FC929684

Overview
NameFC929684
Unique NameFC929684
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length789
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.103e-15
Identity = 53/150 (35.33%), Postives = 82/150 (54.67%), Query Frame = 1
Query:  361 NLFVNSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEG-GMHIVLELSPNGSLASLLYGMKEK-------LKWGIRYKIALGVAEGLLYLHEG 786
            N F + +++Q   + F   ELQ+AT NF    + G GG+ +VY G +  G  VAIKR ++ ++++ I +F +E+ +++ + H +   L+G+  E   M +V E   NG L   LYG KE        L W  R +I +G A GL YLH G
Sbjct:  498 NGFSSFFSNQGLGRYFPFTELQTATQNFDENAVCGVGGFGKVYIGEIDGGTQVAIKRGSQ-SSEQGINEFQTEIQMLSKLRHRHLVSLIGFCDENKEMILVYEYMSNGPLRDHLYGSKENDPNPIPTLSWKQRLEICIGSARGLHYLHTG 646          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.103e-15
Identity = 54/141 (38.30%), Postives = 74/141 (52.48%), Query Frame = 1
Query:  373 NSYNSQ-SPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMK-EKLKWGIRYKIALGVAEGLLYLHEG 786
            N YNS     + FSL ELQ  T NF    +IG GG+  VY G + +G  VAIKR     +++ I +F +E+ +++ + H +   L+GY  E   M +V E   NG     LYG     L W  R +I +G A GL YLH G
Sbjct:  501 NLYNSALGLGRYFSLSELQEVTKNFDASEIIGVGGFGNVYIGTIDDGTQVAIKR-GNPQSEQGITEFHTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEYMSNGPFRDHLYGKNLSPLTWKQRLEICIGAARGLHYLHTG 640          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.103e-15
Identity = 52/135 (38.52%), Postives = 80/135 (59.26%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTR-GTADEIIADFLSELGIMA-----HVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGC 789
            F+  ++  AT+NFS E ++G+GGY  VY+G L +G+ VA+K+L R GT  E   +F +E+ +++        HPN  +L G+ ++G   I++ E    GSL  L+   K KL+W  R  IA  VA GL++LH  C
Sbjct:  802 FTYADILKATSNFSEERVVGRGGYGTVYRGVLPDGREVAVKKLQREGTEAE--KEFRAEMEVLSANAFGDWAHPNLVRLYGWCLDGSEKILVHEYMGGGSLEELITD-KTKLQWKKRIDIATDVARGLVFLHHEC 933          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.103e-15
Identity = 67/229 (29.26%), Postives = 107/229 (46.72%), Query Frame = 1
Query:  148 LEDYFRSEDSETCSSK*PCSETKPESKSNSRWHLFYDLFRNKSKKSLLTLYPLKLSIRRSSSMREGIDMPRNLFVNSYNSQSPQK---IFS--------LYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLHEGC 789
            LE    SE S    +   C      + +NSR  L Y   ++KS+KS L+ + + L    SS +   + +             P+K   +F+        L ++ +AT+N + +  IG+G +  VY+  L +G++ A+KRL   +        + E+  +  V H N  KL G+ +     ++L    P GSL  +L+G+  K   L W  RY +ALGVA GL YLH  C
Sbjct:  718 LEGQLLSEPSSFSGNPNLCIPHSFSASNNSRSALKYCKDQSKSRKSGLSTWQIVLIAVLSSLLVLVVVLALVFICLRRRKGRPEKDAYVFTQEEGPSLLLNKVLAATDNLNEKYTIGRGAHGIVYRASLGSGKVYAVKRLVFASHIRANQSMMREIDTIGKVRHRNLIKLEGFWLRKDDGLMLYRYMPKGSLYDVLHGVSPKENVLDWSARYNVALGVAHGLAYLHYDC 946          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.103e-15
Identity = 64/176 (36.36%), Postives = 92/176 (52.27%), Query Frame = 1
Query:  283 SLLTLYPLKLSIRRSSSMREGIDMPRNLFVNSYNSQSPQKIFSLYE-LQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRL---TRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLHEG 786
            S+LT     +S RR S  R+              +Q P  +   YE L+ AT +F     +G+GG   VYKG L +G++VA+K+L   TR  AD+    F +E+ +++ V H N  +LLG  IEG    +V E   N SL  +L+ MK     L W  R+ I +G++EGL YLH G
Sbjct:  278 SILTSLGAFISYRRVSRKRK--------------AQVPSCVNFKYEMLEKATESFHDSMKLGQGGAGSVYKGILPDGRIVAVKKLFFNTREWADQ----FFNEVNLISGVQHKNLVRLLGCSIEGPKSLLVYEYVHNRSLDQILF-MKNTVHILSWKQRFNIIIGISEGLEYLHRG 434          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.103e-15
Identity = 48/131 (36.64%), Postives = 78/131 (59.54%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGT-ADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYG----MKEKLKWGIRYKIALGVAEGLLYLH 780
            FS  EL+ AT  FS ++ +GKG ++ V+KG LR+G +VA+KR  + +   +   +F +EL +++ ++H +   LLGY  +G    +V E   +GSL   L+G    +K++L W  R  IA+  A G+ YLH
