FC929684

Overview
NameFC929684
Unique NameFC929684
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length789
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.315e-17
Identity = 51/143 (35.66%), Postives = 82/143 (57.34%), Query Frame = 1
Query:  388 QSPQ-KIFSLYELQSATNNFSFENLIGKGGYAEVYKG----------RLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLH 780
            +SP  K+++  +L++AT NF  ++++G+GG+ +VY+G          R+ +G +VAIKRL   +     A++ SE+  +  + H N  KLLGY  E   + +V E  P GSL S L+   +   W +R KI +G A GL +LH
Sbjct:   67 ESPNLKVYNFLDLKTATKNFKPDSMLGQGGFGKVYRGWVDATTLAPSRVGSGMIVAIKRLNSESVQGF-AEWRSEVNFLGMLSHRNLVKLLGYCREDKELLLVYEFMPKGSLESHLFRRNDPFPWDLRIKIVIGAARGLAFLH 208          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.315e-17
Identity = 53/147 (36.05%), Postives = 81/147 (55.10%), Query Frame = 1
Query:  364 LFVNSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKEK----LKWGIRYKIALGVAEGLLYLHEGC 789
            L +N    + P +  +   L  ATN FS +++IG GG+ +VYK +L +G +VAIK+L + T  +   +F++E+  +  + H N   LLGY   G    +V E    GSL ++L+   +K    L W  R KIA+G A GL +LH  C
Sbjct:  832 LSINVATFEKPLRKLTFAHLLEATNGFSADSMIGSGGFGDVYKAKLADGSVVAIKKLIQVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKYGSLETVLHEKTKKGGIFLDWSARKKIAIGAARGLAFLHHSC 977          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.315e-17
Identity = 54/148 (36.49%), Postives = 80/148 (54.05%), Query Frame = 1
Query:  364 LFVNSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRL--TRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKE---KLKWGIRYKIALGVAEGLLYLHEGC 789
            L +N    + P +  +  +L  ATN F  ++L+G GG+ +VYK +L++G +VAIK+L    G  D    +F +E+  +  + H N   LLGY   G    +V E    GSL  +L+  K+   KL W  R KIA+G A GL +LH  C
Sbjct:  862 LSINLAAFEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDR---EFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKTGIKLNWPARRKIAIGAARGLAFLHHNC 1006          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.315e-17
Identity = 54/148 (36.49%), Postives = 80/148 (54.05%), Query Frame = 1
Query:  364 LFVNSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRL--TRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKE---KLKWGIRYKIALGVAEGLLYLHEGC 789
            L +N    + P +  +  +L  ATN F  ++L+G GG+ +VYK +L++G +VAIK+L    G  D    +F +E+  +  + H N   LLGY   G    +V E    GSL  +L+  K+   KL W  R KIA+G A GL +LH  C
Sbjct:  862 LSINLAAFEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDR---EFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKIGIKLNWPARRKIAIGAARGLAFLHHNC 1006          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.330e-17
Identity = 58/158 (36.71%), Postives = 92/158 (58.23%), Query Frame = 1
Query:  334 MREGIDMPRNLFVNSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRL----TRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMKEK----LKWGIRYKIALGVAEGLLYLH 780
            + + I   R   +++ ++    +IF+  E+  ATNNFS +NLIG GG+ EV+K  L +G + AIKR     T+GT D+I    L+E+ I+  V+H +  +LLG  ++  + +++ E  PNG+L   L+G  ++    L W  R +IA   AEGL YLH
Sbjct:  327 IHKNIVKEREEMLSANSTGKSSRIFTGREITKATNNFSKDNLIGTGGFGEVFKAVLEDGTITAIKRAKLNNTKGT-DQI----LNEVRILCQVNHRSLVRLLGCCVDLELPLLIYEFIPNGTLFEHLHGSSDRTWKPLTWRRRLQIAYQTAEGLAYLH 479          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.330e-17
Identity = 51/129 (39.53%), Postives = 78/129 (60.47%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHE 783
            F    +++ATN F   N +G+GG+ EVYKG   +G  VA+KRL++ T+ +   +F +E+ ++A + H N  +LLG+ +E    I V E  PN SL   ++   M+  L W  RYKI  G+A G+LYLH+
Sbjct:  339 FDFKAIEAATNKFCETNKLGQGGFGEVYKGIFPSGVQVAVKRLSK-TSGQGEREFANEVIVVAKLQHRNLVRLLGFCLERDERILVYEFVPNKSLDYFIFDSTMQSLLDWTRRYKIIGGIARGILYLHQ 466          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.330e-17
Identity = 55/148 (37.16%), Postives = 79/148 (53.38%), Query Frame = 1
