FC929653

Overview
NameFC929653
Unique NameFC929653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT1A1_HUMAN (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Homo sapiens GN=ATP1A1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.570e-14
Identity = 45/140 (32.14%), Postives = 81/140 (57.86%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVL 654
            +ADIG+ MGI  ++V+K ++++I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  +++  +PL  V +L ++L  D + A++LA E     +M R P     P    ++   L+  A  Q+ ++  L
Sbjct:  727 KADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQP---RNPKTDKLVNERLISMAYGQIGMIQAL 863          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT1A1_HORSE (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Equus caballus GN=ATP1A1 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.570e-14
Identity = 45/140 (32.14%), Postives = 81/140 (57.86%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVL 654
            +ADIG+ MGI  ++V+K ++++I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  +++  +PL  V +L ++L  D + A++LA E     +M R P     P    ++   L+  A  Q+ ++  L
Sbjct:  725 KADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQP---RNPQTDKLVNERLISMAYGQIGMIQAL 861          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT1A1_BOVIN (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Bos taurus GN=ATP1A1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.570e-14
Identity = 45/140 (32.14%), Postives = 81/140 (57.86%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVL 654
            +ADIG+ MGI  ++V+K ++++I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  +++  +PL  V +L ++L  D + A++LA E     +M R P     P    ++   L+  A  Q+ ++  L
Sbjct:  725 KADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQP---RNPQTDKLVNERLISMAYGQIGMIQAL 861          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT1A2_RAT (Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus GN=Atp1a2 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.662e-14
Identity = 40/110 (36.36%), Postives = 70/110 (63.64%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSP 564
            +ADIG+ MGI  ++V+K ++++I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  +++  +PL  V +L ++L  D + A++LA E     +M R P
Sbjct:  724 KADIGIAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEAAESDIMKRQP 833          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT1A2_MOUSE (Sodium/potassium-transporting ATPase subunit alpha-2 OS=Mus musculus GN=Atp1a2 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.662e-14
Identity = 40/110 (36.36%), Postives = 70/110 (63.64%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSP 564
            +ADIG+ MGI  ++V+K ++++I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  +++  +PL  V +L ++L  D + A++LA E     +M R P
Sbjct:  724 KADIGIAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEAAESDIMKRQP 833          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT1A2_HUMAN (Sodium/potassium-transporting ATPase subunit alpha-2 OS=Homo sapiens GN=ATP1A2 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.662e-14
Identity = 40/110 (36.36%), Postives = 70/110 (63.64%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSP 564
            +ADIG+ MGI  ++V+K ++++I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  +++  +PL  V +L ++L  D + A++LA E     +M R P
Sbjct:  724 KADIGIAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEAAESDIMKRQP 833          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT1A2_CHICK (Sodium/potassium-transporting ATPase subunit alpha-2 OS=Gallus gallus GN=ATP1A2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.662e-14
Identity = 45/140 (32.14%), Postives = 81/140 (57.86%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVL 654
            +ADIG+ MGI  ++V+K ++++I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  +++  +PL  V +L ++L  D + A++LA E     +M R P     P    ++   L+  A  Q+ ++  L
Sbjct:  721 KADIGIAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEAAESDIMKRQP---RNPRTDKLVNERLISMAYGQIGMIQAL 857          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT1A2_BOVIN (Sodium/potassium-transporting ATPase subunit alpha-2 OS=Bos taurus GN=ATP1A2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.662e-14
Identity = 45/140 (32.14%), Postives = 81/140 (57.86%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVL 654
            +ADIG+ MGI  ++V+K ++++I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  +++  +PL  V +L ++L  D + A++LA E     +M R P     P    ++   L+  A  Q+ ++  L
Sbjct:  724 KADIGIAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEAAESDIMKRQP---RNPQTDKLVNERLISMAYGQIGMIQAL 860          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT1A1_RAT (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus GN=Atp1a1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.662e-14
Identity = 45/140 (32.14%), Postives = 81/140 (57.86%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVL 654
            +ADIG+ MGI  ++V+K ++++I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  +++  +PL  V +L ++L  D + A++LA E     +M R P     P    ++   L+  A  Q+ ++  L
Sbjct:  727 KADIGVAMGIVGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQP---RNPKTDKLVNERLISMAYGQIGMIQAL 863          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT1A1_PONAB (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Pongo abelii GN=ATP1A1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.662e-14
Identity = 40/110 (36.36%), Postives = 70/110 (63.64%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSP 564
            +ADIG+ MGI  ++V+K ++++I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  +++  +PL  V +L ++L  D + A++LA E     +M R P
Sbjct:  727 KADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQP 836          
The following BLAST results are available for this feature:
BLAST of FC929653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
AT1A1_HUMAN3.570e-1432.14Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A1_HORSE3.570e-1432.14Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A1_BOVIN3.570e-1432.14Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A2_RAT4.662e-1436.36Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A2_MOUSE4.662e-1436.36Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A2_HUMAN4.662e-1436.36Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A2_CHICK4.662e-1432.14Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A2_BOVIN4.662e-1432.14Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A1_RAT4.662e-1432.14Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A1_PONAB4.662e-1436.36Sodium/potassium-transporting ATPase subunit alpha... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2DF06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2DF06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929653 ID=FC929653; Name=FC929653; organism=Citrus clementina; type=EST; length=809bp
GATGGCACTAATGATGCTCCTGCCCTACATGAGGTGAAATGGATGTGATT
CTACTTTGATATTTTATATTCTTACATGACAGTGTATTTAAAATTTCTGT
TTCATCGTCAATGTTTTTAAATCATCTGGACTACTAAAACAGTTTCGTAT
TGGAGTTAAACAAGTCAGGGTAGGTCCTGGCAACATGCACTAAATATGAT
ATTATAGCTAACGGAATTAAGTCATTTTGAAATTCAAGCAGACATTGGTC
TGACAATGGGTATTCAAAGAACCGAGGTTGCTAAATAGAGCTCAAATATT
ATTATCTTGGACGACAATTTTGCTTCAGTTGTGAAGGTTGTCAGATGGGG
TCGTTCTGTATATGCAAATATCCAGAAATTCATCCAGTTTCAACTTACTG
TCAATGTCGCATCTCTCGTCATTAATTTTGTGGCTGCTGTTTCCTCTGGT
GATGTTCCCCTCAATGCAGTGCAGCTTCTCTGGGTTAACCTCATCATGGA
TACCCTGGGAGCCTTAGCCTTGGCTACTGAACCACCAACTGATCACCTGA
TGCATAGGTCCCCAGTTGGTCGAATAGAACCTCTTATAACTAATATAATG
TGGAGGAATCTCTTAATACAGGCTTCCTACCAAGTAAGTGTCCTGCTTGT
CCTGAATTTTCAAGGGAAGAGGATTCTGAACCTGGAGAGTGATTCCGATG
CCCATTCCAACACAGTATAAAATACTCAGATATTCAATTCTTTTGTCCTT
TGCCAGGTTAGTAAATTATCACGGAATACAATAATTTGTTAAGTCGAGCT
TCTGTTTGT
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