FC929635

Overview
NameFC929635
Unique NameFC929635
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length900
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15034 contig Ccv1_Contig15034:1..900. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: ROCO4_DICDI (Probable serine/threonine-protein kinase roco4 OS=Dictyostelium discoideum GN=roco4 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.126e-17
Identity = 80/286 (27.97%), Postives = 133/286 (46.50%), Query Frame = 3
Query:   72 IGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGH-------REFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE-----AKVADFGLARLISACETHVSTDIAGTFGYIPPEY--GQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDTPAMRPTMLHVLKFLKEIK 884
            IG GGFG V+K  L  D   VA+K L    ++G        +EF  E+  +  + H N+V L G         +V E++  G L   L ++   ++   W  + ++    A G+ ++ +   P I+HRD+++ NI L    E     AKVADFGL++       H  + + G F ++ PE    +    T + D YSF +IL  ++TG+ P    F +   G +    F  M + +    L PT+   D  P +  ++ +   C S  P  RP   +++K L E++
Sbjct: 1032 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLLDKAHPIK---WSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ----SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP----FDEYSYGKI---KFINMIREEG---LRPTI-PEDCPPRLRNVIEL---CWSGDPKKRPHFSYIVKELSELR 1293          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: IGF1R_MOUSE (Insulin-like growth factor 1 receptor OS=Mus musculus GN=Igf1r PE=1 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 3.126e-17
Identity = 81/289 (28.03%), Postives = 137/289 (47.40%), Query Frame = 3
Query:   72 IGDGGFGTVYKAAL-------PDGKTVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLE----VL---GWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDTPAMRPTMLHVLKFLKE 878
            +G G FG VY+          P+ + VA+K +++A +   R EF  E   + +    ++V LLG  S G+  L++ E M  G L  +LR+    +E    VL      K  ++A   A G+A+L+       +HRD+ A N ++ E+F  K+ DFG+ R I   + +      G  G +P     PE  + G  TT  DV+SFGV+L E+ T  E     ++ +    ++ +V +    G   D  D      +   M+ +++R+   C    P MRP+ L ++  +K+
Sbjct: 1006 LGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEVEQNNLVLIPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMSPESLKDGVFTTHSDVWSFGVVLWEIATLAE---QPYQGLSNEQVLRFVME----GGLLDKPD------NCPDMLFELMRM---CWQYNPKMRPSFLEIIGSIKD 1270          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: FRK_MOUSE (Tyrosine-protein kinase FRK OS=Mus musculus GN=Frk PE=1 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 3.126e-17
Identity = 65/228 (28.51%), Postives = 115/228 (50.44%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV---STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 743
            +G G FG V++    +   VAVK L       + +F  E + +  ++H  L+ L   C+  +   ++ E M +GSL  +L+N  GS   L   ++  +A   A G+A+L    + + IHRD+ A N+L+ E    KVADFGLAR+       +     +I     +  PE  ++ + + + DV+SFG++L E++T GK P    +  + G  ++  + Q  +  Q ++
Sbjct:  247 LGSGQFGEVWEGLWNNTTPVAVKTLKPGSMDPN-DFLREAQIMKSLRHPKLIQLYAVCTLEDPIYIITELMRHGSLQEYLQNDGGSKIHL--IQQVDMAAQVASGMAYLE---SQNYIHRDLAARNVLVGEHNIYKVADFGLARVFKVDNEDIYESKHEIKLPVKWTAPEAIRTNKFSIKSDVWSFGILLYEIITYGKMP----YSGMTGAQVIQMLSQNYRLPQPSN 464          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: EPHB3_XENLA (Ephrin type-B receptor 3 OS=Xenopus laevis GN=ephb3 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.126e-17
Identity = 65/208 (31.25%), Postives = 105/208 (50.48%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALPDG----KTVAVKKLSQAKT-QGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            +IG G FG V +  L       + VA+K L    T Q  R+F  E   +G+  H N++ L G  +     +++ E+M NG+LD +LR   G   V+   +   I  G A G+ +L      + +HRD+ A NIL+N     KV+DFGL+R +    +   T  +   G IP     PE     + T+  DV+S+G+++ E+++ G+ P
