FC929653

Overview
NameFC929653
Unique NameFC929653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: ACA4_ARATH (Calcium-transporting ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=ACA4 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 9.286e-55
Identity = 108/175 (61.71%), Postives = 132/175 (75.43%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSDAHSNTV*NTQIFNSFVLCQV 759
            +ADIGL MGI  TEVAK ++++II+DDNF ++V V RWGR+VY NIQKF+QFQLTVNV +L+INFV+A  +G  PL AVQLLWVN+IMDTLGALALATEPP + LM R+P+ R    IT  MWRN+  Q+ YQ+ VL +LNF GK +L L+      S  V NT IFNSFV CQV
Sbjct:  759 EADIGLAMGIAGTEVAKENADVIIMDDNFKTIVNVARWGRAVYINIQKFVQFQLTVNVVALIINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRAPIARTASFITKTMWRNIAGQSVYQLIVLGILNFAGKSLLKLDGPD---STAVLNTVIFNSFVFCQV 930          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: ACA1_ARATH (Calcium-transporting ATPase 1, chloroplastic OS=Arabidopsis thaliana GN=ACA1 PE=1 SV=3)

HSP 1 Score: 211.846 bits (538), Expect = 3.529e-54
Identity = 108/176 (61.36%), Postives = 136/176 (77.27%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLES-DSDAHSNTV*NTQIFNSFVLCQV 759
            +ADIGL MGI  TEVAK S+++IILDDNF+++V V +WGRSVY NIQKF+QFQLTVNV +L++NF++A  +G+ PL AVQLLWVN+IMDTLGALALATEPP D LM RSPVGR    I+N+MWRN+L Q+ YQ+ ++  L  +GK +  L+  DSD   NT+    IFN FV CQV
Sbjct:  768 EADIGLAMGISGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPQDDLMKRSPVGRKGNFISNVMWRNILGQSLYQLVIIWCLQTKGKTMFGLDGPDSDLTLNTL----IFNIFVFCQV 939          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: ACA2_ARATH (Calcium-transporting ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=ACA2 PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 7.861e-54
Identity = 109/175 (62.29%), Postives = 130/175 (74.29%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSDAHSNTV*NTQIFNSFVLCQV 759
            +ADIGL MGI  TEVAK S+++IILDDNF+++V V +WGRSVY NIQKF+QFQLTVNV +LV+NF +A  +G  PL AVQLLWVN+IMDTLGALALATEPP D LM R PVGR    ITN MWRN+L QA YQ  V+ +L  +GK +  L+      S  + NT IFN FV CQV
Sbjct:  765 EADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALVVNFSSACLTGSAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRLPVGRRGNFITNAMWRNILGQAVYQFIVIWILQAKGKAMFGLDGPD---STLMLNTLIFNCFVFCQV 936          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: ACA6_ORYSJ (Probable calcium-transporting ATPase 6, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os05g0495600 PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.287e-53
Identity = 106/175 (60.57%), Postives = 131/175 (74.86%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSDAHSNTV*NTQIFNSFVLCQV 759
            ++DIGL MGI  TEVAK S+++II+DDNF ++V V RWGR+VY NIQKF+QFQLTVN+ +L++NFV+A   G  PL AVQLLWVN+IMDTLGALALATEPP D +M R PV R +  IT IMWRN+L Q  YQ+ VL  L   GK++L++E      S+   NT IFNSFV CQV
Sbjct:  750 ESDIGLAMGITGTEVAKESADVIIMDDNFETIVNVARWGRAVYLNIQKFVQFQLTVNIVALIVNFVSACIIGSAPLTAVQLLWVNMIMDTLGALALATEPPNDEMMKRPPVRRGDNFITRIMWRNILGQGLYQLLVLATLMVIGKKLLSIEG---PQSDKTINTLIFNSFVFCQV 921          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: ACA7_ARATH (Putative calcium-transporting ATPase 7, plasma membrane-type OS=Arabidopsis thaliana GN=ACA7 PE=2 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 1.936e-52