Query:  364 LFVNSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRL--TRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKE---KLKWGIRYKIALGVAEGLLYLHEGC 789
            L +N    + P +  +  +L  ATN F  ++LIG GG+ +VYK  L++G  VAIK+L    G  D    +F++E+  +  + H N   LLGY   G    +V E    GSL  +L+  K+   KL W  R KIA+G A GL +LH  C
Sbjct:  857 LSINLAAFEKPLRKLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKDGSAVAIKKLIHVSGQGDR---EFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAIGSARGLAFLHHNC 1001          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 5.655e-17
Identity = 50/126 (39.68%), Postives = 78/126 (61.90%), Query Frame = 1
Query:  421 LQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLT--RGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHE 783
            ++ ATN+FS +N +G+GG+  VYKG L  G+ +A+KRL+   G  D    +F++E+ ++A + H N  +LLG+ ++G   I++ E   N SL   ++    +  L W  RY+I  GVA GLLYLHE
Sbjct:  337 IRLATNDFSRDNQLGEGGFGAVYKGVLDYGEEIAVKRLSMKSGQGDN---EFINEVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKNTSLDHYIFDSNRRMILDWETRYRIISGVARGLLYLHE 459          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 5.655e-17
Identity = 53/129 (41.09%), Postives = 78/129 (60.47%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHE 783
            F    + +AT+ F   N +G+GG+ EVYKG   +G  VA+KRL++ +  +   +F +E+ ++A + H N  KLLGY +EG   I V E  PN SL   L+   M+ +L W  RYKI  G+A G+LYLH+
Sbjct:  332 FDFKAIVAATDIFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLSKNSG-QGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDYFLFDPTMQGQLDWSRRYKIIGGIARGILYLHQ 459          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: ACCR1_ARATH (Serine/threonine-protein kinase-like protein CCR1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.655e-17
Identity = 52/129 (40.31%), Postives = 72/129 (55.81%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEI-IADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLH 780
            ++F L EL+ ATN F   N +G+G Y  VYK  L +G+ VA+KR    T       +F +EL I+ ++ H N   LLGY  E G   +V E  P+G+L   L+     L W +R KIA+  A+GL YLH
Sbjct:  506 QVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLADGRQVAVKRANAATIIHTNTREFETELEILCNIRHCNIVNLLGYSTEMGERLLVYEYMPHGTLHDHLHSGFSPLSWSLRIKIAMQTAKGLEYLH 634          
The following BLAST results are available for this feature:
BLAST of FC929684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
CX32_ARATH3.315e-1735.66Probable serine/threonine-protein kinase Cx32, chl... [more]
BRL3_ARATH3.315e-1736.05Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
BRI1_SOLPE3.315e-1736.49Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
BRI1_SOLLC3.315e-1736.49Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
WAKLQ_ARATH4.330e-1736.71Wall-associated receptor kinase-like 20 OS=Arabido... [more]
CRK4_ARATH4.330e-1739.53Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
BRI1_ARATH4.330e-1737.16Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
CRK41_ARATH5.655e-1739.68Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CRK20_ARATH5.655e-1741.09Putative cysteine-rich receptor-like protein kinas... [more]
ACCR1_ARATH5.655e-1740.31Serine/threonine-protein kinase-like protein CCR1 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1BA07RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1BA07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929684 ID=FC929684; Name=FC929684; organism=Citrus clementina; type=EST; length=789bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAATAAACACA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAATAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTACTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACAATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGT
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