FC929635

Overview
NameFC929635
Unique NameFC929635
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length900
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: M3K2_ARATH (Mitogen-activated protein kinase kinase kinase 2 OS=Arabidopsis thaliana GN=ANP2 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.657e-18
Identity = 80/279 (28.67%), Postives = 133/279 (47.67%), Query Frame = 3
Query:   60 KTNIIGDGGFGTVYKAA-LPDGKTVAVKKL-------SQAKTQGH-REFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET-HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDTPAMRPTMLHVLK 866
            K  +IG G FGTVY    L  G+ +AVK++       S+ KTQ H +E   E++ L  + H N+V  LG     E   ++ E++  GS+   L       E +      ++  G    L +LH+     I+HRDIK +NIL++ +   K+ADFG ++ ++   T   +  + GT  ++ PE       +   D++S G  ++E+VTGK P   ++K+I     +G           +    P  +++D+   +LK       CL   P +RPT   +LK
Sbjct:   70 KGQLIGRGAFGTVYMGMNLDSGELLAVKQVLITSNCASKEKTQAHIQELEEEVKLLKNLSHPNIVRYLGTVREDETLNILLEFVPGGSISSLLEKFGAFPESVVRTYTNQLLLG----LEYLHNHA---IMHRDIKGANILVDNQGCIKLADFGASKQVAELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMVTGKAPWSQQYKEIAAIFHIGTT--------KSHPPIPDNISSDANDFLLK-------CLQQEPNLRPTASELLK 326          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: LCK_CHICK (Proto-oncogene tyrosine-protein kinase LCK OS=Gallus gallus GN=LCK PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.657e-18
Identity = 84/274 (30.66%), Postives = 125/274 (45.62%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP----TGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDTPAMRPTMLHVLKFLKE 878
            +G G FG V+         VA+K L Q  +     F AE   +  ++H  LV L    +  E   ++ EYM  GSL  +L+   G    L  +K   +A   A G+AF+      + IHRD++A+NIL++E    K+ADFGLARLI   E            +  PE    G  T + DV+SFG++L E+VT G+ P    T PE            V Q +++G         +   D+ P  L  L +   C  + P  RPT  ++   L++
Sbjct:  250 LGAGQFGEVWMGFYNGHTKVAIKNLKQG-SMSPSAFLAEANLMKNLQHPRLVRLYAVVT-KEPIYIITEYMEKGSLVDFLKTSEGIK--LSINKLLDMAAQIAEGMAFIE---AKNYIHRDLRAANILVSEALCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE------------VIQNLERGY-------RMPQPDNCPQELYELMM--QCWKEQPEERPTFEYMKSVLED 495          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: SRK3_SPOLA (Tyrosine-protein kinase SRK3 (Fragment) OS=Spongilla lacustris GN=SRK3 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.165e-18
Identity = 66/198 (33.33%), Postives = 100/198 (50.51%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            +G G FG V+ A + +G T    K  +  T   ++F  E + + K+ H NL+ L   C+ GE   +V E M  GS+  +L++  G    L   +   ++   A G+ +L  H +    IHRD+ A NIL+ E    KVADFGLAR+I     +          +  PE     R T + DV+SFGV++ E+VT G+ P
Sbjct:   72 LGQGNFGEVW-AGVWNGTTAVAVKTLKPDTMEVKDFVQEAQVMKKIHHPNLLQLYAVCTIGEPIYIVTELMKYGSMLEYLKHGEGKNITL--HQMVDMSAQIASGMTYLEAHSY----IHRDLAARNILVGEGNVCKVADFGLARVIKEDIYNPREGTKFPIKWTAPEAALYNRFTIKSDVWSFGVLISEIVTHGRMP 262          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: MET_RABIT (Hepatocyte growth factor receptor OS=Oryctolagus cuniculus GN=MET PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.165e-18
Identity = 74/215 (34.42%), Postives = 112/215 (52.09%), Query Frame = 3
Query:   63 TNIIGDGGFGTVYKAAL--PDGKTV--AVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVPLLGYCSFGE-EKLLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 671
            + +IG G FG VY   L   DGK +  AVK L++    G   +F  E   +    H N++ LLG C   E   L+V  YM +G L  ++RN T +    +++G+  +       A+G+ +L    +   +HRD+ A N +L+E+F  KVADFGLAR +   E    H  T       ++  E  Q+ + TT+ DV+SFGV+L EL+T   P  P+
