FC929684

Overview
NameFC929684
Unique NameFC929684
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length789
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.293e-15
Identity = 47/130 (36.15%), Postives = 80/130 (61.54%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEKLK--WGIRYKIALGVAEGLLYLH 780
            K+FS  EL+ AT+NF+   +IG+GG   VYKG L +G+ VA+K+ +    ++ + +F++E+ I++ ++H +  KLLG  +E  + I V E  PNG+L   L+   +     WG+R +IA+ ++    YLH
Sbjct:  440 KLFSSRELEKATDNFNDNRVIGQGGQGTVYKGMLVDGRSVAVKK-SNVVDEDKLQEFINEVIILSQINHRHVVKLLGCCLETEVPILVYEFIPNGNLFQHLHEEFDDYTALWGVRMRIAVDISGAFSYLH 568          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.293e-15
Identity = 66/189 (34.92%), Postives = 96/189 (50.79%), Query Frame = 1
Query:  247 LFYDLFRNKSKKSLLTL-------YPLKLSIRRSSSMREGIDMPRNLFVNSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLH 780
            LF+  +R+KS    +TL       YP+  +I  S   ++      + F+ S +     K F+L  ++ AT  +  + LIG+GG+  VY+G L +GQ VA+K +   T+ +   +F +EL +++ + H N   LLGY  E    I V     NGSL   LYG   K   L W  R  IALG A GL YLH
Sbjct:  539 LFFCRYRHKS----ITLEGFGGKTYPMATNIIFSLPSKD------DFFIKSVSV----KPFTLEYIELATEKY--KTLIGEGGFGSVYRGTLDDGQEVAVK-VRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLH 710          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.293e-15
Identity = 57/151 (37.75%), Postives = 84/151 (55.63%), Query Frame = 1
Query:  355 PRNLFVNSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMK--EK---LKWGIRYKIALGVAEGLLYLHEGC 789
            P ++ V ++  Q  +  FS  +L  ATN FS  ++IG GG+ EV+K  L++G  VAIK+L R  + +   +F++E+  +  + H N   LLGY   G    +V E    GSL  +L+G +  EK   L W  R KIA G A+GL +LH  C
Sbjct:  811 PLSINVATFQRQLRKLKFS--QLIEATNGFSAASMIGHGGFGEVFKATLKDGSSVAIKKLIR-LSCQGDREFMAEMETLGKIKHRNLVPLLGYCKIGEERLLVYEFMQYGSLEEVLHGPRTGEKRRILGWEERKKIAKGAAKGLCFLHHNC 958          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.913e-15
Identity = 48/133 (36.09%), Postives = 75/133 (56.39%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLLYGMK--EKLKWGIRYKIALGVAEGLLYLHEGC 789
            K F+  E+++ T+NF  E ++G+GG+  VY G L   Q +A+K L++ +      +F +E+ ++  V H N   L+GY   E  + ++ E +PNG L   L G +    LKW  R KI +  A+GL YLH GC
Sbjct:  561 KRFTYSEVEALTDNF--ERVLGEGGFGVVYHGILNGTQPIAVKLLSQSSVQGY-KEFKAEVELLLRVHHVNLVSLVGYCDEESNLALLYEYAPNGDLKQHLSGERGGSPLKWSSRLKIVVETAQGLEYLHTGC 690          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.913e-15
Identity = 49/130 (37.69%), Postives = 75/130 (57.69%), Query Frame = 1
Query:  409 SLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKE--KLKWGIRYKIALGVAEGLLYLHEGC 789
            SL  L+ AT+NFS +  +G+G +  VY GR+++G+ VA+K +T   +  +   F++E+ +++ + H N   L+GY  E    I V E   NGSL   L+G  +   L W  R +IA   A+GL YLH GC
Sbjct:  597 SLPVLEEATDNFSKK--VGRGSFGSVYYGRMKDGKEVAVK-ITADPSSHLNRQFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYKPLDWLTRLQIAQDAAKGLEYLHTGC 723          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: Y1570_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g05700 OS=Arabidopsis thaliana GN=At1g05700 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.913e-15
Identity = 58/152 (38.16%), Postives = 81/152 (53.29%), Query Frame = 1
Query:  358 RNLFVNSYNSQSPQK------IFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGM-KEKLKWGIRYKIALGVAEGLLYLHEGC 789
            RN  VNS    SP        +F+  ++   TNNF    ++GKGG+  VY G   N Q VA+K L+  T+ +   +F SE+ ++  V H N   L+GY  EG  M ++ E   NG++A  L G  +  L W  R +IAL  A+GL YLH GC
Sbjct:  538 RNKSVNSAPQTSPMAKSENKLLFTFADVIKMTNNFG--QVLGKGGFGTVYHGFYDNLQ-VAVKLLSE-TSAQGFKEFRSEVEVLVRVHHVNLTALIGYFHEGDQMGLIYEFMANGNMADHLAGKYQHTLSWRQRLQIALDAAQGLEYLHCGC 685          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.913e-15
Identity = 54/171 (31.58%), Postives = 89/171 (52.05%), Query Frame = 1
