FC929684

Overview
NameFC929684
Unique NameFC929684
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length789
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.101e-20
Identity = 53/135 (39.26%), Postives = 83/135 (61.48%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADE-IIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMKEKLK---WGIRYKIALGVAEGLLYLHEGC 789
            +++S+ +LQ AT +FS +NL+G+G +  VY+    +G+++A+K++        +  DF+  +  +A++DHPN  KL+GY  E G H+V+ E   NGSL   L+  +E+ K   W  R KIALG A  L YLHE C
Sbjct:  402 RLYSVADLQIATGSFSVDNLLGEGTFGRVYRAEFDDGKVLAVKKIDSSALPHGMTDDFIEMVSKIANLDHPNVTKLVGYCAEHGQHLVVYEFHKNGSLHDFLHLSEEESKALVWNSRVKIALGTARALEYLHEVC 536          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.101e-20
Identity = 55/129 (42.64%), Postives = 80/129 (62.02%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHE 783
            F L  +  AT++FS EN +G+GG+  VYKG   NGQ VA+KRLT+G+    + +F +E+ ++  + H N  KLLG+  EG   I V E  PN SL   ++   ++  L W +R++I  G+A GLLYLHE
Sbjct:  336 FDLGMIVMATDDFSSENTLGQGGFGTVYKGTFPNGQEVAVKRLTKGSGQGDM-EFKNEVSLLTRLQHKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEDKRSLLTWEVRFRIIEGIARGLLYLHE 463          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.101e-20
Identity = 60/140 (42.86%), Postives = 86/140 (61.43%), Query Frame = 1
Query:  373 NSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHE 783
            +S N QS  + F L  + +ATNNFS EN +G+GG+  VYKG L +GQ +A+KRL +G+    + +F +E+ ++  + H N  KLLG+  E    I V E  PN SL   ++  +++  L W +RY I  GVA GLLYLHE
Sbjct:  323 DSNNGQSMLR-FDLRMIVTATNNFSLENKLGQGGFGSVYKGILPSGQEIAVKRLRKGSGQGGM-EFKNEVLLLTRLQHRNLVKLLGFCNEKDEEILVYEFVPNSSLDHFIFDEEKRRVLTWDVRYTIIEGVARGLLYLHE 460          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 5.465e-20
Identity = 58/129 (44.96%), Postives = 80/129 (62.02%), Query Frame = 1
Query:  403 IFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKE-KLKWGIRYKIALGVAEGLLYLHE 783
            IF+  EL+SAT +F   N +G+GG+  VYKG L +G++VA+K L+ G+  +    F++E+  ++ V H N  KL G   EG    +V E  PNGSL   L+G K   L W  RY+I LGVA GL+YLHE
Sbjct:  681 IFTYSELKSATQDFDPSNKLGEGGFGPVYKGNLNDGRVVAVKLLSVGSR-QGKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALFGDKTLHLDWSTRYEICLGVARGLVYLHE 808          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 5.465e-20
Identity = 63/169 (37.28%), Postives = 98/169 (57.99%), Query Frame = 1
Query:  286 LLTLYPLKLSIRRSSSMREGIDMPRNLFVNSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHE 783
            L+ ++ ++   +R+ + +E +    N    + + Q     F    +++ATN F   N +G+GG+ EVYKG L +G  VA+KRL++ T+ +   +F +E+ ++A + H N  KLLGY +EG   I V E  PN SL   L+   MK KL W  RYKI  G+A G+LYLH+
Sbjct:  279 LVAVFSVRAKNKRTLNEKEPVAEDGNDITTAGSLQ-----FDFKAIEAATNCFLPINKLGQGGFGEVYKGTLSSGLQVAVKRLSK-TSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLFDSTMKMKLDWTRRYKIIGGIARGILYLHQ 441          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.321e-20
Identity = 52/131 (39.69%), Postives = 83/131 (63.36%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKE----KLKWGIRYKIALGVAEGLLYLHE 783
            F+L ++++AT+NF     IG+GG+  VYKG L  G+L+A+K+L+   + +   +F++E+G+++ + HPN  KL G  +EG  + +V E   N  L+  L+G  E    KL W  R KI LG+A+GL +LHE
Sbjct:  666 FTLRQIKAATDNFDVTRKIGEGGFGSVYKGELSEGKLIAVKQLS-AKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHE 795          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.321e-20
