FC929635

Overview
NameFC929635
Unique NameFC929635
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length900
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: BRAF1_HUMAN (B-Raf proto-oncogene serine/threonine-protein kinase OS=Homo sapiens GN=BRAF PE=1 SV=4)

HSP 1 Score: 90.1225 bits (222), Expect = 1.832e-17
Identity = 64/200 (32.00%), Postives = 102/200 (51.00%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE-THVSTDIAGTFGYIPPE---YGQSGRSTTRGDVYSFGVILLELVTGKEP 659
            IG G FGTVYK        V +  ++    Q  + F  E+  L K +H N++  +GY S   +  +V ++    SL   L       E++   K   IA   A+G+ +LH      IIHRD+K++NI L+E+   K+ DFGLA + S    +H    ++G+  ++ PE          + + DVY+FG++L EL+TG+ P
Sbjct:  463 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 655          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: BRAF1_COTJA (B-Raf proto-oncogene serine/threonine-protein kinase OS=Coturnix coturnix japonica GN=BRAF PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.832e-17
Identity = 64/200 (32.00%), Postives = 102/200 (51.00%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE-THVSTDIAGTFGYIPPE---YGQSGRSTTRGDVYSFGVILLELVTGKEP 659
            IG G FGTVYK        V +  ++    Q  + F  E+  L K +H N++  +GY S   +  +V ++    SL   L       E++   K   IA   A+G+ +LH      IIHRD+K++NI L+E+   K+ DFGLA + S    +H    ++G+  ++ PE          + + DVY+FG++L EL+TG+ P
Sbjct:  503 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 695          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: BRAF1_CHICK (B-Raf proto-oncogene serine/threonine-protein kinase OS=Gallus gallus GN=BRAF PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.832e-17
Identity = 64/200 (32.00%), Postives = 102/200 (51.00%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE-THVSTDIAGTFGYIPPE---YGQSGRSTTRGDVYSFGVILLELVTGKEP 659
            IG G FGTVYK        V +  ++    Q  + F  E+  L K +H N++  +GY S   +  +V ++    SL   L       E++   K   IA   A+G+ +LH      IIHRD+K++NI L+E+   K+ DFGLA + S    +H    ++G+  ++ PE          + + DVY+FG++L EL+TG+ P
Sbjct:  503 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 695          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: STE7_YEAST (Serine/threonine-protein kinase STE7 OS=Saccharomyces cerevisiae GN=STE7 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.393e-17
Identity = 71/214 (33.18%), Postives = 108/214 (50.47%), Query Frame = 3
Query:   72 IGDGGFGTVYKAA-LPDGKTVAVKKL--SQAKTQGHREFTAEMETLGKVK-HQNLVPLLGYC---SFGEEKLLVYEYMVNGSLD--LWLRNRTGSLEVLGWDKRY-------KIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTG 665
            IG G  GTV KA  +PD K VA K +   Q  +    +   E+  +  VK H+N++   G         E +++ EY   GSLD  L +  R      +   K +       KIA G   GL  L+  +   IIHRDIK SN+L+N + + K+ DFG+++ +      ++    GT  Y+ PE  Q    + +GDV+S G++++ELVTG+ P G
Sbjct:  197 IGAGNSGTVVKALHVPDSKIVAKKTIPVEQNNSTIINQLVRELSIVKNVKPHENIITFYGAYYNQHINNEIIILMEYSDCGSLDKILSVYKRFVQRGTVSSKKTWFNELTISKIAYGVLNGLDHLYRQYK--IIHRDIKPSNVLINSKGQIKLCDFGVSKKLI---NSIADTFVGTSTYMSPERIQGNVYSIKGDVWSLGLMIIELVTGEFPLG 405          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: M3K10_XENLA (Mitogen-activated protein kinase kinase kinase 10 OS=Xenopus laevis GN=map3k10 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.393e-17
Identity = 85/285 (29.82%), Postives = 125/285 (43.86%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK----HQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVL-GWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE--------AKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDTPAMRPTMLHVLKFLKEIK 884
