FC929684

Overview
NameFC929684
Unique NameFC929684
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length789
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15029 contig Ccv1_Contig15029:1..789. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.590e-19
Identity = 53/124 (42.74%), Postives = 79/124 (63.71%), Query Frame = 1
Query:  421 LQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLY--GMKEKLKWGIRYKIALGVAEGLLYLHE 783
            +++ATN FS  N IG+GG+ EVYKG   NG  VA+KRL++ ++ +   +F +E+ ++A + H N  +LLG+ I GG  I V E  PN SL   L+    + +L W  RYK+  G+A G+LYLH+
Sbjct:  330 IRAATNKFSENNKIGQGGFGEVYKGTFSNGTEVAVKRLSK-SSGQGDTEFKNEVVVVAKLQHRNLVRLLGFSIGGGERILVYEYMPNKSLDYFLFDPAKQNQLDWTRRYKVIGGIARGILYLHQ 452          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.077e-19
Identity = 53/124 (42.74%), Postives = 81/124 (65.32%), Query Frame = 1
Query:  421 LQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKE--KLKWGIRYKIALGVAEGLLYLHE 783
            +Q+ATN+F+  N IG+GG+ EVYKG   NG+ VA+KRL++ +  +  A+F +E+ ++A + H N  +LLG+ ++G   I V E  PN SL  LL+   +  +L W  RY I  G+A G+LYLH+
Sbjct:  344 IQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSKNSR-QGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQIQLDWMQRYNIIGGIARGILYLHQ 466          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.712e-19
Identity = 58/154 (37.66%), Postives = 82/154 (53.25%), Query Frame = 1
Query:  352 MPRNLFVNSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTR--GTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKEK-----LKWGIRYKIALGVAEGLLYLHEGC 789
            +P  L +N    + P +  +   L  ATN FS E ++G GG+ EVYK +LR+G +VAIK+L R  G  D    +F++E+  +  + H N   LLGY   G    +V E    GSL ++L+    K     L W  R KIA+G A GL +LH  C
Sbjct:  829 VPEPLSINVATFEKPLRKLTFAHLLEATNGFSAETMVGSGGFGEVYKAQLRDGSVVAIKKLIRITGQGDR---EFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLETVLHEKSSKKGGIYLNWAARKKIAIGAARGLAFLHHSC 979          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 4.626e-19
Identity = 56/133 (42.11%), Postives = 80/133 (60.15%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRL--TRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLY---GMKEKLKWGIRYKIALGVAEGLLYLHEG 786
            ++L EL++ATN    EN+IG+GGY  VY+G L +G  VA+K L   RG A++   +F  E+ ++  V H N  +LLGY +EG    +V +   NG+L   ++   G    L W IR  I LG+A+GL YLHEG
Sbjct:  142 YTLRELEAATNGLCEENVIGEGGYGIVYRGILTDGTKVAVKNLLNNRGQAEK---EFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEG 271          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.626e-19
Identity = 66/184 (35.87%), Postives = 101/184 (54.89%), Query Frame = 1
Query:  247 LFYDLF--RNKSKKSLLTLYPLKLSIRRSSSMREGIDMPRNLFVNSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHE 783
            LF  +F  R K +K ++   PL    R+ + + E +    +    + + Q     F    + +ATNNF   N +G+GG+ EVYKG   +G  VA+KRL++ T+ +   +F +E+ ++A + H N  +LLGY +EG   I V E   N SL   L+   MK +L W  RYKI  G+A G+LYLH+
Sbjct:  446 LFVAVFSVRTKRRKKMIGAIPLLNVKRKDTEVTEPLAENGDSITTAGSLQ-----FDFKAIVAATNNFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLSK-TSGQGEREFENEVVVVAKLQHRNLVRLLGYCLEGEEKILVYEFVHNKSLDYFLFDTTMKRQLDWTRRYKIIGGIARGILYLHQ 623          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.042e-19
Identity = 61/138 (44.20%), Postives = 81/138 (58.70%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEII---ADFLSELGIMAHVDHPNTAKLLGYGI--EGGMHIVLELSPNGSLASLL---YGMKEKLKWGIRYKIALGVAEGLLYLHEGC 789
            K FS  E+Q+AT+NFS +N++G+GG+  VYKG L NG +VA+KRL     D I      F +E+ ++    H N  +L G+ +  E  M +V    PNGS+A  L   YG K  L W  R  IALG A GL+YLHE C
Sbjct:  286 KRFSFREIQTATSNFSPKNILGQGGFGMVYKGYLPNGTVVAVKRL----KDPIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTPEERM-LVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQC 418          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.042e-19
