FC929660
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929660 vs. ExPASy Swiss-Prot
Match: SYM1_NEUCR (Protein sym-1 OS=Neurospora crassa GN=sym-1 PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.600e-12 Identity = 52/172 (30.23%), Postives = 80/172 (46.51%), Query Frame = 1 Query: 178 LQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLT---GIXXXXXXXXXXXVLFGCAYLGPFRHFLHLILDK-IFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYG--VVVEGRPWRDVKTKIKKDYPTVQYTSWTFWPVVGWINHLYVPLQFRVIFHSLVAMCWGIFLN 675 L Y QL PL T+A+T +L + D+ AQ+L G+ VL+G A GP L K + T+ +V +Q +P I+ G V+EG DVK K++K+Y T+W WP V +N VPL RV+F +++++ W +L+ Sbjct: 2 LSWYKAQLAARPLLTQAVTTSILFGVGDVAAQQLVDRRGLSNHDLTRTGRMVLYGGAVFGPAATTWFRFLQKRVVVPGSTNKTILARVAADQGLFAP---TFIGIFLGSMAVLEGT---DVKEKLQKNYWEALSTNWMVWPFVQMVNFKVVPLDHRVLFVNVISIGWNCYLS 167
BLAST of FC929660 vs. ExPASy Swiss-Prot
Match: PX24B_DICDI (PXMP2/4 family protein 2 OS=Dictyostelium discoideum GN=DDB_G0278529 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.565e-12 Identity = 51/188 (27.13%), Postives = 87/188 (46.28%), Query Frame = 1 Query: 187 YLIQLQQHPLRTKAITAGVLSAISDIVAQKLT-------GIXXXXXXXXXXXVLFGCAYLGPFRHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTFWPVVGWINHLYVPLQFRVIFHSLVAMCWGIFLNLRALPKAK*LENINMHVS 729 YL L HPL TK+++ G L DI+AQ+L G Y GP H+ + LD + KG+ S + KK++++QL +P FM + ++++ K+ + V+ +W WP IN VP RV++ S++++ WG+FL+ + K + N N ++ Sbjct: 8 YLGLLDNHPLVTKSLSTGFLMGTGDILAQRLEHKFKDEKSQFKLDYKRVATMSTVGIFYSGPMLHYWYRSLDIMVKGE-GRSVIIKKMLIDQLLFAPVAIGGFMTVTNFINNKGELKNLENFTKELFYAVKI-NWLIWPAAQIINFSLVPPNLRVLYSSIISIFWGMFLSHISFDKDHHIRNQNKEIN 193
BLAST of FC929660 vs. ExPASy Swiss-Prot
Match: MPV17_BOVIN (Protein Mpv17 OS=Bos taurus GN=MPV17 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.565e-12 Identity = 45/169 (26.63%), Postives = 80/169 (47.34%), Query Frame = 1 Query: 187 YLIQLQQHPLRTKAITAGVLSAISDIVAQKLT---GIXXXXXXXXXXXVLFGCAYLGPFRHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTFWPVVGWINHLYVPLQFRVIFHSLVAMCWGIFLNLRA 684 Y L HP + + +TAG L + D+++Q+L G+ GC ++GP + +LD++ G + KK++L+Q +P F+ G + G +D K+++D+P T++ WP V N VPL +R+ VA+ W +L+ +A Sbjct: 7 YQRALTAHPWKVQVLTAGSLMGLGDVISQQLVERRGLQAHQAGRTLTMASLGCGFVGPVVGGWYRVLDRLIPGTTKVDAL-KKMLLDQGGFAPCFLGCFLPLVGTL-NGLSAQDNWAKLQRDFPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVIWNSYLSWKA 173 The following BLAST results are available for this feature:
BLAST of FC929660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929660 ID=FC929660; Name=FC929660; organism=Citrus clementina; type=EST; length=845bpback to top |