FC929635

Overview
NameFC929635
Unique NameFC929635
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length900
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: YES_HUMAN (Proto-oncogene tyrosine-protein kinase Yes OS=Homo sapiens GN=YES1 PE=1 SV=3)

HSP 1 Score: 93.9745 bits (232), Expect = 1.269e-18
Identity = 70/198 (35.35%), Postives = 100/198 (50.51%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            +G G FG V+         VA+K L    T     F  E + + K++H  LVPL  Y    EE + +V E+M  GSL  +L+   G  + L   +   +A   A G+A++      + IHRD++A+NIL+ E    K+ADFGLARLI   E            +  PE    GR T + DV+SFG++  ELVT G+ P
Sbjct:  283 LGQGCFGEVWMGTWNGTTKVAIKTLKPG-TMMPEAFLQEAQIMKKLRHDKLVPL--YAVVSEEPIYIVTEFMSKGSLLDFLKEGDG--KYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGENLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILQTELVTKGRVP 472          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: PLK4_NEMVE (Serine/threonine-protein kinase PLK4 OS=Nematostella vectensis GN=v1g246408 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.269e-18
Identity = 72/224 (32.14%), Postives = 113/224 (50.45%), Query Frame = 3
Query:   18 LTLVHILEATNNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQA--KTQGH-REFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLA-RLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 671
            +T  ++ ++  +F   +++G GGF  VY+   L  G+ VA+K + +   +T G       E+E   ++KH +++ L  Y        LV E   NG  + +LR +  +L+     +  +I     +G+ +LH HG    IIHRD+   NILL+ + +AK+ADFGLA RL    E H +  + GT  YI PE           DV+S G +L  L+ GK P   E
Sbjct:    1 MTTQYMGDSIEDFQVLDLLGKGGFACVYRGRCLATGQEVAIKMIDKKAMRTAGMVNRVCNEVEIHCRLKHPSILELYTYFEDDNYVYLVLELAENGEANRYLRKQGHTLKE---SEVRRIMLQVVKGVLYLHSHG----IIHRDLSLGNILLSSDMDAKIADFGLATRLSLPDEKHYT--MCGTPNYISPEIATRDPHGLESDVWSIGCMLFTLLVGKPPFDTE 215          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: NTRK3_PIG (NT-3 growth factor receptor OS=Sus scrofa GN=NTRK3 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.269e-18
Identity = 66/216 (30.56%), Postives = 104/216 (48.15%), Query Frame = 3
Query:   72 IGDGGFGTVYKAA---LPDGKT---VAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEV------------LGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            +G+G FG V+ A    L   K    VAVK L        ++F  E E L  ++H+++V   G C  G+  ++V+EYM +G L+ +LR       +            LG  +   IA     G+ +L    + H +HRD+   N L+      K+ DFG++R + + + + V         ++PPE     + TT  DV+SFGVIL E+ T GK+P
Sbjct:  544 LGEGAFGKVFLAECYNLSPTKVKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQICSGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 756          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: NTRK3_HUMAN (NT-3 growth factor receptor OS=Homo sapiens GN=NTRK3 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.269e-18
Identity = 66/230 (28.70%), Postives = 107/230 (46.52%), Query Frame = 3
Query:   72 IGDGGFGTVYKAAL------PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEV------------LGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH-----------VSTDIAG----TFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            +G+G FG V+ A         D   VAVK L        ++F  E E L  ++H+++V   G C  G+  ++V+EYM +G L+ +LR       +            LG  +   IA   A G+ +L    + H +HRD+   N L+      K+ DFG++R + + + +           +  ++ G       ++PPE     + TT  DV+SFGVIL E+ T GK+P
Sbjct:  544 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRLFNPSGNDFCIWCEVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 770          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: MUSK_CHICK (Muscle, skeletal receptor tyrosine protein kinase OS=Gallus gallus GN=MUSK PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.269e-18