Sbjct:  493 FSYEELEQATGGFSEDSQVGKGSFSCVFKGILRDGTVVAVKRAIKASDVKKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLH 623          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.103e-15
Identity = 49/133 (36.84%), Postives = 79/133 (59.40%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKR-LTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYG----MKEKLKWGIRYKIALGVAEGLLYLH 780
            ++F+  EL+ A + F  E+++GKG ++ VYKG LR+G  VA+KR +      +   +F +EL +++ ++H +   LLGY  E G   +V E   +GSL + L+G    +KE+L W  R  IA+  A G+ YLH
Sbjct:  498 RVFTYEELEKAADGFKEESIVGKGSFSCVYKGVLRDGTTVAVKRAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHGSLHNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLH 630          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: SRF2_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsis thaliana GN=SRF2 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.053e-15
Identity = 50/130 (38.46%), Postives = 73/130 (56.15%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTAD-EIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYG-MKEKLKWGIRYKIALGVAEGLLYLH 780
            K+FS  ELQ ATN FS ENL+G+G    VY+ +L +GQ   ++ +   +        F   L   + + HPN   LLG+ IE G H +V E   + SL + ++  + + L WG+R +IA+GVA  L YLH
Sbjct:  401 KLFSAAELQLATNCFSEENLLGEGPLGSVYRAKLPDGQFAVVRNIPMSSLSLHEEEQFTEVLQTASKLRHPNIVTLLGFCIENGEHLLVYEYVGHLSLYNAMHDEVYKPLSWGLRLRIAIGVARALDYLH 530          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.053e-15
Identity = 50/134 (37.31%), Postives = 72/134 (53.73%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMKE---KLKWGIRYKIALGVAEGLLYLHEGC 789
            K  S+ EL  +TNNFS  N+IG GG+  VYK    +G   A+KRL+ G   ++  +F +E+  ++  +H N   L GY   G   +++     NGSL   L+   +    L W +R KIA G A GL YLH+ C
Sbjct:  740 KDLSVEELLKSTNNFSQANIIGCGGFGLVYKANFPDGSKAAVKRLS-GDCGQMEREFQAEVEALSRAEHKNLVSLQGYCKHGNDRLLIYSFMENGSLDYWLHERVDGNMTLIWDVRLKIAQGAARGLAYLHKVC 872          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.293e-15
Identity = 50/133 (37.59%), Postives = 73/133 (54.89%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMK--EKLKWGIRYKIALGVAEGLLYLHEGC 789
            K F+  E+ + TNNF  + ++GKGG+  VY G +   + VA+K L+  +A      F +E+ ++  V H N   L+GY  EG  + ++ E   NG L   + G +    L WG R KIAL  A+GL YLH GC
Sbjct:  565 KKFTYAEVLTMTNNF--QKILGKGGFGIVYYGSVNGTEQVAVKMLSHSSAQGY-KQFKAEVELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANGDLDEHMSGKRGGSILNWGTRLKIALEAAQGLEYLHNGC 694          
The following BLAST results are available for this feature:
BLAST of FC929684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
Y5613_ARATH3.103e-1535.33Probable receptor-like protein kinase At5g61350 OS... [more]
Y2214_ARATH3.103e-1538.30Probable receptor-like protein kinase At2g21480 OS... [more]
Y1743_ARATH3.103e-1538.52Probable LRR receptor-like serine/threonine-protei... [more]
PEPR1_ARATH3.103e-1529.26Leucine-rich repeat receptor-like protein kinase P... [more]
CRK1_ARATH3.103e-1536.36Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]
CRI4_MAIZE3.103e-1536.64Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
ACR4_ARATH3.103e-1536.84Serine/threonine-protein kinase-like protein ACR4 ... [more]
SRF2_ARATH4.053e-1538.46Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsi... [more]
PSKR2_ARATH4.053e-1537.31Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
Y5181_ARATH5.293e-1537.59Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1BA07RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1BA07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929684 ID=FC929684; Name=FC929684; organism=Citrus clementina; type=EST; length=789bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAATAAACACA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAATAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTACTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACAATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGT
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