Identity = 54/133 (40.60%), Postives = 81/133 (60.90%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSEL-GIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMKEKLK---WGIRYKIALGVAEGLLYLHEGC 789
            +++ +LQ ATN+FS +NL+G+G +  VY+ +  +G+++A+K++         AD  +E+   +AH+DH N  KL GY  E G H+V+ E   NGSL   L+  +E+ K   W  R KIALG A  L YLHE C
Sbjct:  407 YTVSDLQVATNSFSVDNLLGEGTFGRVYRAQFEDGKVLAVKKIDSSALPTDTADDFTEIVSKIAHLDHENVTKLDGYCSEHGQHLVVYEFHRNGSLHDFLHLAEEESKPLIWNPRVKIALGTARALEYLHEVC 539          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.321e-20
Identity = 56/129 (43.41%), Postives = 78/129 (60.47%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHE 783
            F L  +  ATN FS EN +G+GG+  VYKG L +GQ +A+KRL  G+    + +F +E+ ++  + H N  KLLG+  EG   I V E  PN SL   ++   ++  L W +RY+I  GVA GLLYLHE
Sbjct:  328 FDLGMILIATNEFSLENKLGQGGFGSVYKGILPSGQEIAVKRLAGGSGQGEL-EFKNEVLLLTRLQHRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFIFDEDKRWLLTWDVRYRIIEGVARGLLYLHE 455          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.217e-19
Identity = 57/128 (44.53%), Postives = 79/128 (61.72%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKE-KLKWGIRYKIALGVAEGLLYLHE 783
            F+  EL+SAT +F   N +G+GG+  VYKG+L +G+ VA+K L+ G+  +    F++E+  ++ V H N  KL G   EG    +V E  PNGSL   L+G K   L W  RY+I LGVA GL+YLHE
Sbjct:  681 FTYSELKSATQDFDPSNKLGEGGFGPVYKGKLNDGREVAVKLLSVGSR-QGKGQFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALFGEKTLHLDWSTRYEICLGVARGLVYLHE 807          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.590e-19
Identity = 53/124 (42.74%), Postives = 81/124 (65.32%), Query Frame = 1
Query:  421 LQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHE 783
            +Q+ATN+F+  N IG+GG+ EVYKG   NG+ VA+KRL++ +  +  A+F +E+ ++A + H N  +LLG+ ++G   I V E  PN SL  LL+    + +L W  RY I  G+A G+LYLH+
Sbjct:  346 IQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSKNSR-QGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQTQLDWMQRYNIIGGIARGILYLHQ 468          
The following BLAST results are available for this feature:
BLAST of FC929684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
SRF6_ARATH1.101e-2039.26Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsi... [more]
CRK40_ARATH1.101e-2042.64Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
CRK37_ARATH1.101e-2042.86Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
Y1561_ARATH5.465e-2044.96Probable LRR receptor-like serine/threonine-protei... [more]
CRK19_ARATH5.465e-2037.28Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
Y1765_ARATH9.321e-2039.69Probable LRR receptor-like serine/threonine-protei... [more]
SRF7_ARATH9.321e-2040.60Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
CRK36_ARATH9.321e-2043.41Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
Y5614_ARATH1.217e-1944.53Probable LRR receptor-like serine/threonine-protei... [more]
CRK8_ARATH1.590e-1942.74Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1BA07RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1BA07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929684 ID=FC929684; Name=FC929684; organism=Citrus clementina; type=EST; length=789bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAATAAACACA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAATAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTACTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACAATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGT
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