Sbjct:  614 VIGAGEFGEVCRGKLKQAGRREQFVAIKTLKAGYTEQQRRDFLGEASIMGQFDHPNIIRLEGVVTRSRPVMILTEFMENGALDSFLRMNDGQFTVI---QLVGILRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLENSRSD-PTYTSALGGKIPIRWTAPEAISYRKFTSASDVWSYGIVMWEVMSYGERP 814          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: EPHB2_COTJA (Ephrin type-B receptor 2 OS=Coturnix coturnix japonica GN=EPHB2 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.126e-17
Identity = 67/208 (32.21%), Postives = 107/208 (51.44%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALP-DGKT---VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            +IG G FG V    L   GK    VA+K L    T+  R +F +E   +G+  H N++ L G  +     +++ E+M NGSLD +LR   G   V+   +   +  G A G+ +L      + +HRD+ A N L+N     KV+DFGL+R +   +T   T  +   G IP     PE  Q  + T+  DV+S+G+++ E+++ G+ P
Sbjct:  627 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSSPVMIITEFMENGSLDSFLRQNDGQFTVI---QLVGMLRGIAAGMKYL---ADMNYVHRDLAARNTLVNSNLVCKVSDFGLSRFLED-DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 827          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: CSK_MOUSE (Tyrosine-protein kinase CSK OS=Mus musculus GN=Csk PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.126e-17
Identity = 86/276 (31.16%), Postives = 130/276 (47.10%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEK---LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE--FKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDTPAMRPTMLHVLKFLKEIK 884
            IG G FG V       G  VAVK +    T   + F AE   + +++H NLV LLG     EEK    +V EYM  GSL  +LR+R  S  VLG D   K +      + +L      + +HRD+ A N+L++E+  AKV+DFGL +  S+ +      +  T     PE  +  + +T+ DV+SFG++L E+ +      P    KD         V  +++KG   D  D         P +  +++   +C     A RPT L + + L+ IK
Sbjct:  201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV--EEKGGLYIVTEYMAKGSLVDYLRSRGRS--VLGGDCLLKFSLDVLEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---------VVPRVEKGYKMDAPD------GCPPAVYDVMK---NCSHLDAATRPTFLQLREQLEHIK 444          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: PYK2_DICDI (Dual specificity protein kinase pyk2 OS=Dictyostelium discoideum GN=splB PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 4.082e-17
Identity = 82/276 (29.71%), Postives = 126/276 (45.65%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFG--YIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDTPAMRPTMLHVLKFLKEI 881
            +G+G F  V++     G  VA+KKL     + Q    F  E++ L K  HQN+V  +G C   +   ++ EYM  GSL   L N   S   + +     +       L  LH H  T  I+HRD+ + NILL+E    K++DFGL+R  S  E  ++    G     + PPE  ++ G  + + DVY F +++ E++TG+ P    F D++G      V     +    +  DP           LK+L     C    P  RP   +++  LKEI
Sbjct:  859 VGEGAFSEVWEGWWK-GIHVAIKKLKIIGDEEQFKERFIREVQNLKKGNHQNIVMFIGACY--KPACIITEYMAGGSLYNILHNPNSSTPKVKYSFPLVLKMATDMALGLLHLHSIT--IVHRDLTSQNILLDELGNIKISDFGLSREKSR-EGSMTMTNGGICNPRWRPPELTKNLGHYSEKVDVYCFSLVVWEILTGEIP----FSDLDGSQASAQVAYAGLRPPIPEYCDPE----------LKLL--LTQCWEADPNDRPPFTYIVNKLKEI 1112          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: MET_ECHTE (Hepatocyte growth factor receptor OS=Echinops telfairi GN=MET PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.082e-17
Identity = 72/213 (33.80%), Postives = 107/213 (50.23%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALPDGKT----VAVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVPLLGYCSFGE-EKLLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 671
            +IG G FG VY   L D        AVK L++    G   +F  E   +    H N++ LLG C   E   L+V  YM +G L  ++RN T S    +++G+  +       A+G+ +L    +   +HRD+ A N +L+ +F  KVADFGLAR +   E    H  T       ++  E  Q+ + TT+ DV+SFGV+L EL+T   P  P+
Sbjct: 1082 VIGRGHFGCVYHGTLLDNDDRKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHSPTVKDLIGFGLQ------VAKGMKYLA---SKKFVHRDLAARNCMLDGKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 1285          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: LRRK2_HUMAN (Leucine-rich repeat serine/threonine-protein kinase 2 OS=Homo sapiens GN=LRRK2 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.082e-17