Identity = 106/175 (60.57%), Postives = 129/175 (73.71%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSDAHSNTV*NTQIFNSFVLCQV 759
            +ADIGL MGI  TEVAK  +++IILDDNF+++V V +WGRSVY NIQKF+QFQLTVNV +L++NF +A  +G  PL AVQLLWVN+IMDTLGALALATEPP + LM R PVGR    ITN MWRN+L QA YQ  ++ +L  +GK +  L     + S  V NT IFN FV CQV
Sbjct:  766 EADIGLAMGIAGTEVAKEIADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGSAPLTAVQLLWVNMIMDTLGALALATEPPNNELMKRMPVGRRGNFITNAMWRNILGQAVYQFIIIWILQAKGKSMFGLVG---SDSTLVLNTLIFNCFVFCQV 937          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: ACA3_ORYSJ (Calcium-transporting ATPase 3, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os01g0939100 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.936e-52
Identity = 101/175 (57.71%), Postives = 136/175 (77.71%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSDAHSNTV*NTQIFNSFVLCQV 759
            +ADIGL MGI  TEVAK ++++II+DDNF++++ V +WGRSVY NIQKF+QFQLTVNV +L++NF++A  +G  PL  VQLLWVNLIMDTLGALALATEPP D +M R PVGR +  IT +MWRN++ Q+ YQ+ VL VL  +GK +L +   +   ++++ NT +FN+FV CQV
Sbjct:  771 EADIGLAMGIAGTEVAKENADVIIMDDNFSTIINVAKWGRSVYINIQKFVQFQLTVNVVALMVNFISASFTGSAPLTIVQLLWVNLIMDTLGALALATEPPNDAMMKRPPVGRGDNFITKVMWRNIVGQSIYQLVVLGVLLLRGKSLLQI---NGPQADSLLNTFVFNTFVFCQV 942          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT2B4_RAT (Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus GN=Atp2b4 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.486e-44
Identity = 91/178 (51.12%), Postives = 127/178 (71.35%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSDAHSNTV*N---TQIFNSFVLCQV 759
            +AD+G  MGI  T+VAK +S+II+ DDNF S+VK V WGR+VY +I KF+QFQLTVNV ++++ F  A  + D PL AVQ+LWVNLIMDT  +LALATEPPTD L+ R P GR +PLI+  M +N+L  A YQ+ ++ +L F G ++ +++S   A  N+  +   T +FN+FVL Q+
Sbjct:  795 KADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFSGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTDSLLRRRPYGRNKPLISRTMMKNILGHAVYQLGIVFLLVFAGDKLFDIDSGRKAPLNSPPSQHYTIVFNTFVLMQL 972          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT2B4_HUMAN (Plasma membrane calcium-transporting ATPase 4 OS=Homo sapiens GN=ATP2B4 PE=1 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 7.375e-44
Identity = 90/178 (50.56%), Postives = 127/178 (71.35%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSDAHSNTV*N---TQIFNSFVLCQV 759
            +AD+G  MGI  T+VAK +S+II+ DDNF S+VK V WGR+VY +I KF+QFQLTVNV ++++ F  A  + D PL AVQ+LWVNLIMDT  +LALATEPPT+ L+ R P GR +PLI+  M +N+L  A YQ+ V+ +L F G++  +++S   A  ++  +   T +FN+FVL Q+
Sbjct:  795 KADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLKRRPYGRNKPLISRTMMKNILGHAFYQLIVIFILVFAGEKFFDIDSGRKAPLHSPPSQHYTIVFNTFVLMQL 972          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT2B1_RAT (Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus GN=Atp2b1 PE=2 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 7.375e-44
Identity = 91/178 (51.12%), Postives = 127/178 (71.35%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSDAHSNTV*N---TQIFNSFVLCQV 759
