FC929684

Overview
NameFC929684
Unique NameFC929684
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length789
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: SUB_ARATH (Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.999e-18
Identity = 54/146 (36.99%), Postives = 82/146 (56.16%), Query Frame = 1
Query:  367 FVNSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRG-TADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLY---GMKEKLKWGIRYKIALGVAEGLLYLHEGC 789
            F    NS S   +F++  LQ  TNNFS EN+IG+G    VY+  LR+G+ +A+K+L+      +   +FL+ +  +  +   +  +LLGY  E G   +V E  PNGSL   L+    + +KL W +R  IALG ++ L +LHE C
Sbjct:  472 FPPGLNSSSSATVFTIASLQQYTNNFSEENIIGEGSIGNVYRAELRHGKFLAVKKLSNTINRTQSDGEFLNLVSNVLKLKRGHILELLGYCNEFGQRLLVYEYCPNGSLQDALHLDRKLHKKLTWNVRINIALGASKALQFLHEVC 617          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.999e-18
Identity = 51/131 (38.93%), Postives = 78/131 (59.54%), Query Frame = 1
Query:  418 ELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIV-LELSPNGSLASLLYGMK--------EKLKWGIRYKIALGVAEGLLYLHE 783
            EL+  T+NF  + LIG+G Y  VY G L++G+  AIK+L      +   +FL+++ +++ +   N  +LLGY ++GG  ++  E +PNGSL  +L+G K          L W  R KIA+G A+GL YLHE
Sbjct:   60 ELKDITDNFGSKALIGEGSYGRVYHGVLKSGRAAAIKKLDSSKQPD--REFLAQVSMVSRLKDENVVELLGYCVDGGFRVLAYEYAPNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHE 188          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.999e-18
Identity = 59/170 (34.71%), Postives = 86/170 (50.59%), Query Frame = 1
Query:  286 LLTLYPLKLSIRRSSSMREGIDMPRNLFVNSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLY--GMKEKLKWGIRYKIALGVAEGLLYLHEG 786
            LL  Y +   + ++   +  + +    F NS         F    L+ AT+ FS + ++G+GG   V+ G L NG+ VA+KRL   T D  + +F +E+ +++ + H N  KLLG  IEG    +V E  PN SL   L+     + L W  R  I LG AEGL YLH G
Sbjct:  269 LLATYVIMTKVSKTKQEKRNLGLVSRKFNNSKTK------FKYETLEKATDYFSHKKMLGQGGNGTVFLGILPNGKNVAVKRLVFNTRD-WVEEFFNEVNLISGIQHKNLVKLLGCSIEGPESLLVYEYVPNKSLDQFLFDESQSKVLNWSQRLNIILGTAEGLAYLHGG 431          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.916e-18
Identity = 60/184 (32.61%), Postives = 103/184 (55.98%), Query Frame = 1
Query:  247 LFYDLFRNKSKKSLLTLYPLKLSIRRSS-SMREGIDMPRNLFVNSYNSQSPQ-KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHE 783
            + + L++ K K++  +   +  + R  +  M E +   +  F   Y  +  +  +  +  +  AT NFS  N +G+GG+  VYKGRL +G+ +A+KRL++ T+ +   +F++E+ ++A + H N  ++LG  IEG    ++ E   N SL S L+G   + KL W  R+ I  GVA GLLYLH+
Sbjct:  461 IMFCLWKRKQKRAKASAISIANTQRNQNLPMNEMVLSSKREFSGEYKFEELELPLIEMETVVKATENFSSCNKLGQGGFGIVYKGRLLDGKEIAVKRLSK-TSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFGKTRRSKLNWNERFDITNGVARGLLYLHQ 643          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.916e-18
Identity = 52/124 (41.94%), Postives = 79/124 (63.71%), Query Frame = 1
Query:  421 LQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLY--GMKEKLKWGIRYKIALGVAEGLLYLHE 783
            +Q+AT++F   N IG+GG+ EVYKG L +G  VA+KRL++ +    + +F +E+ ++A + H N  +LLG+ ++G   + V E  PN SL   L+    K +L W  RYKI  GVA G+LYLH+
Sbjct:  330 IQTATDDFVESNKIGQGGFGEVYKGTLSDGTEVAVKRLSKSSGQGEV-EFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFLFDPAKKGQLDWTRRYKIIGGVARGILYLHQ 452          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 5.115e-18
Identity = 54/129 (41.86%), Postives = 81/129 (62.79%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLA-SLLYGMKEKLKWGIRYKIALGVAEGLLYLH 780
            K F+  EL  AT+NF+    IG+GGY +VYKG L +G +VAIKR   G+  +   +FL+E+ +++ + H N   LLG+   EG   +V E   NG+L  ++   +KE L + +R +IALG A+G+LYLH
Sbjct:  611 KSFTYAELALATDNFNSSTQIGQGGYGKVYKGTLGSGTVVAIKRAQEGSL-QGEKEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRDNISVKLKEPLDFAMRLRIALGSAKGILYLH 738          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.115e-18