Identity = 76/244 (31.15%), Postives = 116/244 (47.54%), Query Frame = 3
Query:    9 LMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPD------GKTVAVKKLSQ-AKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRT---------GSLE---------VLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR-LISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            L+   L+ +    NN      IG+G FG V++A  P          VAVK L + A      +F  E   + +  + N+V LLG C+ G+   L++EYM  G L+ +LR+R+         G LE          L    +  IA   A G+A+L        +HRD+   N L+ E    K+ADFGL+R + SA     + + A    ++PPE     R TT  DV+++GV+L E+ + G +P
Sbjct:  640 LLNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEYLRDRSPRNLCSLVQGGLEARACLLNPLALCCTSQLCIAKQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNMYSADYYKANENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQP 880          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: EPHA7_MOUSE (Ephrin type-A receptor 7 OS=Mus musculus GN=Epha7 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.269e-18
Identity = 70/206 (33.98%), Postives = 109/206 (52.91%), Query Frame = 3
Query:   69 IIGDGGFGTVY--KAALPDGKTVAV--KKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL-HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTF--GYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            +IG G FG V   +  LP  + VAV  K L    T+  R +F  E   +G+  H N+V L G  + G+  ++V E+M NG+LD +LR   G   V+   +   +  G A G+ +L   G+    +HRD+ A NIL+N     KV+DFGL+R+I      V T   G     +  PE  Q  + T+  DV+S+G+++ E+++ G+ P
Sbjct:  638 VIGAGEFGEVCSGRLKLPGQRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVI---QLVGMLRGIAAGMRYLADMGY----VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 836          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: YES_MOUSE (Proto-oncogene tyrosine-protein kinase Yes OS=Mus musculus GN=Yes1 PE=1 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 1.657e-18
Identity = 70/198 (35.35%), Postives = 100/198 (50.51%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            +G G FG V+         VA+K L    T     F  E + + K++H  LVPL  Y    EE + +V E+M  GSL  +L+   G  + L   +   +A   A G+A++      + IHRD++A+NIL+ E    K+ADFGLARLI   E            +  PE    GR T + DV+SFG++  ELVT G+ P
Sbjct:  281 LGQGCFGEVWMGTWNGTTKVAIKTLKPG-TMMPEAFLQEAQIMKKLRHDKLVPL--YAVVSEEPIYIVTEFMSKGSLLDFLKEGDG--KYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGENLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILQTELVTKGRVP 470          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: TXK_MOUSE (Tyrosine-protein kinase TXK OS=Mus musculus GN=Txk PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.657e-18
Identity = 74/271 (27.31%), Postives = 119/271 (43.91%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDTPAMRPTMLHVLKFLKEI 881
            IG G FG V+         VA+K +++  +    +F  E + + K+ H  LV L G C   +   +V E+M NG L  +LR R G L+        +  C    G+A+L        IHRD+ A N L++     K++DFG+AR +   E   S+       + PPE     + +++ DV+SFGV++ E+ T GK P                 F+     Q  + +             + + R+   C  ++P  RPT   +L+ L EI
Sbjct:  277 IGSGQFGVVHLGEWRAHIPVAIKAINEG-SMSEEDFIEEAKVMMKLSHSRLVQLYGVCIQQKPLYIVTEFMENGCLLDYLRERKGQLQKALLLSMCQDIC---EGMAYLERSC---YIHRDLAARNCLVSSACVVKISDFGMARYVLDDEYISSSGAKFPVKWCPPEVFHFNKYSSKSDVWSFGVLMWEVFTEGKMP-----------------FENKSNLQVVEAISQGFRLYRPHLAPMTIYRVMYSCWHESPKGRPTFAELLQVLTEI 523          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: SRC64_DROME (Tyrosine-protein kinase Src64B OS=Drosophila melanogaster GN=Src64B PE=1 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 1.657e-18
