FC929653

Overview
NameFC929653
Unique NameFC929653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT2A2_RAT (Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus GN=Atp2a2 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.549e-17
Identity = 50/132 (37.88%), Postives = 79/132 (59.85%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASY 630
            +++IG+ MG   T VAK +S +++ DDNF+++V  V  GR++Y N+++FI++ ++ NV  +V  F+ A       L  VQLLWVNL+ D L A AL   PP   +M++ P    EPLI+  ++   L    Y
Sbjct:  712 KSEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCY 842          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT2A2_PIG (Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Sus scrofa GN=ATP2A2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.549e-17
Identity = 50/132 (37.88%), Postives = 79/132 (59.85%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASY 630
            +++IG+ MG   T VAK +S +++ DDNF+++V  V  GR++Y N+++FI++ ++ NV  +V  F+ A       L  VQLLWVNL+ D L A AL   PP   +M++ P    EPLI+  ++   L    Y
Sbjct:  712 KSEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCY 842          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT2A2_MOUSE (Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus GN=Atp2a2 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.549e-17
Identity = 50/132 (37.88%), Postives = 79/132 (59.85%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASY 630
            +++IG+ MG   T VAK +S +++ DDNF+++V  V  GR++Y N+++FI++ ++ NV  +V  F+ A       L  VQLLWVNL+ D L A AL   PP   +M++ P    EPLI+  ++   L    Y
Sbjct:  712 KSEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCY 842          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT2A2_FELCA (Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Felis catus GN=ATP2A2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.549e-17
Identity = 50/132 (37.88%), Postives = 79/132 (59.85%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASY 630
            +++IG+ MG   T VAK +S +++ DDNF+++V  V  GR++Y N+++FI++ ++ NV  +V  F+ A       L  VQLLWVNL+ D L A AL   PP   +M++ P    EPLI+  ++   L    Y
Sbjct:  712 KSEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCY 842          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT2A2_CANFA (Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Canis familiaris GN=ATP2A2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.549e-17
Identity = 50/132 (37.88%), Postives = 79/132 (59.85%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASY 630
            +++IG+ MG   T VAK +S +++ DDNF+++V  V  GR++Y N+++FI++ ++ NV  +V  F+ A       L  VQLLWVNL+ D L A AL   PP   +M++ P    EPLI+  ++   L    Y
Sbjct:  712 KSEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCY 842          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT2A1_BOVIN (Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Bos taurus GN=ATP2A1 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.549e-17
Identity = 51/132 (38.64%), Postives = 78/132 (59.09%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASY 630
            +A+IG+ MG   T VAK +S +++ DDNF+++V  V  GR++Y N+++FI++ ++ NV  +V  F+ A       L  VQLLWVNL+ D L A AL   PP   +M R P    EPLI+  ++   +    Y
Sbjct:  712 KAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRTPKEPLISGWLFFRYMAIGGY 842          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT2A3_HUMAN (Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Homo sapiens GN=ATP2A3 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.022e-17
Identity = 52/129 (40.31%), Postives = 80/129 (62.02%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITN-IMWRNLLI 618
            +A+IG+ MG   T VAK ++ +++ DDNFAS+V  V  GR++Y+N+++FI++ ++ NV  +V  F+ A+      L  VQLLWVNL+ D L A AL   PP   +M + P    E LI+  + +R L I