Identity = 58/134 (43.28%), Postives = 80/134 (59.70%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-----GIEGGMHIVL-ELSPNGSLASLLYG-MKEKLKWGIRYKIALGVAEGLLYLHEG 786
            FS  E++ ATNNFS  N+IG+GGY  V+KG L +G  VA KR    +A    A+F  E+ ++A + H N   L GY       EG   I++ +L  NGSL   L+G ++ +L W +R +IALG+A GL YLH G
Sbjct:  271 FSFDEIKKATNNFSRHNIIGRGGYGNVFKGALPDGTQVAFKRFKNCSAGG-DANFAHEVEVIASIRHVNLLALRGYCTATTPYEGHQRIIVCDLVSNGSLHDHLFGDLEAQLAWPLRQRIALGMARGLAYLHYG 403          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.042e-19
Identity = 51/139 (36.69%), Postives = 87/139 (62.59%), Query Frame = 1
Query:  379 YNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIE-GGMHIVLELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLHE 783
            Y  + P   F+L +++ AT++F+  N IG+GG+  V+KG L +G++VA+K+L+   + +   +FL+E+G ++ + HPN  KL G+ +E   + +  E   N SL+S L+  K K   + W  R+KI  G+A+GL +LHE
Sbjct:  660 YEEELPSGTFTLRQIKFATDDFNPTNKIGEGGFGAVFKGVLADGRVVAVKQLS-SKSRQGNREFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSLSSALFSPKHKQIPMDWPTRFKICCGIAKGLAFLHE 797          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.042e-19
Identity = 70/206 (33.98%), Postives = 107/206 (51.94%), Query Frame = 1
Query:  205 SETKPESKSNSRWHLFYDLFRNKSKKSLLTLYPLKLSIRRSSSMREGIDMPRNLFVNSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKG----------RLRNGQLVAIKRL-TRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEG-GMHIVLELSPNGSLASLLYGM-KEKLKWGIRYKIALGVAEGLLYLHE 783
            S  K +S S+S       L    S K+  +  P  LSI   SS+ E +  PR        S    K F+  EL++AT NF  ++L+G+GG+  V+KG          +  +G +VA+K+L T G       ++L+E+  +  + HPN  KL+GY +EG    +V E  P GSL + L+    + L W IR K+A+G A+GL +LH+
Sbjct:    7 SSAKVDSSSHSPHANSASLSSRVSSKTSRSTVPSSLSINSYSSV-ESLPTPRT--EGEILSSPNLKAFTFNELKNATRNFRPDSLLGEGGFGYVFKGWIDGTTLTASKPGSGIVVAVKKLKTEGYQGH--KEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKVAIGAAKGLTFLHD 207          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.891e-19
Identity = 57/129 (44.19%), Postives = 76/129 (58.91%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMK--EKLKWGIRYKIALGVAEGLLYLHE 783
            FS   L+ AT+ FS +N +G+GG   VYKG L NG+ VA+KRL   T  + +  F +E+ +++ VDH N  KLLG  I G    +V E   N SL   L+  K  + L W  R+KI LG AEG+ YLHE
Sbjct:  311 FSYENLERATDYFSDKNKLGQGGSGSVYKGVLTNGKTVAVKRLFFNT-KQWVDHFFNEVNLISQVDHKNLVKLLGCSITGPESLLVYEYIANQSLHDYLFVRKDVQPLNWAKRFKIILGTAEGMAYLHE 438          
The following BLAST results are available for this feature:
BLAST of FC929684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
CRK15_ARATH1.590e-1942.74Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
CRK6_ARATH2.077e-1942.74Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
BRL1_ARATH2.712e-1937.66Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
Y1154_ARATH4.626e-1942.11Probable serine/threonine-protein kinase At1g01540... [more]
CRK23_ARATH4.626e-1935.87Putative cysteine-rich receptor-like protein kinas... [more]
Y5457_ARATH6.042e-1944.20Probable LRR receptor-like serine/threonine-protei... [more]
RKF3_ARATH6.042e-1943.28Probable LRR receptor-like serine/threonine-protei... [more]
RKF1_ARATH6.042e-1936.69Probable LRR receptor-like serine/threonine-protei... [more]
APK2B_ARATH6.042e-1933.98Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
CRK3_ARATH7.891e-1944.19Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1BA07RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1BA07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929684 ID=FC929684; Name=FC929684; organism=Citrus clementina; type=EST; length=789bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAATAAACACA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAATAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTACTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACAATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGT
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