FC929653

Overview
NameFC929653
Unique NameFC929653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT1A1_CHICK (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Gallus gallus GN=ATP1A1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.357e-13
Identity = 44/140 (31.43%), Postives = 80/140 (57.14%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVL 654
            +ADIG+ MGI  ++V+K ++++I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  +++  +PL    +L ++L  D + A++LA E     +M R P     P    ++   L+  A  Q+ ++  L
Sbjct:  725 KADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTCTILCIDLGTDMVPAISLAYEQAESDIMKRQP---RNPKTDKLVNERLISMAYGQIGMIQAL 861          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT1A1_CANFA (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Canis familiaris GN=ATP1A1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.357e-13
Identity = 44/140 (31.43%), Postives = 80/140 (57.14%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVL 654
            +ADIG+ MGI  ++ +K ++++I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  +++  +PL  V +L ++L  D + A++LA E     +M R P     P    ++   L+  A  Q+ ++  L
Sbjct:  725 KADIGVAMGIVGSDASKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQP---RNPKTDKLVNERLISMAYGQIGMIQAL 861          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT1A_TAESO (Sodium/potassium-transporting ATPase subunit alpha OS=Taenia solium PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.314e-13
Identity = 54/166 (32.53%), Postives = 90/166 (54.22%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRI------EPLITNIMWRNLLIQASYQVSVLLVL----NFQGKRILNLESDSDA 702
            +ADIG+ MGI  ++V+K ++++I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  ++   +PL  + +L ++L  D + A++LA E   D +M R P          E LI+    +  +IQAS    V  V+     F   R+L L    D+
Sbjct:  718 KADIGVAMGITGSDVSKQAADMILLDDNFASIVTGVEEGRIIFDNLKKSIAYTLTSNIPEITPFLIFILADVPLPLGTITILCIDLGTDMVPAISLAYEEAED-IMKRMPRDPFRDKLVNERLISMAYGQIGMIQASGGFFVYFVIMAENGFWPSRLLGLRKQWDS 882          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT1A_HYDAT (Sodium/potassium-transporting ATPase subunit alpha OS=Hydra attenuata PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.155e-13
Identity = 41/120 (34.17%), Postives = 71/120 (59.17%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITN 594
            +ADIG+ MGI  ++V+K ++++I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  +    +PL  + +L ++L  D + A++LA E     +M R P   I   + N
Sbjct:  735 KADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIVYTLTSNIPEISPFLMFILFGIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRHPRNPIRDKLVN 854          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: ATN5_YEAST (Sodium transport ATPase 5 OS=Saccharomyces cerevisiae GN=ENA5 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.733e-13
Identity = 43/114 (37.72%), Postives = 66/114 (57.89%), Query Frame = 1
Query:  238 ADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAS---LVINFVAAVSSGD--VPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSP 564
            A++G+ MGI  ++V+K +S+I++ DDNFAS++  V  GR +  NIQKF+   L  NVA    L+I  V    +G    PL+ V++LW+ ++     A+ L  E     LM R P
Sbjct:  768 ANVGIAMGINGSDVSKEASDIVLSDDNFASILNAVEEGRRMTDNIQKFVLQLLAENVAQALYLIIGLVFRDENGKSVFPLSPVEVLWIIVVTSCFPAMGLGLEKAAPDLMDRPP 881          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: ATN2_YEAST (Sodium transport ATPase 2 OS=Saccharomyces cerevisiae GN=ENA2 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.733e-13
Identity = 43/114 (37.72%), Postives = 66/114 (57.89%), Query Frame = 1
Query:  238 ADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAS---LVINFVAAVSSGD--VPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSP 564
            A++G+ MGI  ++V+K +S+I++ DDNFAS++  V  GR +  NIQKF+   L  NVA    L+I  V    +G    PL+ V++LW+ ++     A+ L  E     LM R P
Sbjct:  768 ANVGIAMGINGSDVSKEASDIVLSDDNFASILNAVEEGRRMTDNIQKFVLQLLAENVAQALYLIIGLVFRDENGKSVFPLSPVEVLWIIVVTSCFPAMGLGLEKAAPDLMDRPP 881          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: ATN1_YEAST (Sodium transport ATPase 1 OS=Saccharomyces cerevisiae GN=ENA1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.733e-13
Identity = 43/114 (37.72%), Postives = 66/114 (57.89%), Query Frame = 1