Query:  292 TLYPLKLSIRRSSSMREGIDMPRNLFVNSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGI-MAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLY---GMKEKLKWGIRYKIALGVAEGLLYLHEGC 789
            T +  KL+ +R++S R  ++                  F L +LQSAT NFS  NL+G+G    VY+ +  +G+ +A+K++     D   ++ ++ + + ++ + H N A+L+GY  E G + +V E   NGSL   L+      + L W  R +IALG A  + YLHE C
Sbjct:  372 TEFANKLNAKRTTSTRSAVE------------------FELSDLQSATANFSPGNLLGEGSIGRVYRAKYSDGRTLAVKKIDSTLFDSGKSEGITPIVMSLSKIRHQNIAELVGYCSEQGHNMLVYEYFRNGSLHEFLHLSDCFSKPLTWNTRVRIALGTARAVEYLHEAC 524          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.913e-15
Identity = 60/189 (31.75%), Postives = 95/189 (50.26%), Query Frame = 1
Query:  256 DLFRNKSKKSLLTLYPLKLSIRRSSSMREGIDMPRNLFVNSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRL----------RNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLY---GMKEKLKWGIRYKIALGVAEGLLYLH 780
            D+F N     L   Y L LS R+SSS            ++S    +P K F+  EL+ AT NF  +++IG+GG+  V+KG L            G ++A+K+L +    +   ++L+E+  +  + HPN  KL+GY +E     +V E    GSL + L+      + L W +R  +AL  A+GL +LH
Sbjct:   12 DIFHNGKSSDL---YGLSLSSRKSSSTVAAAQKTEGEILSS----TPVKSFTFNELKLATRNFRPDSVIGEGGFGCVFKGWLDESTLTPTKPGTGLVIAVKKLNQ-EGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLH 192          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.029e-15
Identity = 44/127 (34.65%), Postives = 75/127 (59.06%), Query Frame = 1
Query:  418 ELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLLYGMKEK----LKWGIRYKIALGVAEGLLYLHE 783
            +L  AT+ F    +IG GG+  V+KG+L N   +A+K++   ++ + + +F++E+  +  + H N   L G+   +  + ++ +  PNGSL SLLY +  +    L W  R++IA G+A GLLYLHE
Sbjct:  359 DLYVATDGFKKTGIIGTGGFGTVFKGKLPNSDPIAVKKII-PSSRQGVREFVAEIESLGKLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLYTVPRRSGAVLSWNARFQIAKGIASGLLYLHE 484          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 9.029e-15
Identity = 46/115 (40.00%), Postives = 65/115 (56.52%), Query Frame = 1
Query:  451 ENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMK-EKLKWGIRYKIALGVAEGLLYLHEGC 789
            EN+IGKGG   VY+G + N   VAIKRL           F +E+  +  + H +  +LLGY      +++L E  PNGSL  LL+G K   L+W  R+++A+  A+GL YLH  C
Sbjct:  695 ENIIGKGGAGIVYRGSMPNNVDVAIKRLVGRGTGRSDHGFTAEIQTLGRIRHRHIVRLLGYVANKDTNLLLYEYMPNGSLGELLHGSKGGHLQWETRHRVAVEAAKGLCYLHHDC 809          
The following BLAST results are available for this feature:
BLAST of FC929684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
WAKLL_ARATH5.293e-1536.15Putative wall-associated receptor kinase-like 13 O... [more]
NORK_PEA5.293e-1534.92Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
BRL2_ARATH5.293e-1537.75Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
Y2289_ARATH6.913e-1536.09Probable LRR receptor-like serine/threonine-protei... [more]
Y1677_ARATH6.913e-1537.69Probable LRR receptor-like serine/threonine-protei... [more]
Y1570_ARATH6.913e-1538.16Probable LRR receptor-like serine/threonine-protei... [more]
SRF5_ARATH6.913e-1531.58Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsi... [more]
BIK1_ARATH6.913e-1531.75Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
LRKA1_ARATH9.029e-1534.65Lectin-domain containing receptor kinase A4.1 OS=A... [more]
CLV1_ARATH9.029e-1540.00Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1BA07RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1BA07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929684 ID=FC929684; Name=FC929684; organism=Citrus clementina; type=EST; length=789bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAATAAACACA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAATAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTACTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACAATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGT
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