYREYKQSWEGLMRRGMTRNYSWENAAVQYEQ 639
BLAST of FC929621 vs. ExPASy Swiss-Prot
Match: GLGA_RHIEC (Glycogen synthase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=glgA PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15 Identity = 44/103 (42.72%), Postives = 61/103 (59.22%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 317 D I+IPSRFEPCGL QL+A+RYG VPIVA TGGL DTV + + + PV + +RRA+ Y + L ++ K GM D+SW+ A+++ Sbjct: 367 DAIIIPSRFEPCGLTQLYALRYGCVPIVARTGGLNDTVIDANHAALAAKVATGIQ-FSPVTETGMLQAIRRAMHFYADRKLWTQLQKQGMKSDVSWEKSAERY 468
BLAST of FC929621 vs. ExPASy Swiss-Prot
Match: GLGA1_METCA (Glycogen synthase 1 OS=Methylococcus capsulatus GN=glgA1 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15 Identity = 46/104 (44.23%), Postives = 61/104 (58.65%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKW 317 AD L+PSRFEPCGL QL++ RYGTVPIV GGL DTVE+ T ++ + +P A + V RALA Y + + K GMA+D SW+ A ++ Sbjct: 367 ADIFLMPSRFEPCGLNQLYSQRYGTVPIVRKVGGLADTVEDA-TPERLAAGQASGIVFEPAKPAFLLEAVYRALALYREPEVWRAVCKCGMAKDFSWRKSASRY 469 The following BLAST results are available for this feature:
BLAST of FC929621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929621 ID=FC929621; Name=FC929621; organism=Citrus clementina; type=EST; length=707bpback to top |