Identity = 53/161 (32.92%), Postives = 90/161 (55.90%), Query Frame = 1
Query:  307 KLSIRRSSSMREGIDMPRNLFVNSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKE--KLKWGIRYKIALGVAEGLLYLH 780
            KL   R    R G  + +        +    +IFS +EL+ AT+NF+   ++G+GG   VYKG L +G++VA+KR ++   ++ + +F++E+ ++A ++H N  KLLG  +E  + + V E  PNG L   L+   +   + W +R  IA+ +A  L YLH
Sbjct:  371 KLIRMRKFFRRNGGMLLKQQLARKEGNVEMSRIFSSHELEKATDNFNKNRVLGQGGQGTVYKGMLVDGRIVAVKR-SKAVDEDRVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLHDESDDYTMTWEVRLHIAIEIAGALSYLH 530          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.115e-18
Identity = 59/155 (38.06%), Postives = 85/155 (54.84%), Query Frame = 1
Query:  355 PRNLFVNSYNSQSPQ------KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLHEGC 789
            P+  F +    + P+      K FSL ELQ AT++FS +N++G+GG+ +VYKGRL +G LVA+KRL           F +E+ +++   H N  +L G+ +      +V     NGS+AS L         L W IR +IALG A GL YLH+ C
Sbjct:  270 PQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLAWSIRQQIALGSARGLSYLHDHC 424          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.115e-18
Identity = 60/164 (36.59%), Postives = 91/164 (55.49%), Query Frame = 1
Query:  307 KLSIRRSSSMREGIDMPRNLFVNSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRL-RNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGM---KEKLKWGIRYKIALGVAEGLLYLHE 783
            KLS + +   +  + +PR+        Q     F+  EL +AT NF  +  +G+GG+  VYKGRL   GQ+VA+K+L R    +   +FL E+ +++ + HPN   L+GY  +G    +V E  P GSL   L+ +   KE L W +R KIA G A+GL +LH+
Sbjct:   46 KLSSKTNGGSKRELLLPRDGL-----GQIAAHTFAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVAVKQLDRNGL-QGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHD 203          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 5.115e-18
Identity = 56/134 (41.79%), Postives = 78/134 (58.21%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLHEGC 789
            K FSL ELQ A++NFS +N++G+GG+ +VYKGRL +G LVA+KRL           F +E+ +++   H N  +L G+ +      +V     NGS+AS L    E    L W  R +IALG A GL YLH+ C
Sbjct:  275 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHC 408          
The following BLAST results are available for this feature:
BLAST of FC929684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
SUB_ARATH2.999e-1836.99Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB ... [more]
PTI1_SOLLC2.999e-1838.93Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
CRK42_ARATH2.999e-1834.71Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
SRK6_BRAOE3.916e-1832.61Putative serine/threonine-protein kinase receptor ... [more]
CRK10_ARATH3.916e-1841.94Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
Y1684_ARATH5.115e-1841.86Probable LRR receptor-like serine/threonine-protei... [more]
WAKLB_ARATH5.115e-1832.92Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
SERK2_ARATH5.115e-1838.06Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
PBS1_ARATH5.115e-1836.59Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
BAK1_ARATH5.115e-1841.79BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1BA07RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1BA07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929684 ID=FC929684; Name=FC929684; organism=Citrus clementina; type=EST; length=789bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAATAAACACA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAATAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTACTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACAATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGT
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