Identity = 86/279 (30.82%), Postives = 133/279 (47.67%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL-----NEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDTPAMRPTMLHVLKFLKEIKV 887
            ++GDG FG+VY+AA  +G+ VAVK  +  K    R    E+  L  + H +L+ LL   +    ++LV E    GSLD  L+    SL       +++IA   A GL +LH      II+RD+K  N+LL     N    AK+AD+G+A+    C   + T   GT G+  PE  +       + DVYSFG++L +++T    TG     +EG        +   +G+  D +          PM+ K+++    CL + P  RPT   V   L   ++
Sbjct: 1884 LLGDGSFGSVYRAAY-EGEEVAVKIFN--KHTSLRLLRQELVVLCHLHHPSLISLL--AAGIRPRMLVMELASKGSLDRLLQQDKASLT---RTLQHRIALHVADGLRYLHSAM---IIYRDLKPHNVLLFTLYPNAAIIAKIADYGIAQY--CCRMGIKTS-EGTPGFRAPEVARGNVIYNQQADVYSFGLLLYDILT----TGGRI--VEGLKFPNEFDELEIQGKLPDPVKE--YGCAPWPMVEKLIK---QCLKENPQERPTSAQVFDILNSAEL 2137          
BLAST of FC929635 vs. ExPASy Swiss-Prot
Match: IPL1_YARLI (Spindle assembly checkpoint kinase OS=Yarrowia lipolytica GN=IPL1 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.082e-17
Identity = 76/251 (30.28%), Postives = 126/251 (50.20%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKT--VAVKKLSQAK--TQGH--REFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRI 806
            +G G FG VY   + D KT  V+  K  + K   +G+  ++F  E+E    ++H N++ L G+    +   L+ EY+V+G L   LRN+    E       Y++    +  L +LH     +IIHRDIK  NILL+     K++DFG +  + A     ST + GT  Y+PPE  QS       DV+S G+++ E + G     P F++  G       ++++ K    D+  P  ++AD+  ++ +ML +
Sbjct:  105 LGKGKFGKVY--LVKDKKTGFVSALKCMEKKELVEGNVEKQFRREVEIQSNLRHTNVLRLFGHFHDKDRVYLILEYVVHGELYKLLRNQKRFTESTASSYIYQM----SEALLYLH---GKNIIHRDIKPENILLHFNDTIKISDFGWS--VHAPSNRRST-LCGTMDYLPPEIVQSRPYDKNVDVWSLGILMYEFLCG----APPFEEPGGAQA---TYRRIVK---LDLRIPPYVSADAADLIKRMLTL 333          
The following BLAST results are available for this feature:
BLAST of FC929635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ROCO4_DICDI3.126e-1727.97Probable serine/threonine-protein kinase roco4 OS=... [more]
IGF1R_MOUSE3.126e-1728.03Insulin-like growth factor 1 receptor OS=Mus muscu... [more]
FRK_MOUSE3.126e-1728.51Tyrosine-protein kinase FRK OS=Mus musculus GN=Frk... [more]
EPHB3_XENLA3.126e-1731.25Ephrin type-B receptor 3 OS=Xenopus laevis GN=ephb... [more]
EPHB2_COTJA3.126e-1732.21Ephrin type-B receptor 2 OS=Coturnix coturnix japo... [more]
CSK_MOUSE3.126e-1731.16Tyrosine-protein kinase CSK OS=Mus musculus GN=Csk... [more]
PYK2_DICDI4.082e-1729.71Dual specificity protein kinase pyk2 OS=Dictyostel... [more]
MET_ECHTE4.082e-1733.80Hepatocyte growth factor receptor OS=Echinops telf... [more]
LRRK2_HUMAN4.082e-1730.82Leucine-rich repeat serine/threonine-protein kinas... [more]
IPL1_YARLI4.082e-1730.28Spindle assembly checkpoint kinase OS=Yarrowia lip... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2DE11RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2DE11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929635 ID=FC929635; Name=FC929635; organism=Citrus clementina; type=EST; length=900bp
AGCAACCTCTCATGAGACTAACTTTGGTTCATATTCTTGAAGCCACAAAC
AACTTCTGCAAGACAAATATTATTGGAGATGGTGGCTTTGGAACTGTATA
CAAAGCCGCTTTGCCTGATGGGAAAACAGTTGCTGTTAAGAAGTTAAGCC
AGGCTAAAACACAGGGGCACCGTGAATTCACTGCTGAAATGGAAACTCTG
GGCAAGGTGAAGCACCAGAATCTTGTGCCGCTGCTTGGTTACTGCTCATT
TGGTGAGGAGAAGCTTCTTGTTTATGAATACATGGTAAATGGAAGCTTGG
ATCTGTGGTTAAGAAATCGGACGGGTTCTCTTGAAGTTCTTGGCTGGGAT
AAACGCTACAAAATTGCATGTGGCGCTGCTCGTGGGCTAGCTTTTCTTCA
TCACGGCTTCACCCCACATATCATTCATCGCGATATCAAAGCAAGCAACA
TCTTACTCAATGAAGAGTTTGAAGCCAAAGTTGCAGACTTTGGGCTTGCT
AGACTGATCAGTGCATGCGAGACACATGTTAGCACTGATATTGCAGGCAC
ATTTGGTTACATTCCCCCCGAGTATGGGCAGAGTGGGAGATCTACCACAA
GGGGTGATGTATACAGCTTTGGTGTAATCTTGCTGGAATTGGTGACTGGA
AAAGAGCCTACGGGGCCCGAATTCAAAGATATAGAAGGTGGGAACTTGGT
CGGTTGGGTGTTTCAGAAGATGAAGAAGGGACAGGCTGCTGATGTTCTAG
ATCCTACAGTCCTTACTGCAGATTCAAAGCCCATGATGCTTAAAATGCTC
CGGATTGCTGGTGATTGCCTCTCTGATACCCCTGCTATGAGGCCTACCAT
GCTGCATGTGTTGAAGTTTCTGAAAGAGATCAAAGTTGAGTAAGTTTCTT
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