Sbjct:  713 KAEIGIAMG-SGTAVAKSAAEMVLSDDNFASIVAAVEEGRAIYSNMKQFIRYLISSNVGEVVCIFLTAILGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMEKLPRSPREALISGWLFFRYLAI 840          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT2A3_CHICK (Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Gallus gallus GN=ATP2A3 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.641e-17
Identity = 51/129 (39.53%), Postives = 80/129 (62.02%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITN-IMWRNLLI 618
            +A+IG+ MG   T VAK ++ +++ DDNF+++V  V  GR++Y N+++FI++ ++ NV  +V  F+ A+      L  VQLLWVNL+ D L A AL   PP   +M + P    EPLI+  + +R L I
Sbjct:  713 KAEIGIAMG-SGTAVAKSAAEMVLSDDNFSTIVSAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAILGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKLPRNPKEPLISGWLFFRYLAI 840          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT2A3_MOUSE (Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Mus musculus GN=Atp2a3 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.450e-17
Identity = 52/129 (40.31%), Postives = 79/129 (61.24%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITN-IMWRNLLI 618
            +A+IG+ MG   T VAK ++ +++ DDNFAS+V  V  GR++Y N+++FI++ ++ NV  +V  F+ A+      L  VQLLWVNL+ D L A AL   PP   +M + P    E LI+  + +R L I
Sbjct:  713 KAEIGIAMG-SGTAVAKSAAEMVLSDDNFASIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAILGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMEKPPRNPREALISGWLFFRYLAI 840          
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: AT2A3_RAT (Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus GN=Atp2a3 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.506e-17
Identity = 52/129 (40.31%), Postives = 79/129 (61.24%), Query Frame = 1
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITN-IMWRNLLI 618
            +A+IG+ MG   T VAK ++ +++ DDNFAS+V  V  GR++Y N+++FI++ ++ NV  +V  F+ A+      L  VQLLWVNL+ D L A AL   PP   +M + P    E LI+  + +R L I
Sbjct:  713 KAEIGIAMG-SGTAVAKSAAEMVLSDDNFASIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAILGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMEKLPRNPREALISGWLFFRYLAI 840          
The following BLAST results are available for this feature:
BLAST of FC929653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
AT2A2_RAT1.549e-1737.88Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A2_PIG1.549e-1737.88Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A2_MOUSE1.549e-1737.88Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A2_FELCA1.549e-1737.88Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A2_CANFA1.549e-1737.88Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A1_BOVIN1.549e-1738.64Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A3_HUMAN2.022e-1740.31Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A3_CHICK2.641e-1739.53Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A3_MOUSE3.450e-1740.31Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A3_RAT4.506e-1740.31Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2DF06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2DF06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929653 ID=FC929653; Name=FC929653; organism=Citrus clementina; type=EST; length=809bp
GATGGCACTAATGATGCTCCTGCCCTACATGAGGTGAAATGGATGTGATT
CTACTTTGATATTTTATATTCTTACATGACAGTGTATTTAAAATTTCTGT
TTCATCGTCAATGTTTTTAAATCATCTGGACTACTAAAACAGTTTCGTAT
TGGAGTTAAACAAGTCAGGGTAGGTCCTGGCAACATGCACTAAATATGAT
ATTATAGCTAACGGAATTAAGTCATTTTGAAATTCAAGCAGACATTGGTC
TGACAATGGGTATTCAAAGAACCGAGGTTGCTAAATAGAGCTCAAATATT
ATTATCTTGGACGACAATTTTGCTTCAGTTGTGAAGGTTGTCAGATGGGG
TCGTTCTGTATATGCAAATATCCAGAAATTCATCCAGTTTCAACTTACTG
TCAATGTCGCATCTCTCGTCATTAATTTTGTGGCTGCTGTTTCCTCTGGT
GATGTTCCCCTCAATGCAGTGCAGCTTCTCTGGGTTAACCTCATCATGGA
TACCCTGGGAGCCTTAGCCTTGGCTACTGAACCACCAACTGATCACCTGA
TGCATAGGTCCCCAGTTGGTCGAATAGAACCTCTTATAACTAATATAATG
TGGAGGAATCTCTTAATACAGGCTTCCTACCAAGTAAGTGTCCTGCTTGT
CCTGAATTTTCAAGGGAAGAGGATTCTGAACCTGGAGAGTGATTCCGATG
CCCATTCCAACACAGTATAAAATACTCAGATATTCAATTCTTTTGTCCTT
TGCCAGGTTAGTAAATTATCACGGAATACAATAATTTGTTAAGTCGAGCT
TCTGTTTGT
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