Identity = 66/192 (34.38%), Postives = 95/192 (49.48%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT 647
            +G G FG V+     +   VAVK L +  T     F  E   + K +H  LV L   CS  E   +V EYM  GSL  +LR   G    L ++    IA   A G+ +L    +  +IHRD+ A N+L+ E   AK+ DFGLAR+I+  E            +  PE    G+ + + DV+S+G++L+EL T
Sbjct:  290 LGRGNFGEVFYGKWRNSIDVAVKTLREG-TMSTAAFLQEAAIMKKFRHNRLVALYAVCSQEEPIYIVQEYMSKGSLLDFLREGDG--RYLHFEDLIYIATQVASGMEYLE---SKQLIHRDLAARNVLIGENNVAKICDFGLARVIADDEYCPKQGSRFPVKWTAPEAIIYGKFSIKSDVWSYGILLMELFT 475          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: PKNA2_BIFLO (Probable serine/threonine-protein kinase pknA2 OS=Bifidobacterium longum GN=pknA2 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.657e-18
Identity = 74/251 (29.48%), Postives = 119/251 (47.41%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQG-HRE-----FTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE------FKDI-EGGNLVGWVFQKMKKGQAADVLDPTVLTADSKP 782
            I +GG  TVY+A     G+TVA+K +     +G HRE     F  E  +   + + ++V +     F     LV EY V+G   + LR+   +       +  ++      GLA  H      ++HRDIK  NIL+N+    ++ DFGLA+  S      +  + GT  Y+ PE  ++ ++T +GD+YS G++  E++TGK P   +      FK + E    V  V Q +    AA +   T    D++P
Sbjct:   20 IAEGGMATVYEAIDERLGRTVAIKVMHTQLAKGPHREQFVERFRREANSAASIANPHIVQVYDTGEFNGLDFLVMEY-VHG---VNLRHEMNAQGTFSVRETLRVVAETLDGLASAHRA---GVVHRDIKPENILINDRGHVQITDFGLAKAASQATLSSTGMLLGTAAYLAPEMIENNQATAQGDLYSVGIMAWEMLTGKVPFDSDNPVTLVFKHVHEDVPSVATVCQGIDPSVAAFIAHLTARQVDARP 263          
The following BLAST results are available for this feature:
BLAST of FC929635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
YES_HUMAN1.269e-1835.35Proto-oncogene tyrosine-protein kinase Yes OS=Homo... [more]
PLK4_NEMVE1.269e-1832.14Serine/threonine-protein kinase PLK4 OS=Nematostel... [more]
NTRK3_PIG1.269e-1830.56NT-3 growth factor receptor OS=Sus scrofa GN=NTRK3... [more]
NTRK3_HUMAN1.269e-1828.70NT-3 growth factor receptor OS=Homo sapiens GN=NTR... [more]
MUSK_CHICK1.269e-1831.15Muscle, skeletal receptor tyrosine protein kinase ... [more]
EPHA7_MOUSE1.269e-1833.98Ephrin type-A receptor 7 OS=Mus musculus GN=Epha7 ... [more]
YES_MOUSE1.657e-1835.35Proto-oncogene tyrosine-protein kinase Yes OS=Mus ... [more]
TXK_MOUSE1.657e-1827.31Tyrosine-protein kinase TXK OS=Mus musculus GN=Txk... [more]
SRC64_DROME1.657e-1834.38Tyrosine-protein kinase Src64B OS=Drosophila melan... [more]
PKNA2_BIFLO1.657e-1829.48Probable serine/threonine-protein kinase pknA2 OS=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2DE11RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2DE11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929635 ID=FC929635; Name=FC929635; organism=Citrus clementina; type=EST; length=900bp
AGCAACCTCTCATGAGACTAACTTTGGTTCATATTCTTGAAGCCACAAAC
AACTTCTGCAAGACAAATATTATTGGAGATGGTGGCTTTGGAACTGTATA
CAAAGCCGCTTTGCCTGATGGGAAAACAGTTGCTGTTAAGAAGTTAAGCC
AGGCTAAAACACAGGGGCACCGTGAATTCACTGCTGAAATGGAAACTCTG
GGCAAGGTGAAGCACCAGAATCTTGTGCCGCTGCTTGGTTACTGCTCATT
TGGTGAGGAGAAGCTTCTTGTTTATGAATACATGGTAAATGGAAGCTTGG
ATCTGTGGTTAAGAAATCGGACGGGTTCTCTTGAAGTTCTTGGCTGGGAT
AAACGCTACAAAATTGCATGTGGCGCTGCTCGTGGGCTAGCTTTTCTTCA
TCACGGCTTCACCCCACATATCATTCATCGCGATATCAAAGCAAGCAACA
TCTTACTCAATGAAGAGTTTGAAGCCAAAGTTGCAGACTTTGGGCTTGCT
AGACTGATCAGTGCATGCGAGACACATGTTAGCACTGATATTGCAGGCAC
ATTTGGTTACATTCCCCCCGAGTATGGGCAGAGTGGGAGATCTACCACAA
GGGGTGATGTATACAGCTTTGGTGTAATCTTGCTGGAATTGGTGACTGGA
AAAGAGCCTACGGGGCCCGAATTCAAAGATATAGAAGGTGGGAACTTGGT
CGGTTGGGTGTTTCAGAAGATGAAGAAGGGACAGGCTGCTGATGTTCTAG
ATCCTACAGTCCTTACTGCAGATTCAAAGCCCATGATGCTTAAAATGCTC
CGGATTGCTGGTGATTGCCTCTCTGATACCCCTGCTATGAGGCCTACCAT
GCTGCATGTGTTGAAGTTTCTGAAAGAGATCAAAGTTGAGTAAGTTTCTT
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