FC929684

Overview
NameFC929684
Unique NameFC929684
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length789
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.393e-15
Identity = 62/182 (34.07%), Postives = 94/182 (51.65%), Query Frame = 1
Query:  247 LFYDLFRNKSKKSLLTLYPLKLSIRRSSSMREGIDMPRNLFVNSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLH 780
            LF+  +R+KS    +TL     +   ++++   +    + F+ S +     K F+L  ++ AT  +  + LIG+GG+  VY+G L +GQ VA+K +   T+ +   +F +EL +++ + H N   LLGY  E    I V     NGSL   LYG   K   L W  R  IALG A GL YLH
Sbjct:  541 LFFCRYRHKS----ITLEGFGKTYPMATNIIFSLPSKDDFFIKSVSV----KPFTLEYIEQATEQY--KTLIGEGGFGSVYRGTLDDGQEVAVK-VRSSTSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLH 711          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.819e-15
Identity = 55/164 (33.54%), Postives = 92/164 (56.10%), Query Frame = 1
Query:  301 PLKLSIRRSSSMREGIDMPRNLFVNSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIE-GGMHIVLELSPNGSLASLLYGMK-EKLKWGIRYKIALGVAEGLLYLHEG 786
            PL L +  S++  +      +L +N+  + +  + F+L E+++AT NF     IG GG+ +VY+G L +G L+AIKR T   + + +A+F +E+ +++ + H +   L+G+  E   M +V E   NG+L S L+G     L W  R +  +G A GL YLH G
Sbjct:  475 PLFLHVNNSTANAKATG--GSLRLNTLAASTMGRKFTLAEIRAATKNFDDGLAIGVGGFGKVYRGELEDGTLIAIKRAT-PHSQQGLAEFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLFGSNLPPLSWKQRLEACIGSARGLHYLHTG 635          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.376e-15
Identity = 51/133 (38.35%), Postives = 80/133 (60.15%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNG-QLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKE----KLKWGIRYKIALGVAEGLLYLHEG 786
            FS++E++SATN+F  + +IG GG+  VYKG++  G  LVA+KRL   T+++   +F +EL +++ + H +   L+GY  E   M +V E  P+G+L   L+   +     L W  R +I +G A GL YLH G
Sbjct:  506 FSIFEIKSATNDFEDKLIIGVGGFGSVYKGQIDGGATLVAVKRL-EITSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTG 637          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: Y1839_ARATH (Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.376e-15
Identity = 61/185 (32.97%), Postives = 92/185 (49.73%), Query Frame = 1
Query:  241 WHLFYDLFRNKSKKSLLTLYPLKLSIRRSSSMREGIDMPRNLFVNSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL--ELSPNGSLASLLYGMK---EKLKWGIRYKIALGVAEGLLYLH 780
            W++++   + KS ++   L P  +S   S+   + I+    L V  +       IFS  EL+ ATNNF     +G GG+  VY G+L++G+ VA+KRL           F +E+ I+  + HPN   L G   +    ++L  E   NG+LA  L+G +     L W IR KIA+  A  L YLH
Sbjct:  286 WYVYHRR-KTKSYRNSSALLPRNISSDPSAKSFD-IEKAEELLVGVH-------IFSYEELEEATNNFDPSKELGDGGFGTVYYGKLKDGRSVAVKRLYDNNFKR-AEQFRNEVEILTGLRHPNLVALFGCSSKQSRDLLLVYEYVANGTLADHLHGPQANPSSLPWSIRLKIAVETASALKYLH 460          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.376e-15
Identity = 51/135 (37.78%), Postives = 73/135 (54.07%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRL-TRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYG---MKEKLKWGIRYKIALGVAEGLLYLHEGC 789
            K +S+  LQ  T +F+ ENLIG G    VY+ RL NG+L A+K+L  R +  +   +F+  +  +  + H N  +L+GY  E     +V E   NG+L   L+     K+KL W  R  +ALG A  L YLHE C
Sbjct:  471 KHYSIASLQQYTESFAQENLIGSGMLGSVYRARLPNGKLFAVKKLDKRASEQQQDHEFIELVNNIDMIRHSNIVELVGYCAEHDQRLLVYEYCSNGTLQDGLHSDDEFKKKLSWNTRVSMALGAARALEYLHEVC 605          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.376e-15
Identity = 54/158 (34.18%), Postives = 82/158 (51.90%), Query Frame = 1
Query:  328 SSMREGIDMPRNLFVNSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMKE---KLKWGIRYKIALGVAEGLLYLHEGC 789
            S +  G D   +L +   NS+   K  +++EL  AT+NFS  N+IG GG+  VYK  L NG  +A+K+LT G    +  +F +E+ +++   H N   L GY +     I++     NGSL   L+   E   +L W  R  I  G + GL Y+H+ C