Query:  238 ADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAS---LVINFVAAVSSGD--VPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSP 564
            A++G+ MGI  ++V+K +S+I++ DDNFAS++  V  GR +  NIQKF+   L  NVA    L+I  V    +G    PL+ V++LW+ ++     A+ L  E     LM R P
Sbjct:  768 ANVGIAMGINGSDVSKEASDIVLSDDNFASILNAVEEGRRMTDNIQKFVLQLLAENVAQALYLIIGLVFRDENGKSVFPLSPVEVLWIIVVTSCFPAMGLGLEKAAPDLMDRPP 881          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT1B_ARTSF (Sodium/potassium-transporting ATPase subunit alpha-B OS=Artemia sanfranciscana PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.733e-13
Identity = 41/120 (34.17%), Postives = 71/120 (59.17%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITN 594
            +ADIG+ MGI  ++V+K ++++I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  +    +PL  V +L ++L  D + A++LA E     +M R P   +   + N
Sbjct:  708 KADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIVYTLTSNIPEISPFLLFILFDIPLPLGTVTILCIDLGTDMVPAISLAYEEAESDIMKRRPRNPVTDKLVN 827          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: ATC3_SCHPO (Calcium-transporting ATPase 3 OS=Schizosaccharomyces pombe GN=cta3 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.793e-13
Identity = 37/115 (32.17%), Postives = 66/115 (57.39%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDV-----PLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSP 564
            QA++G+ MG   ++VAK +S+I++ DDNF+S+V  +  GR ++ NI +F+   L  NV  +++  V      +V     P++ V++LW N+I  +  ++ L  E     +M R P
Sbjct:  713 QANVGIAMGQNGSDVAKDASDIVLTDDNFSSIVNAIEEGRRMFDNIMRFVLHLLVSNVGEVILLVVGLAFRDEVHLSVFPMSPVEILWCNMITSSFPSMGLGMELAQPDVMERLP 827          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: ATNA_DROME (Sodium/potassium-transporting ATPase subunit alpha OS=Drosophila melanogaster GN=Atpalpha PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.959e-12
Identity = 40/110 (36.36%), Postives = 67/110 (60.91%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSP 564
            +ADIG+ MGI  ++V+K ++++I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +       +    +PL  V +L ++L  D + A++LA E     +M R P
Sbjct:  745 KADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLAFILCDIPLPLGTVTILCIDLGTDMVPAISLAYEHAEADIMKRPP 854          
The following BLAST results are available for this feature:
BLAST of FC929653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
AT1A1_CHICK1.357e-1331.43Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A1_CANFA1.357e-1331.43Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A_TAESO2.314e-1332.53Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A_HYDAT5.155e-1334.17Sodium/potassium-transporting ATPase subunit alpha... [more]
ATN5_YEAST6.733e-1337.72Sodium transport ATPase 5 OS=Saccharomyces cerevis... [more]
ATN2_YEAST6.733e-1337.72Sodium transport ATPase 2 OS=Saccharomyces cerevis... [more]
ATN1_YEAST6.733e-1337.72Sodium transport ATPase 1 OS=Saccharomyces cerevis... [more]
AT1B_ARTSF6.733e-1334.17Sodium/potassium-transporting ATPase subunit alpha... [more]
ATC3_SCHPO8.793e-1332.17Calcium-transporting ATPase 3 OS=Schizosaccharomyc... [more]
ATNA_DROME1.959e-1236.36Sodium/potassium-transporting ATPase subunit alpha... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2DF06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2DF06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929653 ID=FC929653; Name=FC929653; organism=Citrus clementina; type=EST; length=809bp
GATGGCACTAATGATGCTCCTGCCCTACATGAGGTGAAATGGATGTGATT
CTACTTTGATATTTTATATTCTTACATGACAGTGTATTTAAAATTTCTGT
TTCATCGTCAATGTTTTTAAATCATCTGGACTACTAAAACAGTTTCGTAT
TGGAGTTAAACAAGTCAGGGTAGGTCCTGGCAACATGCACTAAATATGAT
ATTATAGCTAACGGAATTAAGTCATTTTGAAATTCAAGCAGACATTGGTC
TGACAATGGGTATTCAAAGAACCGAGGTTGCTAAATAGAGCTCAAATATT
ATTATCTTGGACGACAATTTTGCTTCAGTTGTGAAGGTTGTCAGATGGGG
TCGTTCTGTATATGCAAATATCCAGAAATTCATCCAGTTTCAACTTACTG
TCAATGTCGCATCTCTCGTCATTAATTTTGTGGCTGCTGTTTCCTCTGGT
GATGTTCCCCTCAATGCAGTGCAGCTTCTCTGGGTTAACCTCATCATGGA
TACCCTGGGAGCCTTAGCCTTGGCTACTGAACCACCAACTGATCACCTGA
TGCATAGGTCCCCAGTTGGTCGAATAGAACCTCTTATAACTAATATAATG
TGGAGGAATCTCTTAATACAGGCTTCCTACCAAGTAAGTGTCCTGCTTGT
CCTGAATTTTCAAGGGAAGAGGATTCTGAACCTGGAGAGTGATTCCGATG
CCCATTCCAACACAGTATAAAATACTCAGATATTCAATTCTTTTGTCCTT
TGCCAGGTTAGTAAATTATCACGGAATACAATAATTTGTTAAGTCGAGCT
TCTGTTTGT
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