Sbjct: 1082 SEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 1287          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: FRK_HUMAN (Tyrosine-protein kinase FRK OS=Homo sapiens GN=FRK PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.165e-18
Identity = 67/228 (29.39%), Postives = 116/228 (50.88%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV---STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 743
            +G G FG V++    +   VAVK L       + +F  E + +  ++H  L+ L   C+  +   ++ E M +GSL  +L+N TGS   L   ++  +A   A G+A+L    + + IHRD+ A N+L+ E    KVADFGLAR+       +     +I     +  PE  +S + + + DV+SFG++L E++T GK P    +  + G  ++  + Q  +  Q ++
Sbjct:  240 LGSGQFGEVWEGLWNNTTPVAVKTLKPGSMDPN-DFLREAQIMKNLRHPKLIQLYAVCTLEDPIYIITELMRHGSLQEYLQNDTGSKIHL--TQQVDMAAQVASGMAYLE---SRNYIHRDLAARNVLVGEHNIYKVADFGLARVFKVDNEDIYESRHEIKLPVKWTAPEAIRSNKFSIKSDVWSFGILLYEIITYGKMP----YSGMTGAQVIQMLAQNYRLPQPSN 457          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: EPB1B_XENLA (Ephrin type-B receptor 1-B (Fragment) OS=Xenopus laevis GN=ephb1-B PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.165e-18
Identity = 66/208 (31.73%), Postives = 111/208 (53.37%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAAL--PDGK--TVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            +IG G FG VYK  L  P  +  +VA+K L    ++  R +F +E   +G+  H N++ L G  +     +++ E+M NG+LD +LR   G   V+   +   +  G A G+ +L      + +HRD+ A NIL+N     KV+DFGL+R +   +T   T  +   G IP     PE  +  + T+  DV+S+G+++ E+++ G+ P
Sbjct:  542 VIGAGEFGEVYKGRLKLPSKREISVAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVI---QLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQD-DTSDPTYTSSLGGKIPVRWTAPEAIRYRKFTSASDVWSYGIVMWEVMSYGERP 742          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: SRK4_SPOLA (Tyrosine-protein kinase isoform SRK4 OS=Spongilla lacustris GN=SRK1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.827e-18
Identity = 76/260 (29.23%), Postives = 113/260 (43.46%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDTPAMRPT 848
            +G G FG V++       +VAVK L    T    EF  E   + +++H  L+ L   C+  E   +V E M +GSL  +LR    SL++        +    A G+++L      + IHRD+ A NIL+ E    KVADFGLAR+I                +  PE     R T + DV+SFG++L E++T G+ P                 +  M   Q  + +  +           K+  I  DC  + PA RPT
Sbjct:  246 LGAGQFGEVWEGLWNGTTSVAVKTLKPG-TMSIEEFLEEASIMKQLRHPKLIQLYAVCTKEEPIYIVTELMKHGSLLEYLRGDGRSLKL---PDLVDMCSQVASGMSYLEQ---QNYIHRDLAARNILVGEHKICKVADFGLARVIDEEIYEAKLGAKFPIKWTAPEAAMYSRFTIKSDVWSFGIVLYEVITYGRFP-----------------YPGMTNAQVLEQIQQSYRMPRPMGCPEKLYAIMMDCWREDPASRPT 481          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: MET_SAIBB (Hepatocyte growth factor receptor OS=Saimiri boliviensis boliviensis GN=MET PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.827e-18
Identity = 74/213 (34.74%), Postives = 111/213 (52.11%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAAL--PDGKTV--AVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVPLLGYCSFGE-EKLLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 671
            +IG G FG VY   L   DGK +  AVK L++    G   +F  E   +    H N++ LLG C   E   L+V  YM +G L  ++RN T +    +++G+  +       A+G+ +L    +   +HRD+ A N +L+E+F  KVADFGLAR +   E    H  T       ++  E  Q+ + TT+ DV+SFGV+L EL+T   P  P+
Sbjct: 1083 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 1286          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: MET_PONAB (Hepatocyte growth factor receptor OS=Pongo abelii GN=MET PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.827e-18