Sbjct:  765 SEVPPGSDKDISLVLLFGNSRYEVKDLTIFELLKATDNFSQANIIGCGGFGLVYKATLDNGTKLAVKKLT-GDYGMMEKEFKAEVEVLSRAKHENLVALQGYCVHDSARILIYSFMENGSLDYWLHENPEGPAQLDWPKRLNIMRGASSGLAYMHQIC 921          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.376e-15
Identity = 49/141 (34.75%), Postives = 77/141 (54.61%), Query Frame = 1
Query:  379 YNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLLYGMKE---KLKWGIRYKIALGVAEGLLYLHEGC 789
            ++++      SL ++  +T++F+  N+IG GG+  VYK  L +G  VAIKRL+ G   ++  +F +E+  ++   HPN   LLGY   +    ++     NGSL   L+   +    L W  R +IA G AEGL YLH+ C
Sbjct:  722 FHNKDSNNELSLDDILKSTSSFNQANIIGCGGFGLVYKATLPDGTKVAIKRLS-GDTGQMDREFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQSC 861          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.376e-15
Identity = 54/145 (37.24%), Postives = 76/145 (52.41%), Query Frame = 1
Query:  364 LFVNSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLL---YGMKEKLKWGIRYKIALGVAEGLLYLHEG 786
            L +N    + P     L ++  AT++FS +N+IG GG+  VYK  L   + VA+K+L+     +   +F++E+  +  V HPN   LLGY        +V E   NGSL   L    GM E L W  R KIA+G A GL +LH G
Sbjct:  891 LSINIAMFEQPLLKVRLGDIVEATDHFSKKNIIGDGGFGTVYKACLPGEKTVAVKKLSEAKT-QGNREFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHG 1034          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.376e-15
Identity = 48/129 (37.21%), Postives = 77/129 (59.69%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKE-KLKWGIRYKIALGVAEGLLYLHEG 786
            FSL E++  T NF   N+IG GG+ +VYKG +     VA+K+ +   +++ + +F +E+ +++ + H +   L+GY  EGG M +V +    G+L   LY  K+ +L W  R +IA+G A GL YLH G
Sbjct:  505 FSLPEIKHGTQNFDDSNVIGVGGFGKVYKGVIDGTTKVAVKK-SNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLVYDYMAFGTLREHLYNTKKPQLTWKRRLEIAIGAARGLHYLHTG 632          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: ACCR2_ARATH (Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.376e-15
Identity = 54/129 (41.86%), Postives = 69/129 (53.49%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGT-ADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLH 780
            KIF L EL+ AT+ F   N +G+G +  VYK  L +G  VA+KR    T        F SEL I+  + H N   LLGY  E G   +V E  P+G+L   L+G   +L W +R KI L  A GL YLH
Sbjct:  505 KIFRLSELKDATHGFKEFNELGRGSFGFVYKAVLSDGIHVAVKRANAATIIHSNNRGFESELEILCKIRHNNIVNLLGYCSEMGERLLVYEYMPHGTLHDHLHGDLSQLDWSMRLKIMLQAARGLDYLH 633          
The following BLAST results are available for this feature:
BLAST of FC929684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
NORK_MEDTR1.393e-1534.07Nodulation receptor kinase OS=Medicago truncatula ... [more]
Y1357_ARATH1.819e-1533.54Probable receptor-like protein kinase At1g30570 OS... [more]
Y5900_ARATH2.376e-1538.35Putative receptor-like protein kinase At5g39000 OS... [more]
Y1839_ARATH2.376e-1532.97Probable serine/threonine-protein kinase At1g18390... [more]
SRF3_ARATH2.376e-1537.78Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsi... [more]
PSYR1_ARATH2.376e-1534.18Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
PSKR1_DAUCA2.376e-1534.75Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
EXS_ARATH2.376e-1537.24Leucine-rich repeat receptor protein kinase EXS OS... [more]
ANX1_ARATH2.376e-1537.21Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
ACCR2_ARATH2.376e-1541.86Serine/threonine-protein kinase-like protein CCR2 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1BA07RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1BA07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929684 ID=FC929684; Name=FC929684; organism=Citrus clementina; type=EST; length=789bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAATAAACACA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAATAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTACTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACAATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGT
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