            +AD+G  MGI  T+VAK +S+II+ DDNF S+VK V WGR+VY +I KF+QFQLTVNV ++++ F  A  + D PL AVQ+LWVNLIMDTL +LALATEPPT+ L+ R P GR +PLI+  M +N+L  A YQ+ V+  L F G++  +++S  +A  +   +   T +FN+FVL Q+
Sbjct:  807 KADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTLASLALATEPPTESLLLRKPYGRNKPLISRTMMKNILGHAFYQLVVVFTLLFAGEKFFDIDSGRNAPLHAPPSEHYTIVFNTFVLMQL 984          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT2B1_PIG (Plasma membrane calcium-transporting ATPase 1 OS=Sus scrofa GN=ATP2B1 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 7.375e-44
Identity = 91/178 (51.12%), Postives = 127/178 (71.35%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSDAHSNTV*N---TQIFNSFVLCQV 759
            +AD+G  MGI  T+VAK +S+II+ DDNF S+VK V WGR+VY +I KF+QFQLTVNV ++++ F  A  + D PL AVQ+LWVNLIMDTL +LALATEPPT+ L+ R P GR +PLI+  M +N+L  A YQ+ V+  L F G++  +++S  +A  +   +   T +FN+FVL Q+
Sbjct:  807 KADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTLASLALATEPPTESLLLRKPYGRNKPLISRTMMKNILGHAFYQLVVVFTLLFAGEKFFDIDSGRNAPLHAPPSEHYTIVFNTFVLMQL 984          
The following BLAST results are available for this feature:
BLAST of FC929653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
ACA4_ARATH9.286e-5561.71Calcium-transporting ATPase 4, plasma membrane-typ... [more]
ACA1_ARATH3.529e-5461.36Calcium-transporting ATPase 1, chloroplastic OS=Ar... [more]
ACA2_ARATH7.861e-5462.29Calcium-transporting ATPase 2, plasma membrane-typ... [more]
ACA6_ORYSJ2.287e-5360.57Probable calcium-transporting ATPase 6, plasma mem... [more]
ACA7_ARATH1.936e-5260.57Putative calcium-transporting ATPase 7, plasma mem... [more]
ACA3_ORYSJ1.936e-5257.71Calcium-transporting ATPase 3, plasma membrane-typ... [more]
AT2B4_RAT1.486e-4451.12Plasma membrane calcium-transporting ATPase 4 OS=R... [more]
AT2B4_HUMAN7.375e-4450.56Plasma membrane calcium-transporting ATPase 4 OS=H... [more]
AT2B1_RAT7.375e-4451.12Plasma membrane calcium-transporting ATPase 1 OS=R... [more]
AT2B1_PIG7.375e-4451.12Plasma membrane calcium-transporting ATPase 1 OS=S... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2DF06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2DF06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929653 ID=FC929653; Name=FC929653; organism=Citrus clementina; type=EST; length=809bp
GATGGCACTAATGATGCTCCTGCCCTACATGAGGTGAAATGGATGTGATT
CTACTTTGATATTTTATATTCTTACATGACAGTGTATTTAAAATTTCTGT
TTCATCGTCAATGTTTTTAAATCATCTGGACTACTAAAACAGTTTCGTAT
TGGAGTTAAACAAGTCAGGGTAGGTCCTGGCAACATGCACTAAATATGAT
ATTATAGCTAACGGAATTAAGTCATTTTGAAATTCAAGCAGACATTGGTC
TGACAATGGGTATTCAAAGAACCGAGGTTGCTAAATAGAGCTCAAATATT
ATTATCTTGGACGACAATTTTGCTTCAGTTGTGAAGGTTGTCAGATGGGG
TCGTTCTGTATATGCAAATATCCAGAAATTCATCCAGTTTCAACTTACTG
TCAATGTCGCATCTCTCGTCATTAATTTTGTGGCTGCTGTTTCCTCTGGT
GATGTTCCCCTCAATGCAGTGCAGCTTCTCTGGGTTAACCTCATCATGGA
TACCCTGGGAGCCTTAGCCTTGGCTACTGAACCACCAACTGATCACCTGA
TGCATAGGTCCCCAGTTGGTCGAATAGAACCTCTTATAACTAATATAATG
TGGAGGAATCTCTTAATACAGGCTTCCTACCAAGTAAGTGTCCTGCTTGT
CCTGAATTTTCAAGGGAAGAGGATTCTGAACCTGGAGAGTGATTCCGATG
CCCATTCCAACACAGTATAAAATACTCAGATATTCAATTCTTTTGTCCTT
TGCCAGGTTAGTAAATTATCACGGAATACAATAATTTGTTAAGTCGAGCT
TCTGTTTGT
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