Identity = 74/213 (34.74%), Postives = 111/213 (52.11%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAAL--PDGKTV--AVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVPLLGYCSFGE-EKLLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 671
            +IG G FG VY   L   DGK +  AVK L++    G   +F  E   +    H N++ LLG C   E   L+V  YM +G L  ++RN T +    +++G+  +       A+G+ +L    +   +HRD+ A N +L+E+F  KVADFGLAR +   E    H  T       ++  E  Q+ + TT+ DV+SFGV+L EL+T   P  P+
Sbjct: 1083 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 1286          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: MET_PAPAN (Hepatocyte growth factor receptor OS=Papio anubis GN=MET PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.827e-18
Identity = 74/213 (34.74%), Postives = 111/213 (52.11%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAAL--PDGKTV--AVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVPLLGYCSFGE-EKLLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 671
            +IG G FG VY   L   DGK +  AVK L++    G   +F  E   +    H N++ LLG C   E   L+V  YM +G L  ++RN T +    +++G+  +       A+G+ +L    +   +HRD+ A N +L+E+F  KVADFGLAR +   E    H  T       ++  E  Q+ + TT+ DV+SFGV+L EL+T   P  P+
Sbjct: 1083 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 1286          
The following BLAST results are available for this feature:
BLAST of FC929635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
M3K2_ARATH1.657e-1828.67Mitogen-activated protein kinase kinase kinase 2 O... [more]
LCK_CHICK1.657e-1830.66Proto-oncogene tyrosine-protein kinase LCK OS=Gall... [more]
SRK3_SPOLA2.165e-1833.33Tyrosine-protein kinase SRK3 (Fragment) OS=Spongil... [more]
MET_RABIT2.165e-1834.42Hepatocyte growth factor receptor OS=Oryctolagus c... [more]
FRK_HUMAN2.165e-1829.39Tyrosine-protein kinase FRK OS=Homo sapiens GN=FRK... [more]
EPB1B_XENLA2.165e-1831.73Ephrin type-B receptor 1-B (Fragment) OS=Xenopus l... [more]
SRK4_SPOLA2.827e-1829.23Tyrosine-protein kinase isoform SRK4 OS=Spongilla ... [more]
MET_SAIBB2.827e-1834.74Hepatocyte growth factor receptor OS=Saimiri boliv... [more]
MET_PONAB2.827e-1834.74Hepatocyte growth factor receptor OS=Pongo abelii ... [more]
MET_PAPAN2.827e-1834.74Hepatocyte growth factor receptor OS=Papio anubis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2DE11RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2DE11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929635 ID=FC929635; Name=FC929635; organism=Citrus clementina; type=EST; length=900bp
AGCAACCTCTCATGAGACTAACTTTGGTTCATATTCTTGAAGCCACAAAC
AACTTCTGCAAGACAAATATTATTGGAGATGGTGGCTTTGGAACTGTATA
CAAAGCCGCTTTGCCTGATGGGAAAACAGTTGCTGTTAAGAAGTTAAGCC
AGGCTAAAACACAGGGGCACCGTGAATTCACTGCTGAAATGGAAACTCTG
GGCAAGGTGAAGCACCAGAATCTTGTGCCGCTGCTTGGTTACTGCTCATT
TGGTGAGGAGAAGCTTCTTGTTTATGAATACATGGTAAATGGAAGCTTGG
ATCTGTGGTTAAGAAATCGGACGGGTTCTCTTGAAGTTCTTGGCTGGGAT
AAACGCTACAAAATTGCATGTGGCGCTGCTCGTGGGCTAGCTTTTCTTCA
TCACGGCTTCACCCCACATATCATTCATCGCGATATCAAAGCAAGCAACA
TCTTACTCAATGAAGAGTTTGAAGCCAAAGTTGCAGACTTTGGGCTTGCT
AGACTGATCAGTGCATGCGAGACACATGTTAGCACTGATATTGCAGGCAC
ATTTGGTTACATTCCCCCCGAGTATGGGCAGAGTGGGAGATCTACCACAA
GGGGTGATGTATACAGCTTTGGTGTAATCTTGCTGGAATTGGTGACTGGA
AAAGAGCCTACGGGGCCCGAATTCAAAGATATAGAAGGTGGGAACTTGGT
CGGTTGGGTGTTTCAGAAGATGAAGAAGGGACAGGCTGCTGATGTTCTAG
ATCCTACAGTCCTTACTGCAGATTCAAAGCCCATGATGCTTAAAATGCTC
CGGATTGCTGGTGATTGCCTCTCTGATACCCCTGCTATGAGGCCTACCAT
GCTGCATGTGTTGAAGTTTCTGAAAGAGATCAAAGTTGAGTAAGTTTCTT
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