            IIG GGFG VYK    D + VAVK +     +        +    K+     H N++ L G C       LV EY   G L   L  +     VL  W      A   A+G+ +LH+     IIHRD+ +SNIL+ E+ E          + DFGLAR     +       AGT+ ++ PE  +    +   DV+SFGV+L EL+TG+ P    +++I+           +  G A + L   + +   +P     +RI   C    P  RPT   +L+ L  I+
Sbjct:  123 IIGVGGFGKVYKGLWRD-EEVAVKAVRHDPDEDINVTAENVRQEAKIFCMLCHPNIIALTGVCLKPPHLCLVMEYARGGPLHRALAGKKVPAHVLVNW------AVQIAKGMTYLHNEAIVPIIHRDLGSSNILILEKAENDDLFNKTLNITDFGLAR---EWQKTTKMSAAGTYAWMAPEVIRLSLFSKSSDVWSFGVLLWELLTGEVP----YREIDA--------LAVAYGVAMNKLTLPIPSTCPEP----FVRILEACWDPDPHSRPTFSCILEQLTTIE 381          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: IGF1R_RAT (Insulin-like growth factor 1 receptor OS=Rattus norvegicus GN=Igf1r PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.393e-17
Identity = 81/288 (28.12%), Postives = 137/288 (47.57%), Query Frame = 3
Query:   72 IGDGGFGTVYKAAL-------PDGKTVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLE---VL---GWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDTPAMRPTMLHVLKFLKE 878
            +G G FG VY+          P+ + VA+K +++A +   R EF  E   + +    ++V LLG  S G+  L++ E M  G L  +LR+    +E   VL      K  ++A   A G+A+L+       +HRD+ A N ++ E+F  K+ DFG+ R I   + +      G  G +P     PE  + G  TT  DV+SFGV+L E+ T  E     ++ +    ++ +V +    G   D  D      +   M+ +++R+   C    P MRP+ L ++  +K+
Sbjct: 1006 LGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEVENNLVLIPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMSPESLKDGVFTTHSDVWSFGVVLWEIATLAE---QPYQGLSNEQVLRFVME----GGLLDKPD------NCPDMLFELMRM---CWQYNPKMRPSFLEIIGSIKD 1269          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: HCK_RAT (Tyrosine-protein kinase HCK OS=Rattus norvegicus GN=Hck PE=2 SV=4)

HSP 1 Score: 89.7373 bits (221), Expect = 2.393e-17
Identity = 64/192 (33.33%), Postives = 96/192 (50.00%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT 647
            +G G FG V+ A       VAVK +    +     F AE   +  ++H  LV L    S  E   +V E+M  GSL  +L++  GS + L   K    +   + G+AF+      + IHRD++A+NIL++     K+ADFGLAR+I   E            +  PE    G  T + DV+SFG++L+E+VT
Sbjct:  266 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANLMKTLQHDKLVKLHAVVS-QEPIFIVTEFMAKGSLLDFLKSEEGSKQPL--PKLIDFSAQISEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARIIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 450          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: FGR_FSVGR (Tyrosine-protein kinase transforming protein Fgr OS=Feline sarcoma virus (strain Gardner-Rasheed) GN=V-FGR PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.393e-17
Identity = 67/198 (33.84%), Postives = 102/198 (51.52%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            +G G FG V+         VAVK L    T   +    E + +  ++H  LV L  Y    EE + +V E+M +GSL  +L+++ G  + L   +   +A   A G+A++        IHRD++A+NIL+ E    K+ADFGLARLI   E +          +  PE    GR T + DV+SFG++L EL++ G+ P
Sbjct:  292 LGTGCFGDVWLGMWNGSTKVAVKTLKPG-TMSPKASLEEAQIMKLLRHDKLVQL--YAVVPEEPIYIVTEFMCHGSLLEFLKDQEG--QDLTLPQLVDMAAQVAEGMAYMER---MDYIHRDLRAANILVGERLVCKIADFGLARLIEDNEYNPRQGAKFPIKWTAPEAALFGRFTIKSDVWSFGILLTELISKGRVP 481          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: EPA4A_DANRE (Ephrin type-A receptor 4a (Fragment) OS=Danio rerio GN=epha4a PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.393e-17
Identity = 69/213 (32.39%), Postives = 110/213 (51.64%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALP-DGKT---VAVKKLSQAKT-QGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI--SACETHVSTDIAGTF----GYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            IG G FG V    L   GK    VA+K L    T +  R+F +E   +G+  H N++ L G  +  +  +++ EYM NGSLD +LR   G   V+   +   I  G A G+ +L        +HRD+ A NIL+N     KV+DFG++R++       + + +I GT+    G IP     PE     + T+  DV+S+G+++ E+++ G+ P
Sbjct:    1 IGIGEFGEVCSGRLKMPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIRLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGILRGIASGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEEDPDAAYTTREITGTYQSQGGKIPIRWTAPEAITYRKFTSASDVWSYGIVMWEVMSYGERP 207          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: SHKD_DICDI (Dual specificity protein kinase shkD OS=Dictyostelium discoideum GN=shkD PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.126e-17
Identity = 80/279 (28.67%), Postives = 130/279 (46.59%), Query Frame = 3
Query:   60 KTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHR--EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDTPAMRPTMLHVLKFLKEIKVE 890
            +T+ +G G FG+VYK     G+ VAVK   + K   +    F  E++ + K+ H N+V  LG C+   +  +V E +    L+  L N     E     +R ++A  AA G+ +LH G T  I+H D+K +N+L++     KV DFG ++ I   E        GT  ++ PE         + DVYSFG+IL E++T KE      KD +           +      +  +   + AD+ P +  +++    C    P  RP+   +L  L EI ++
Sbjct:  279 RTDFLGQGSFGSVYKGKCR-GQEVAVKIPRKQKLSLYELTSFRHEVKIMSKIFHPNVVLFLGACTQSGKMQIVTE-LCQTDLEKLLHNDRTKKE-FSLFRRMQMAKDAALGMNWLH-GIT-RIVHNDLKTANLLVDINLRVKVTDFGFSQ-IKEGEEFQDKAAKGTPLWMAPEVMMGNPYNEKADVYSFGIILWEILT-KEAPYSHHKDYD-----------IFFNAICNEKERPPIPADTLPSLRHLIQ---TCWDHNPQNRPSFSEILFRLNEILID 536          
The following BLAST results are available for this feature:
BLAST of FC929635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BRAF1_HUMAN1.832e-1732.00B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_COTJA1.832e-1732.00B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_CHICK1.832e-1732.00B-Raf proto-oncogene serine/threonine-protein kina... [more]
STE7_YEAST2.393e-1733.18Serine/threonine-protein kinase STE7 OS=Saccharomy... [more]
M3K10_XENLA2.393e-1729.82Mitogen-activated protein kinase kinase kinase 10 ... [more]
IGF1R_RAT2.393e-1728.13Insulin-like growth factor 1 receptor OS=Rattus no... [more]
HCK_RAT2.393e-1733.33Tyrosine-protein kinase HCK OS=Rattus norvegicus G... [more]
FGR_FSVGR2.393e-1733.84Tyrosine-protein kinase transforming protein Fgr O... [more]
EPA4A_DANRE2.393e-1732.39Ephrin type-A receptor 4a (Fragment) OS=Danio reri... [more]
SHKD_DICDI3.126e-1728.67Dual specificity protein kinase shkD OS=Dictyostel... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2DE11RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2DE11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929635 ID=FC929635; Name=FC929635; organism=Citrus clementina; type=EST; length=900bp
AGCAACCTCTCATGAGACTAACTTTGGTTCATATTCTTGAAGCCACAAAC
AACTTCTGCAAGACAAATATTATTGGAGATGGTGGCTTTGGAACTGTATA
CAAAGCCGCTTTGCCTGATGGGAAAACAGTTGCTGTTAAGAAGTTAAGCC
AGGCTAAAACACAGGGGCACCGTGAATTCACTGCTGAAATGGAAACTCTG
GGCAAGGTGAAGCACCAGAATCTTGTGCCGCTGCTTGGTTACTGCTCATT
TGGTGAGGAGAAGCTTCTTGTTTATGAATACATGGTAAATGGAAGCTTGG
ATCTGTGGTTAAGAAATCGGACGGGTTCTCTTGAAGTTCTTGGCTGGGAT
AAACGCTACAAAATTGCATGTGGCGCTGCTCGTGGGCTAGCTTTTCTTCA
TCACGGCTTCACCCCACATATCATTCATCGCGATATCAAAGCAAGCAACA
TCTTACTCAATGAAGAGTTTGAAGCCAAAGTTGCAGACTTTGGGCTTGCT
AGACTGATCAGTGCATGCGAGACACATGTTAGCACTGATATTGCAGGCAC
ATTTGGTTACATTCCCCCCGAGTATGGGCAGAGTGGGAGATCTACCACAA
GGGGTGATGTATACAGCTTTGGTGTAATCTTGCTGGAATTGGTGACTGGA
AAAGAGCCTACGGGGCCCGAATTCAAAGATATAGAAGGTGGGAACTTGGT
CGGTTGGGTGTTTCAGAAGATGAAGAAGGGACAGGCTGCTGATGTTCTAG
ATCCTACAGTCCTTACTGCAGATTCAAAGCCCATGATGCTTAAAATGCTC
CGGATTGCTGGTGATTGCCTCTCTGATACCCCTGCTATGAGGCCTACCAT
GCTGCATGTGTTGAAGTTTCTGAAAGAGATCAAAGTTGAGTAAGTTTCTT
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